RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 USHBP1Q8N6Y0 703 aa9.49□□□□□ -0.89
RFC1-215ENST00000512881 CCER1Q8TC90 406 aaPredicted RBP9.49□□□□□ -0.89
RFC1-215ENST00000512881 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
RFC1-215ENST00000512881 PRM3Q9NNZ6 103 aa9.49□□□□□ -0.89
RFC1-215ENST00000512881 RTL1A6NKG5 1358 aa9.49□□□□□ -0.89
RFC1-215ENST00000512881 USP54Q70EL1 1684 aa9.48□□□□□ -0.89
RFC1-215ENST00000512881 MEN1O00255 615 aa9.48□□□□□ -0.89
RFC1-215ENST00000512881 GPC1P35052 558 aa9.48□□□□□ -0.89
RFC1-215ENST00000512881 VAC14Q08AM6 782 aa9.48□□□□□ -0.89
RFC1-215ENST00000512881 RAPGEF4Q8WZA2 1011 aa9.48□□□□□ -0.89
RFC1-215ENST00000512881 SYTL4Q96C24 671 aaPredicted RBP9.48□□□□□ -0.89
RFC1-215ENST00000512881 ARHGEF10LQ9HCE6 1279 aa9.48□□□□□ -0.89
RFC1-215ENST00000512881 RGPD5Q99666 1765 aa9.47□□□□□ -0.89
RFC1-215ENST00000512881 HSPA5P11021 654 aaKnown RBP9.47□□□□□ -0.89
RFC1-215ENST00000512881 TATP17735 454 aaPredicted RBP9.47□□□□□ -0.89
RFC1-215ENST00000512881 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
RFC1-215ENST00000512881 CLN3Q13286 438 aa9.47□□□□□ -0.89
RFC1-215ENST00000512881 LRRC4BQ9NT99 713 aa9.47□□□□□ -0.89
RFC1-215ENST00000512881 CGNL1Q0VF96 1302 aa9.47□□□□□ -0.89
RFC1-215ENST00000512881 INSRP06213 1382 aa9.47□□□□□ -0.89
RFC1-215ENST00000512881 NSD3Q9BZ95 1437 aa9.47□□□□□ -0.89
RFC1-215ENST00000512881 RREB1Q92766 1687 aa9.46□□□□□ -0.89
RFC1-215ENST00000512881 NUP188Q5SRE5 1749 aa9.46□□□□□ -0.89
RFC1-215ENST00000512881 PPM1GO15355 546 aaPredicted RBP9.46□□□□□ -0.9
RFC1-215ENST00000512881 ABL2P42684 1182 aa9.46□□□□□ -0.9
RFC1-215ENST00000512881 PRICKLE2Q7Z3G6 844 aa9.46□□□□□ -0.9
RFC1-215ENST00000512881 PHTF2Q8N3S3 785 aa9.46□□□□□ -0.9
RFC1-215ENST00000512881 FLT4P35916 1363 aa9.46□□□□□ -0.9
RFC1-215ENST00000512881 RHOQP17081 205 aa9.45□□□□□ -0.9
RFC1-215ENST00000512881 ZNF827Q17R98 1081 aa9.45□□□□□ -0.9
RFC1-215ENST00000512881 SLC27A3Q5K4L6 730 aa9.45□□□□□ -0.9
RFC1-215ENST00000512881 RNFT1Q5M7Z0 435 aa9.45□□□□□ -0.9
RFC1-215ENST00000512881 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
RFC1-215ENST00000512881 RAB6BQ9NRW1 208 aa9.45□□□□□ -0.9
RFC1-215ENST00000512881 CUEDC1Q9NWM3 386 aaPredicted RBP9.45□□□□□ -0.9
RFC1-215ENST00000512881 KIF24Q5T7B8 1368 aa9.45□□□□□ -0.9
RFC1-215ENST00000512881 SMG6Q86US8 1419 aaKnown RBP9.45□□□□□ -0.9
RFC1-215ENST00000512881 CDC14CA4D256 554 aa9.44□□□□□ -0.9
RFC1-215ENST00000512881 KCNQ4P56696 695 aa9.44□□□□□ -0.9
RFC1-215ENST00000512881 VWA5B2Q8N398 1253 aa9.44□□□□□ -0.9
RFC1-215ENST00000512881 MTFR1LQ9H019 292 aa9.44□□□□□ -0.9
RFC1-215ENST00000512881 PANK3Q9H999 370 aa9.44□□□□□ -0.9
RFC1-215ENST00000512881 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
RFC1-215ENST00000512881 WASHC2AQ641Q2 1341 aa9.44□□□□□ -0.9
RFC1-215ENST00000512881 MEGF6O75095 1541 aa9.44□□□□□ -0.9
RFC1-215ENST00000512881 SBF2Q86WG5 1849 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 LTN1O94822 1766 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 TNNT2P45379 298 aaPredicted RBP9.43□□□□□ -0.9
RFC1-215ENST00000512881 TSGA10IPQ3SY00 556 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 CNTNAP3BQ96NU0 1288 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 CNTNAP3Q9BZ76 1288 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 GRIP2Q9C0E4 1043 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 DOLKQ9UPQ8 538 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 COG6Q9Y2V7 657 aa9.43□□□□□ -0.9
RFC1-215ENST00000512881 WNK3Q9BYP7 1800 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 NSD2O96028 1365 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 PCDH11XQ9BZA7 1347 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 PCDH11YQ9BZA8 1340 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 CYP27B1O15528 508 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 IL2RAP01589 272 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 NLRP3Q96P20 1036 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 TFCP2L1Q9NZI6 479 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 CCNL1Q9UK58 526 aaPredicted RBP9.42□□□□□ -0.9
RFC1-215ENST00000512881 RGPD3A6NKT7 1758 aaPredicted RBP9.42□□□□□ -0.9
RFC1-215ENST00000512881 RGPD4Q7Z3J3 1758 aa9.42□□□□□ -0.9
RFC1-215ENST00000512881 MYCP01106 439 aaPredicted RBP9.41□□□□□ -0.9
RFC1-215ENST00000512881 GNRH1P01148 92 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 WASHC4Q2M389 1173 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 SLFNL1Q499Z3 407 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 MPRIPQ6WCQ1 1025 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 SV2AQ7L0J3 742 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 RNF135Q8IUD6 432 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 ARXQ96QS3 562 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
RFC1-215ENST00000512881 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 HRH3Q9Y5N1 445 aa9.41□□□□□ -0.9
RFC1-215ENST00000512881 NHSQ6T4R5 1651 aa9.4□□□□□ -0.9
RFC1-215ENST00000512881 SPATA31C2B4DYI2 1134 aa9.4□□□□□ -0.9
RFC1-215ENST00000512881 EIF4A2Q14240 407 aaKnown RBP9.4□□□□□ -0.9
RFC1-215ENST00000512881 ZNF837Q96EG3 531 aaPredicted RBP9.4□□□□□ -0.9
RFC1-215ENST00000512881 SYT17Q9BSW7 474 aa9.4□□□□□ -0.9
RFC1-215ENST00000512881 PNPLA7Q6ZV29 1317 aa9.39□□□□□ -0.91
RFC1-215ENST00000512881 YY1P25490 414 aa9.39□□□□□ -0.91
RFC1-215ENST00000512881 POU4F2Q12837 409 aa9.39□□□□□ -0.91
RFC1-215ENST00000512881 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
RFC1-215ENST00000512881 MORC1Q86VD1 984 aa9.39□□□□□ -0.91
RFC1-215ENST00000512881 NBPF15Q8N660 670 aa9.39□□□□□ -0.91
RFC1-215ENST00000512881 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
RFC1-215ENST00000512881 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
RFC1-215ENST00000512881 FAM208AQ9UK61 1670 aaKnown RBP9.39□□□□□ -0.91
RFC1-215ENST00000512881 UTRNP46939 3433 aa9.38□□□□□ -0.91
RFC1-215ENST00000512881 STAU1O95793 577 aaKnown RBP9.38□□□□□ -0.91
RFC1-215ENST00000512881 POLD1P28340 1107 aa9.38□□□□□ -0.91
RFC1-215ENST00000512881 PIGBQ92521 554 aa9.38□□□□□ -0.91
RFC1-215ENST00000512881 SMARCC1Q92922 1105 aaPredicted RBP9.38□□□□□ -0.91
RFC1-215ENST00000512881 POM121Q96HA1 1249 aa9.38□□□□□ -0.91
RFC1-215ENST00000512881 KNSTRNQ9Y448 316 aa9.38□□□□□ -0.91
RFC1-215ENST00000512881 DYRK1BQ9Y463 629 aa9.38□□□□□ -0.91
RFC1-215ENST00000512881 HMGB2P26583 209 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms