RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 IQSEC3Q9UPP2 1182 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-214ENST00000512234 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.64
SQSTM1-214ENST00000512234 ZBTB12Q9Y330 459 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-214ENST00000512234 SHTN1A0MZ66 631 aa19.07■□□□□ 0.64
SQSTM1-214ENST00000512234 POTECB2RU33 542 aa19.07■□□□□ 0.64
SQSTM1-214ENST00000512234 APBB1O00213 710 aa19.07■□□□□ 0.64
SQSTM1-214ENST00000512234 SURF6O75683 361 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-214ENST00000512234 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
SQSTM1-214ENST00000512234 PSMD14O00487 310 aa19.06■□□□□ 0.64
SQSTM1-214ENST00000512234 SASH1O94885 1247 aa19.06■□□□□ 0.64
SQSTM1-214ENST00000512234 DPY19L2Q6NUT2 758 aa19.06■□□□□ 0.64
SQSTM1-214ENST00000512234 FBXW7Q969H0 707 aa19.06■□□□□ 0.64
SQSTM1-214ENST00000512234 PCDHB15Q9Y5E8 787 aa19.06■□□□□ 0.64
SQSTM1-214ENST00000512234 MED23Q9ULK4 1368 aa19.06■□□□□ 0.64
SQSTM1-214ENST00000512234 CIAO1O76071 339 aa19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 TIMM10P62072 90 aa19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 VPS33BQ9H267 617 aa19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 CEP126Q9P2H0 1117 aa19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 SCN9AQ15858 1988 aa19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 ADORA1P30542 326 aa19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 IL15P40933 162 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 BCAMP50895 628 aa19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 G3BP1Q13283 466 aaKnown RBP eCLIP19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 FAM84BQ96KN1 310 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-214ENST00000512234 FGFR2P21802 821 aa19.04■□□□□ 0.64
SQSTM1-214ENST00000512234 OS9Q13438 667 aaPredicted RBP19.04■□□□□ 0.64
SQSTM1-214ENST00000512234 UBE4AQ14139 1066 aa19.04■□□□□ 0.64
SQSTM1-214ENST00000512234 CIAPIN1Q6FI81 312 aa19.04■□□□□ 0.64
SQSTM1-214ENST00000512234 CD209Q9NNX6 404 aa19.03■□□□□ 0.64
SQSTM1-214ENST00000512234 KDM2BQ8NHM5 1336 aa19.03■□□□□ 0.64
SQSTM1-214ENST00000512234 ZC3H4Q9UPT8 1303 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-214ENST00000512234 GMPSP49915 693 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-214ENST00000512234 PUM3Q15397 648 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-214ENST00000512234 ATP2B3Q16720 1220 aa19.03■□□□□ 0.64
SQSTM1-214ENST00000512234 POTEIP0CG38 1075 aa19.02■□□□□ 0.63
SQSTM1-214ENST00000512234 POTEJP0CG39 1038 aa19.02■□□□□ 0.63
SQSTM1-214ENST00000512234 EPS15P42566 896 aa19.02■□□□□ 0.63
SQSTM1-214ENST00000512234 RPAP2Q8IXW5 612 aaPredicted RBP19.02■□□□□ 0.63
SQSTM1-214ENST00000512234 GPC2Q8N158 579 aa19.02■□□□□ 0.63
SQSTM1-214ENST00000512234 KIF3CO14782 793 aa19.01■□□□□ 0.63
SQSTM1-214ENST00000512234 SCNN1DP51172 638 aa19.01■□□□□ 0.63
SQSTM1-214ENST00000512234 GTF2IP78347 998 aa19.01■□□□□ 0.63
SQSTM1-214ENST00000512234 COA1Q9GZY4 146 aa19.01■□□□□ 0.63
SQSTM1-214ENST00000512234 HIBADHP31937 336 aaKnown RBP19■□□□□ 0.63
SQSTM1-214ENST00000512234 NEUROD6Q96NK8 337 aa19■□□□□ 0.63
SQSTM1-214ENST00000512234 FBXO3Q9UK99 471 aa19■□□□□ 0.63
SQSTM1-214ENST00000512234 A0A1B0GUL7 405 aa19■□□□□ 0.63
SQSTM1-214ENST00000512234 C15orf52Q6ZUT6 534 aaKnown RBP19■□□□□ 0.63
SQSTM1-214ENST00000512234 ZNF804AQ7Z570 1209 aa19■□□□□ 0.63
SQSTM1-214ENST00000512234 PODNQ7Z5L7 613 aa19■□□□□ 0.63
SQSTM1-214ENST00000512234 LPIN2Q92539 896 aa19■□□□□ 0.63
SQSTM1-214ENST00000512234 IL1RAPL2Q9NP60 686 aa19■□□□□ 0.63
SQSTM1-214ENST00000512234 NOP58Q9Y2X3 529 aaKnown RBP19■□□□□ 0.63
SQSTM1-214ENST00000512234 SLC5A1P13866 664 aa18.99■□□□□ 0.63
SQSTM1-214ENST00000512234 FBXO33Q7Z6M2 555 aa18.99■□□□□ 0.63
SQSTM1-214ENST00000512234 CHMP4BQ9H444 224 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-214ENST00000512234 USP17L3A6NCW0 530 aa18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 USP17L4A6NCW7 530 aa18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 IFIT1P09914 478 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 PHKA1P46020 1223 aa18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 CHAF1AQ13111 956 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 TNIP1Q15025 636 aa18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 TTLL5Q6EMB2 1281 aa18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 USP17L1Q7RTZ2 530 aa18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 VPS37DQ86XT2 251 aa18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 TLR7Q9NYK1 1049 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-214ENST00000512234 EGFRP00533 1210 aa18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 VIL1P09327 827 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 IL1R1P14778 569 aa18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 DACT2Q5SW24 774 aa18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 CERS5Q8N5B7 392 aa18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 XAGE2Q96GT9 111 aa18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 L3MBTL3Q96JM7 780 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 CCDC8Q9H0W5 538 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 SMARCA5O60264 1052 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 VEGFAP15692 232 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 GRIK5Q16478 980 aa18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 EAPPQ56P03 285 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 RBM26Q5T8P6 1007 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 TDRD7Q8NHU6 1098 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-214ENST00000512234 F8W031 263 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 HMMRO75330 724 aa18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 TNNI3KQ59H18 835 aa18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 CAVIN4Q5BKX8 364 aa18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 RSBN1LQ6PCB5 846 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 SAMD7Q7Z3H4 446 aa18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 EAF2Q96CJ1 260 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 DBNDD2Q9BQY9 259 aa18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 TAF1DQ9H5J8 278 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 CNOT7Q9UIV1 285 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 HACL1Q9UJ83 578 aa18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 FPGT-TNNI3KV9GXZ4 949 aa18.96■□□□□ 0.63
SQSTM1-214ENST00000512234 FRAT2O75474 233 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-214ENST00000512234 MICALL2Q8IY33 904 aa18.95■□□□□ 0.62
SQSTM1-214ENST00000512234 GPRC5DQ9NZD1 345 aa18.95■□□□□ 0.62
SQSTM1-214ENST00000512234 WDR90Q96KV7 1748 aa18.95■□□□□ 0.62
SQSTM1-214ENST00000512234 EPHX2P34913 555 aa18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 KIAA0825Q8IV33 1275 aa18.94■□□□□ 0.62
SQSTM1-214ENST00000512234 RHPN1Q8TCX5 695 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms