RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MBIPQ9NS73 344 aa10.11□□□□□ -0.79
VCAN-208ENST00000512590 SRGAP1Q7Z6B7 1085 aa10.11□□□□□ -0.79
VCAN-208ENST00000512590 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
VCAN-208ENST00000512590 AGTPBP1Q9UPW5 1226 aa10.11□□□□□ -0.79
VCAN-208ENST00000512590 ELF1P32519 619 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 MTIF3Q9H2K0 278 aaKnown RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 CWC25Q9NXE8 425 aaPredicted RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 POLIQ9UNA4 740 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 CYP7A1P22680 504 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 NAPAP54920 295 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 CHRNA2Q15822 529 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 TMEM67Q5HYA8 995 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 DPP9Q86TI2 863 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 PNMA8AQ86V59 439 aaPredicted RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 IFNLR1Q8IU57 520 aaPredicted RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 IFNL2Q8IZJ0 200 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 DACT3Q96B18 629 aaPredicted RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 ZNF830Q96NB3 372 aaPredicted RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 NOX5Q96PH1 765 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 PYM1Q9BRP8 204 aaKnown RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 UQCRFS1P1P0C7P4 283 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 EXOC4Q96A65 974 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 EVI5LQ96CN4 794 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 ZSCAN31Q96LW9 406 aaPredicted RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 CCNL1Q9UK58 526 aaPredicted RBP10.1□□□□□ -0.79
VCAN-208ENST00000512590 NAIPQ13075 1403 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 M0R2C6 588 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 HSF2BPO75031 334 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 PRPHP41219 470 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 TBCCQ15814 346 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 SPECC1LQ69YQ0 1117 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 CDC37L1Q7L3B6 337 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 TICAM2Q86XR7 235 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 RASAL2Q9UJF2 1139 aa10.1□□□□□ -0.79
VCAN-208ENST00000512590 KRT5P13647 590 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 ARMC9Q7Z3E5 817 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 CNBD1Q8NA66 436 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 ITKQ08881 620 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 SPAG5Q96R06 1193 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 CCDC169A6NNP5 214 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 C16orf72Q14CZ0 275 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 RRS1Q15050 365 aaKnown RBP10.09□□□□□ -0.79
VCAN-208ENST00000512590 TMEM259Q4ZIN3 620 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 NAA16Q6N069 864 aaPredicted RBP10.09□□□□□ -0.79
VCAN-208ENST00000512590 PRPF6O94906 941 aaKnown RBP10.09□□□□□ -0.79
VCAN-208ENST00000512590 NBPF7P0C2Y1 421 aaPredicted RBP10.09□□□□□ -0.79
VCAN-208ENST00000512590 SMTNP53814 917 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 RRP36Q96EU6 259 aaKnown RBP10.09□□□□□ -0.79
VCAN-208ENST00000512590 ALDH3A1P30838 453 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 VPS52Q8N1B4 723 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
VCAN-208ENST00000512590 NUCKS1Q9H1E3 243 aaKnown RBP10.09□□□□□ -0.79
VCAN-208ENST00000512590 KRT19P08727 400 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 KRT9P35527 623 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 PSMD2Q13200 908 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 MAP9Q49MG5 647 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 LRRC59Q96AG4 307 aaKnown RBP10.08□□□□□ -0.8
VCAN-208ENST00000512590 PFDN6O15212 129 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 OSBPP22059 807 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 RNF217Q8TC41 542 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 RPS6KC1Q96S38 1066 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 ANKRD2Q9GZV1 360 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 CCDC160A6NGH7 325 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 DPP8Q6V1X1 898 aaPredicted RBP10.08□□□□□ -0.8
VCAN-208ENST00000512590 PRDM5Q9NQX1 630 aaPredicted RBP10.08□□□□□ -0.8
VCAN-208ENST00000512590 ERCC3P19447 782 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 TTC22Q5TAA0 569 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 SND1Q7KZF4 910 aaKnown RBP eCLIP10.08□□□□□ -0.85e-7■■■■■ 28.2
VCAN-208ENST00000512590 METTL13Q8N6R0 699 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 GBP3Q9H0R5 595 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 GOLGA8CPA6NN73 597 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 MCM3P25205 808 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 HOXD10P28358 340 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 RXRBP28702 533 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 ARID4AP29374 1257 aaPredicted RBP10.08□□□□□ -0.8
VCAN-208ENST00000512590 CKAP4Q07065 602 aaKnown RBP10.08□□□□□ -0.8
VCAN-208ENST00000512590 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 HS2ST1Q7LGA3 356 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 USP21Q9UK80 565 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 IQSEC3Q9UPP2 1182 aaPredicted RBP10.08□□□□□ -0.8
VCAN-208ENST00000512590 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
VCAN-208ENST00000512590 ARHGAP5Q13017 1502 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 GNAQP50148 359 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 CCNA1P78396 465 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 TMTC4Q5T4D3 741 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 IFIT1BQ5T764 474 aaKnown RBP10.07□□□□□ -0.8
VCAN-208ENST00000512590 ORC3Q9UBD5 711 aaPredicted RBP10.07□□□□□ -0.8
VCAN-208ENST00000512590 PPIP5K2O43314 1243 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 WDR48Q8TAF3 677 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 ZCRB1Q8TBF4 217 aaKnown RBP10.07□□□□□ -0.8
VCAN-208ENST00000512590 C22orf23Q9BZE7 217 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 MLXIPQ9HAP2 919 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 IL1RAPL2Q9NP60 686 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 TNIKQ9UKE5 1360 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 MBD3O95983 291 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 MAATS1Q7Z4T9 603 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 BCAR3O75815 825 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 ARPP19P56211 112 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 TNFAIP1Q13829 316 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 GLG1Q92896 1179 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms