RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 ITGAEP38570 1179 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 MLLT1Q03111 559 aaPredicted RBP7.77□□□□□ -1.17
MSH3-202ENST00000512258 PCSK7Q16549 785 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 ELMSAN1Q6PJG2 1045 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 IFT43Q96FT9 208 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 SCAPERQ9BY12 1400 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 TRAPPC8Q9Y2L5 1435 aa7.77□□□□□ -1.17
MSH3-202ENST00000512258 RAPGEF3O95398 923 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 IGLV1-40P01703 118 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 HIF1AQ16665 826 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 ZDHHC13Q8IUH4 622 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 PLEKHM2Q8IWE5 1019 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 AFAP1Q8N556 730 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 MRPL18Q9H0U6 180 aaKnown RBP7.76□□□□□ -1.17
MSH3-202ENST00000512258 SMG9Q9H0W8 520 aaKnown RBP7.76□□□□□ -1.17
MSH3-202ENST00000512258 RAXQ9Y2V3 346 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 PTPRKQ15262 1439 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 CFAP74Q9C0B2 1584 aa7.76□□□□□ -1.17
MSH3-202ENST00000512258 ATAD2Q6PL18 1390 aa7.75□□□□□ -1.17
MSH3-202ENST00000512258 TARSP26639 723 aaKnown RBP7.75□□□□□ -1.17
MSH3-202ENST00000512258 INPP5BP32019 993 aa7.75□□□□□ -1.17
MSH3-202ENST00000512258 SIX5Q8N196 739 aa7.75□□□□□ -1.17
MSH3-202ENST00000512258 NGLY1Q96IV0 654 aa7.75□□□□□ -1.17
MSH3-202ENST00000512258 ABCC5O15440 1437 aa7.75□□□□□ -1.17
MSH3-202ENST00000512258 FRMPD1Q5SYB0 1578 aa7.75□□□□□ -1.17
MSH3-202ENST00000512258 ATP1A2P50993 1020 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 MCM6Q14566 821 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 KRT25Q7Z3Z0 450 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 AGGF1Q8N302 714 aaeCLIP7.74□□□□□ -1.17
MSH3-202ENST00000512258 LARGE2Q8N3Y3 721 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 OGFOD1Q8N543 542 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 UBL7Q96S82 380 aaPredicted RBP7.74□□□□□ -1.17
MSH3-202ENST00000512258 COG6Q9Y2V7 657 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 DAPK1P53355 1430 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 POGZQ7Z3K3 1410 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 KIAA1107Q9UPP5 1409 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 DENND4BO75064 1496 aaPredicted RBP7.74□□□□□ -1.17
MSH3-202ENST00000512258 PLEKHH2Q8IVE3 1493 aa7.74□□□□□ -1.17
MSH3-202ENST00000512258 DNMT1P26358 1616 aaKnown RBP7.74□□□□□ -1.17
MSH3-202ENST00000512258 RICTORQ6R327 1708 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 ARHGEF5Q12774 1597 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 USP17L3A6NCW0 530 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 USP17L4A6NCW7 530 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 RTN1Q16799 776 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 USP17L2Q6R6M4 530 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 USP17L1Q7RTZ2 530 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 ADAMTS19Q8TE59 1207 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 KRTAP4-2Q9BYR5 136 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 CCDC141Q6ZP82 1450 aa7.73□□□□□ -1.17
MSH3-202ENST00000512258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.72□□□□□ -1.17
MSH3-202ENST00000512258 KDM6BO15054 1643 aa7.72□□□□□ -1.17
MSH3-202ENST00000512258 SETDB1Q15047 1291 aa7.72□□□□□ -1.17
MSH3-202ENST00000512258 HFE2Q6ZVN8 426 aa7.72□□□□□ -1.17
MSH3-202ENST00000512258 ARMC10Q8N2F6 343 aa7.72□□□□□ -1.17
MSH3-202ENST00000512258 SCG3Q8WXD2 468 aaKnown RBP7.72□□□□□ -1.17
MSH3-202ENST00000512258 UCN2Q96RP3 112 aa7.72□□□□□ -1.17
MSH3-202ENST00000512258 CROCC2H7BZ55 1655 aa7.72□□□□□ -1.17
MSH3-202ENST00000512258 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
MSH3-202ENST00000512258 GSC2O15499 205 aa7.71□□□□□ -1.18
MSH3-202ENST00000512258 SASH3O75995 380 aa7.71□□□□□ -1.18
MSH3-202ENST00000512258 IDH3AP50213 366 aa7.71□□□□□ -1.18
MSH3-202ENST00000512258 NRLP54845 237 aa7.71□□□□□ -1.18
MSH3-202ENST00000512258 TRIM26Q12899 539 aaPredicted RBP7.71□□□□□ -1.18
MSH3-202ENST00000512258 KDM5CP41229 1560 aa7.71□□□□□ -1.18
MSH3-202ENST00000512258 C9orf84Q5VXU9 1444 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 YEATS2Q9ULM3 1422 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 ZNF518AQ6AHZ1 1483 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 ZFYVE16Q7Z3T8 1539 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 PRR19A6NJB7 356 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 JAG1P78504 1218 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.7□□□□□ -1.18
MSH3-202ENST00000512258 DTX1Q86Y01 620 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 GAS2L2Q8NHY3 880 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 C11orf16Q9NQ32 467 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 RRP7BPQ9NSQ0 103 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 ADGRE2Q9UHX3 823 aa7.7□□□□□ -1.18
MSH3-202ENST00000512258 INO80Q9ULG1 1556 aaPredicted RBP7.7□□□□□ -1.18
MSH3-202ENST00000512258 SPAG9O60271 1321 aaKnown RBP7.7□□□□□ -1.18
MSH3-202ENST00000512258 KIDINS220Q9ULH0 1771 aa7.69□□□□□ -1.18
MSH3-202ENST00000512258 PTCD1O75127 700 aaKnown RBP7.69□□□□□ -1.18
MSH3-202ENST00000512258 RARAP10276 462 aa7.69□□□□□ -1.18
MSH3-202ENST00000512258 PLD4Q96BZ4 506 aa7.69□□□□□ -1.18
MSH3-202ENST00000512258 PCGF6Q9BYE7 350 aa7.69□□□□□ -1.18
MSH3-202ENST00000512258 STOML1Q9UBI4 398 aa7.69□□□□□ -1.18
MSH3-202ENST00000512258 SHANK2Q9UPX8 1470 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 ATP7AQ04656 1500 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 HECW2Q9P2P5 1572 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 MAST1Q9Y2H9 1570 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 ABCA6Q8N139 1617 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 TM4SF5O14894 197 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 TSPY4P0CV99 314 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 TSPY10P0CW01 314 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 GLB1P16278 677 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 EPB42P16452 691 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 EIF2AK2P19525 551 aaKnown RBP7.68□□□□□ -1.18
MSH3-202ENST00000512258 ZNF594Q96JF6 807 aaPredicted RBP7.68□□□□□ -1.18
MSH3-202ENST00000512258 SRA1Q9HD15 236 aaKnown RBP7.68□□□□□ -1.18
MSH3-202ENST00000512258 KLK14Q9P0G3 267 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 MKRN1Q9UHC7 482 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms