RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 RIPOR2Q9Y4F9 1068 aa19.88■□□□□ 0.77
DDX41-214ENST00000512334 VIL1P09327 827 aaKnown RBP19.87■□□□□ 0.77
DDX41-214ENST00000512334 USP50Q70EL3 339 aaPredicted RBP19.87■□□□□ 0.77
DDX41-214ENST00000512334 ITPRIPQ8IWB1 547 aa19.87■□□□□ 0.77
DDX41-214ENST00000512334 MICALL2Q8IY33 904 aa19.87■□□□□ 0.77
DDX41-214ENST00000512334 CNOT7Q9UIV1 285 aaKnown RBP19.87■□□□□ 0.77
DDX41-214ENST00000512334 RCAN3Q9UKA8 241 aa19.87■□□□□ 0.77
DDX41-214ENST00000512334 USP17L3A6NCW0 530 aa19.86■□□□□ 0.77
DDX41-214ENST00000512334 USP17L4A6NCW7 530 aa19.86■□□□□ 0.77
DDX41-214ENST00000512334 H7C1D1 291 aa19.86■□□□□ 0.77
DDX41-214ENST00000512334 RPS12P25398 132 aaKnown RBP19.86■□□□□ 0.77
DDX41-214ENST00000512334 RFX5P48382 616 aaPredicted RBP19.86■□□□□ 0.77
DDX41-214ENST00000512334 USP17L1Q7RTZ2 530 aa19.86■□□□□ 0.77
DDX41-214ENST00000512334 DPF2Q92785 391 aa19.86■□□□□ 0.77
DDX41-214ENST00000512334 SHTN1A0MZ66 631 aa19.85■□□□□ 0.77
DDX41-214ENST00000512334 GNAI2P04899 355 aa19.85■□□□□ 0.77
DDX41-214ENST00000512334 RLBP1P12271 317 aa19.85■□□□□ 0.77
DDX41-214ENST00000512334 PTPN12Q05209 780 aaKnown RBP19.85■□□□□ 0.77
DDX41-214ENST00000512334 UBE4AQ14139 1066 aa19.85■□□□□ 0.77
DDX41-214ENST00000512334 RSBN1LQ6PCB5 846 aaPredicted RBP19.85■□□□□ 0.77
DDX41-214ENST00000512334 ZNF804AQ7Z570 1209 aa19.85■□□□□ 0.77
DDX41-214ENST00000512334 SIL1Q9H173 461 aa19.85■□□□□ 0.77
DDX41-214ENST00000512334 PSME4Q14997 1843 aa19.84■□□□□ 0.77
DDX41-214ENST00000512334 APLP1P51693 650 aa19.84■□□□□ 0.77
DDX41-214ENST00000512334 MAP1SQ66K74 1059 aaPredicted RBP19.84■□□□□ 0.77
DDX41-214ENST00000512334 C15orf52Q6ZUT6 534 aaKnown RBP19.84■□□□□ 0.77
DDX41-214ENST00000512334 CD209Q9NNX6 404 aa19.84■□□□□ 0.77
DDX41-214ENST00000512334 ADAMTSL1Q8N6G6 1762 aa19.84■□□□□ 0.77
DDX41-214ENST00000512334 IRS2Q9Y4H2 1338 aa19.83■□□□□ 0.77
DDX41-214ENST00000512334 EYA2O00167 538 aa19.83■□□□□ 0.77
DDX41-214ENST00000512334 SRGAP3O43295 1099 aa19.83■□□□□ 0.77
DDX41-214ENST00000512334 PDE8BO95263 885 aa19.82■□□□□ 0.76
DDX41-214ENST00000512334 GTF2IP78347 998 aa19.82■□□□□ 0.76
DDX41-214ENST00000512334 RBM26Q5T8P6 1007 aaKnown RBP19.82■□□□□ 0.76
DDX41-214ENST00000512334 TTLL5Q6EMB2 1281 aa19.82■□□□□ 0.76
DDX41-214ENST00000512334 SAMD7Q7Z3H4 446 aa19.82■□□□□ 0.76
DDX41-214ENST00000512334 AGBL3Q8NEM8 1001 aa19.82■□□□□ 0.76
DDX41-214ENST00000512334 TRPM4Q8TD43 1214 aa19.82■□□□□ 0.76
DDX41-214ENST00000512334 PANK1Q8TE04 598 aa19.82■□□□□ 0.76
DDX41-214ENST00000512334 PA2G4Q9UQ80 394 aaKnown RBP19.82■□□□□ 0.76
DDX41-214ENST00000512334 MS4A1P11836 297 aa19.81■□□□□ 0.76
DDX41-214ENST00000512334 TBC1D10BQ4KMP7 808 aaPredicted RBP19.81■□□□□ 0.76
DDX41-214ENST00000512334 DACT2Q5SW24 774 aa19.81■□□□□ 0.76
DDX41-214ENST00000512334 STRIP1Q5VSL9 837 aa19.81■□□□□ 0.76
DDX41-214ENST00000512334 CNTROBQ8N137 903 aa19.81■□□□□ 0.76
DDX41-214ENST00000512334 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
DDX41-214ENST00000512334 GYG1P46976 350 aa19.8■□□□□ 0.76
DDX41-214ENST00000512334 VPS37DQ86XT2 251 aa19.8■□□□□ 0.76
DDX41-214ENST00000512334 VGLL2Q8N8G2 317 aa19.8■□□□□ 0.76
DDX41-214ENST00000512334 FBXO3Q9UK99 471 aa19.8■□□□□ 0.76
DDX41-214ENST00000512334 CIAO1O76071 339 aa19.79■□□□□ 0.76
DDX41-214ENST00000512334 USP17L8P0C7I0 530 aa19.79■□□□□ 0.76
DDX41-214ENST00000512334 IL1R1P14778 569 aa19.79■□□□□ 0.76
DDX41-214ENST00000512334 HIBADHP31937 336 aaKnown RBP19.79■□□□□ 0.76
DDX41-214ENST00000512334 HIRAP54198 1017 aaPredicted RBP19.79■□□□□ 0.76
DDX41-214ENST00000512334 HTRA3P83110 453 aa19.79■□□□□ 0.76
DDX41-214ENST00000512334 MTX1Q13505 466 aa19.79■□□□□ 0.76
DDX41-214ENST00000512334 PUM3Q15397 648 aaKnown RBP19.79■□□□□ 0.76
DDX41-214ENST00000512334 ATG9AQ7Z3C6 839 aa19.79■□□□□ 0.76
DDX41-214ENST00000512334 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
DDX41-214ENST00000512334 MYO3BQ8WXR4 1341 aa19.78■□□□□ 0.76
DDX41-214ENST00000512334 ZNF609O15014 1411 aa19.78■□□□□ 0.76
DDX41-214ENST00000512334 EGFRP00533 1210 aa19.78■□□□□ 0.76
DDX41-214ENST00000512334 IFIT1P09914 478 aaKnown RBP19.78■□□□□ 0.76
DDX41-214ENST00000512334 IL15P40933 162 aaPredicted RBP19.78■□□□□ 0.76
DDX41-214ENST00000512334 KIF4BQ2VIQ3 1234 aa19.78■□□□□ 0.76
DDX41-214ENST00000512334 CAVIN4Q5BKX8 364 aa19.78■□□□□ 0.76
DDX41-214ENST00000512334 GMLQ99445 158 aa19.78■□□□□ 0.76
DDX41-214ENST00000512334 COPRSQ9NQ92 184 aa19.78■□□□□ 0.76
DDX41-214ENST00000512334 CEP126Q9P2H0 1117 aa19.78■□□□□ 0.76
DDX41-214ENST00000512334 ZBTB7BO15156 539 aaPredicted RBP19.77■□□□□ 0.76
DDX41-214ENST00000512334 ITGBL1O95965 494 aaPredicted RBP19.77■□□□□ 0.76
DDX41-214ENST00000512334 SLC5A1P13866 664 aa19.77■□□□□ 0.76
DDX41-214ENST00000512334 ZC3H15Q8WU90 426 aaKnown RBP19.77■□□□□ 0.76
DDX41-214ENST00000512334 FAM84BQ96KN1 310 aaPredicted RBP19.77■□□□□ 0.76
DDX41-214ENST00000512334 JAG2Q9Y219 1238 aa19.77■□□□□ 0.76
DDX41-214ENST00000512334 ZNF646O15015 1829 aaPredicted RBP19.76■□□□□ 0.75
DDX41-214ENST00000512334 PNMA6EA0A0J9YXQ4 647 aa19.76■□□□□ 0.75
DDX41-214ENST00000512334 ZNF280AP59817 542 aaPredicted RBP19.76■□□□□ 0.75
DDX41-214ENST00000512334 OGFOD1Q8N543 542 aa19.76■□□□□ 0.75
DDX41-214ENST00000512334 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.76■□□□□ 0.75
DDX41-214ENST00000512334 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
DDX41-214ENST00000512334 FRAT2O75474 233 aaPredicted RBP19.75■□□□□ 0.75
DDX41-214ENST00000512334 KIAA0825Q8IV33 1275 aa19.75■□□□□ 0.75
DDX41-214ENST00000512334 TDRD7Q8NHU6 1098 aaKnown RBP19.75■□□□□ 0.75
DDX41-214ENST00000512334 LPIN2Q92539 896 aa19.75■□□□□ 0.75
DDX41-214ENST00000512334 MYOZ2Q9NPC6 264 aa19.75■□□□□ 0.75
DDX41-214ENST00000512334 COG6Q9Y2V7 657 aa19.75■□□□□ 0.75
DDX41-214ENST00000512334 SASH1O94885 1247 aa19.74■□□□□ 0.75
DDX41-214ENST00000512334 FGFR2P21802 821 aa19.74■□□□□ 0.75
DDX41-214ENST00000512334 MVPQ14764 893 aaKnown RBP19.74■□□□□ 0.75
DDX41-214ENST00000512334 ATP2B3Q16720 1220 aa19.74■□□□□ 0.75
DDX41-214ENST00000512334 FBXO33Q7Z6M2 555 aa19.74■□□□□ 0.75
DDX41-214ENST00000512334 PGAP2Q9UHJ9 254 aa19.74■□□□□ 0.75
DDX41-214ENST00000512334 HDAC9Q9UKV0 1011 aa19.74■□□□□ 0.75
DDX41-214ENST00000512334 IQSEC3Q9UPP2 1182 aaPredicted RBP19.74■□□□□ 0.75
DDX41-214ENST00000512334 TRAF5O00463 557 aa19.73■□□□□ 0.75
DDX41-214ENST00000512334 BCAMP50895 628 aa19.73■□□□□ 0.75
DDX41-214ENST00000512334 DCPSQ96C86 337 aaKnown RBP19.73■□□□□ 0.75
DDX41-214ENST00000512334 GLIS2Q9BZE0 524 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms