RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 PCDHB15Q9Y5E8 787 aa19.56■□□□□ 0.72
SGCA-208ENST00000512526 TFCP2Q12800 502 aa19.55■□□□□ 0.72
SGCA-208ENST00000512526 LPIN2Q92539 896 aa19.55■□□□□ 0.72
SGCA-208ENST00000512526 FAM84BQ96KN1 310 aaPredicted RBP19.55■□□□□ 0.72
SGCA-208ENST00000512526 CHD4Q14839 1912 aa19.55■□□□□ 0.72
SGCA-208ENST00000512526 POTECB2RU33 542 aa19.54■□□□□ 0.72
SGCA-208ENST00000512526 G3V3G9 751 aa19.54■□□□□ 0.72
SGCA-208ENST00000512526 HMMRO75330 724 aa19.54■□□□□ 0.72
SGCA-208ENST00000512526 RAD17O75943 681 aa19.54■□□□□ 0.72
SGCA-208ENST00000512526 DCAF8Q5TAQ9 597 aa19.54■□□□□ 0.72
SGCA-208ENST00000512526 FBXO33Q7Z6M2 555 aa19.54■□□□□ 0.72
SGCA-208ENST00000512526 GPC2Q8N158 579 aa19.54■□□□□ 0.72
SGCA-208ENST00000512526 CD209Q9NNX6 404 aa19.54■□□□□ 0.72
SGCA-208ENST00000512526 KDM2BQ8NHM5 1336 aa19.53■□□□□ 0.72
SGCA-208ENST00000512526 AAMPQ13685 434 aa19.53■□□□□ 0.72
SGCA-208ENST00000512526 CIAPIN1Q6FI81 312 aa19.53■□□□□ 0.72
SGCA-208ENST00000512526 ZNF526Q8TF50 670 aaPredicted RBP19.53■□□□□ 0.72
SGCA-208ENST00000512526 VIL1P09327 827 aaKnown RBP19.52■□□□□ 0.72
SGCA-208ENST00000512526 IFIT1P09914 478 aaKnown RBP19.52■□□□□ 0.72
SGCA-208ENST00000512526 IL1R1P14778 569 aa19.52■□□□□ 0.72
SGCA-208ENST00000512526 HIBADHP31937 336 aaKnown RBP19.52■□□□□ 0.72
SGCA-208ENST00000512526 GYG1P46976 350 aa19.52■□□□□ 0.72
SGCA-208ENST00000512526 TNIP1Q15025 636 aa19.52■□□□□ 0.72
SGCA-208ENST00000512526 EXOC6Q8TAG9 804 aa19.52■□□□□ 0.72
SGCA-208ENST00000512526 L3MBTL3Q96JM7 780 aaPredicted RBP19.52■□□□□ 0.72
SGCA-208ENST00000512526 PSMD14O00487 310 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 SLC5A1P13866 664 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 C1QTNF8P60827 252 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 TIMM10P62072 90 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 ATP2B3Q16720 1220 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 ZNF804AQ7Z570 1209 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 RRAGCQ9HB90 399 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 GPBP1L1Q9HC44 474 aaPredicted RBP19.51■□□□□ 0.71
SGCA-208ENST00000512526 AKAP2Q9Y2D5 859 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 GJA3Q9Y6H8 435 aa19.51■□□□□ 0.71
SGCA-208ENST00000512526 BCAMP50895 628 aa19.5■□□□□ 0.71
SGCA-208ENST00000512526 TDRD7Q8NHU6 1098 aaKnown RBP19.5■□□□□ 0.71
SGCA-208ENST00000512526 NMRK2Q9NPI5 230 aa19.5■□□□□ 0.71
SGCA-208ENST00000512526 GPR108Q9NPR9 543 aa19.5■□□□□ 0.71
SGCA-208ENST00000512526 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
SGCA-208ENST00000512526 SPEF2Q9C093 1822 aa19.5■□□□□ 0.71
SGCA-208ENST00000512526 USP17L3A6NCW0 530 aa19.49■□□□□ 0.71
SGCA-208ENST00000512526 USP17L4A6NCW7 530 aa19.49■□□□□ 0.71
SGCA-208ENST00000512526 OS9Q13438 667 aaPredicted RBP19.49■□□□□ 0.71
SGCA-208ENST00000512526 HSP90AB4PQ58FF6 505 aa19.49■□□□□ 0.71
SGCA-208ENST00000512526 CAVIN4Q5BKX8 364 aa19.49■□□□□ 0.71
SGCA-208ENST00000512526 USP17L1Q7RTZ2 530 aa19.49■□□□□ 0.71
SGCA-208ENST00000512526 A0A1B0GUL7 405 aa19.48■□□□□ 0.71
SGCA-208ENST00000512526 VEGFAP15692 232 aaPredicted RBP19.48■□□□□ 0.71
SGCA-208ENST00000512526 ADORA1P30542 326 aa19.48■□□□□ 0.71
SGCA-208ENST00000512526 SCNN1DP51172 638 aa19.48■□□□□ 0.71
SGCA-208ENST00000512526 DACT2Q5SW24 774 aa19.48■□□□□ 0.71
SGCA-208ENST00000512526 STRIP1Q5VSL9 837 aa19.48■□□□□ 0.71
SGCA-208ENST00000512526 ERC1Q8IUD2 1116 aa19.48■□□□□ 0.71
SGCA-208ENST00000512526 ZBTB12Q9Y330 459 aaPredicted RBP19.48■□□□□ 0.71
SGCA-208ENST00000512526 DICER1Q9UPY3 1922 aaKnown RBP19.48■□□□□ 0.71
SGCA-208ENST00000512526 RAB11FIP3O75154 756 aa19.47■□□□□ 0.71
SGCA-208ENST00000512526 GMPSP49915 693 aaPredicted RBP19.47■□□□□ 0.71
SGCA-208ENST00000512526 IRX6P78412 446 aaPredicted RBP19.47■□□□□ 0.71
SGCA-208ENST00000512526 TTLL5Q6EMB2 1281 aa19.47■□□□□ 0.71
SGCA-208ENST00000512526 RHPN1Q8TCX5 695 aa19.47■□□□□ 0.71
SGCA-208ENST00000512526 DPF2Q92785 391 aa19.47■□□□□ 0.71
SGCA-208ENST00000512526 XAGE2Q96GT9 111 aa19.47■□□□□ 0.71
SGCA-208ENST00000512526 GMLQ99445 158 aa19.47■□□□□ 0.71
SGCA-208ENST00000512526 DCTPP1Q9H773 170 aa19.47■□□□□ 0.71
SGCA-208ENST00000512526 CCDC88AQ3V6T2 1871 aa19.47■□□□□ 0.71
SGCA-208ENST00000512526 KIF3CO14782 793 aa19.46■□□□□ 0.71
SGCA-208ENST00000512526 ZBTB22O15209 634 aa19.46■□□□□ 0.71
SGCA-208ENST00000512526 GTF2IP78347 998 aa19.46■□□□□ 0.71
SGCA-208ENST00000512526 TNNI3KQ59H18 835 aa19.46■□□□□ 0.71
SGCA-208ENST00000512526 RSBN1LQ6PCB5 846 aaPredicted RBP19.46■□□□□ 0.71
SGCA-208ENST00000512526 VPS37DQ86XT2 251 aa19.46■□□□□ 0.71
SGCA-208ENST00000512526 FPGT-TNNI3KV9GXZ4 949 aa19.46■□□□□ 0.71
SGCA-208ENST00000512526 RPS12P25398 132 aaKnown RBP19.45■□□□□ 0.7
SGCA-208ENST00000512526 AGBL3Q8NEM8 1001 aa19.45■□□□□ 0.7
SGCA-208ENST00000512526 EAF2Q96CJ1 260 aaPredicted RBP19.45■□□□□ 0.7
SGCA-208ENST00000512526 NEUROD6Q96NK8 337 aa19.45■□□□□ 0.7
SGCA-208ENST00000512526 GPRC5DQ9NZD1 345 aa19.45■□□□□ 0.7
SGCA-208ENST00000512526 FAM205AQ6ZU69 1335 aa19.45■□□□□ 0.7
SGCA-208ENST00000512526 TIAM2Q8IVF5 1701 aa19.45■□□□□ 0.7
SGCA-208ENST00000512526 IQCA1LA6NCM1 817 aa19.44■□□□□ 0.7
SGCA-208ENST00000512526 EPS15P42566 896 aa19.44■□□□□ 0.7
SGCA-208ENST00000512526 PHKA1P46020 1223 aa19.44■□□□□ 0.7
SGCA-208ENST00000512526 HDAC1Q13547 482 aaPredicted RBP19.44■□□□□ 0.7
SGCA-208ENST00000512526 CCDC102BQ68D86 513 aa19.44■□□□□ 0.7
SGCA-208ENST00000512526 KIF1BPQ96EK5 621 aa19.44■□□□□ 0.7
SGCA-208ENST00000512526 MXD3Q9BW11 206 aa19.44■□□□□ 0.7
SGCA-208ENST00000512526 TAF1DQ9H5J8 278 aaPredicted RBP19.44■□□□□ 0.7
SGCA-208ENST00000512526 HACL1Q9UJ83 578 aa19.44■□□□□ 0.7
SGCA-208ENST00000512526 CEP350Q5VT06 3117 aa19.44■□□□□ 0.7
SGCA-208ENST00000512526 FKBP1AP62942 108 aaKnown RBP19.43■□□□□ 0.7
SGCA-208ENST00000512526 CNOT7Q9UIV1 285 aaKnown RBP19.43■□□□□ 0.7
SGCA-208ENST00000512526 IQSEC3Q9UPP2 1182 aaPredicted RBP19.43■□□□□ 0.7
SGCA-208ENST00000512526 ZNF609O15014 1411 aa19.42■□□□□ 0.7
SGCA-208ENST00000512526 A0A1B0GUL6 1792 aa19.42■□□□□ 0.7
SGCA-208ENST00000512526 CERS5Q8N5B7 392 aa19.42■□□□□ 0.7
SGCA-208ENST00000512526 SHTN1A0MZ66 631 aa19.41■□□□□ 0.7
SGCA-208ENST00000512526 APBB1O00213 710 aa19.41■□□□□ 0.7
SGCA-208ENST00000512526 LMOD1P29536 600 aaPredicted RBP19.41■□□□□ 0.7
SGCA-208ENST00000512526 EPHX2P34913 555 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms