RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 PLIN1O60240 522 aa20.26■□□□□ 0.83
PDLIM5-216ENST00000511767 USP17L1Q7RTZ2 530 aa20.26■□□□□ 0.83
PDLIM5-216ENST00000511767 MICALL2Q8IY33 904 aa20.26■□□□□ 0.83
PDLIM5-216ENST00000511767 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
PDLIM5-216ENST00000511767 GMLQ99445 158 aa20.26■□□□□ 0.83
PDLIM5-216ENST00000511767 UBTFL1P0CB47 393 aaPredicted RBP20.25■□□□□ 0.83
PDLIM5-216ENST00000511767 KCNJ4P48050 445 aa20.25■□□□□ 0.83
PDLIM5-216ENST00000511767 RFX5P48382 616 aaPredicted RBP20.25■□□□□ 0.83
PDLIM5-216ENST00000511767 RSBN1LQ6PCB5 846 aaPredicted RBP20.25■□□□□ 0.83
PDLIM5-216ENST00000511767 SAMD7Q7Z3H4 446 aa20.25■□□□□ 0.83
PDLIM5-216ENST00000511767 AGBL3Q8NEM8 1001 aa20.25■□□□□ 0.83
PDLIM5-216ENST00000511767 LRRC24Q50LG9 513 aa20.24■□□□□ 0.83
PDLIM5-216ENST00000511767 KLHDC4Q8TBB5 520 aa20.24■□□□□ 0.83
PDLIM5-216ENST00000511767 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
PDLIM5-216ENST00000511767 MEIS3Q99687 375 aa20.24■□□□□ 0.83
PDLIM5-216ENST00000511767 CD209Q9NNX6 404 aa20.24■□□□□ 0.83
PDLIM5-216ENST00000511767 SCN9AQ15858 1988 aa20.23■□□□□ 0.83
PDLIM5-216ENST00000511767 UBE4AQ14139 1066 aa20.23■□□□□ 0.83
PDLIM5-216ENST00000511767 DACT2Q5SW24 774 aa20.23■□□□□ 0.83
PDLIM5-216ENST00000511767 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
PDLIM5-216ENST00000511767 TRPM4Q8TD43 1214 aa20.23■□□□□ 0.83
PDLIM5-216ENST00000511767 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
PDLIM5-216ENST00000511767 EGFRP00533 1210 aa20.22■□□□□ 0.83
PDLIM5-216ENST00000511767 ZNF280AP59817 542 aaPredicted RBP20.22■□□□□ 0.83
PDLIM5-216ENST00000511767 PTPN12Q05209 780 aaKnown RBP20.22■□□□□ 0.83
PDLIM5-216ENST00000511767 STRIP1Q5VSL9 837 aa20.22■□□□□ 0.83
PDLIM5-216ENST00000511767 TTLL5Q6EMB2 1281 aa20.22■□□□□ 0.83
PDLIM5-216ENST00000511767 CLUAP1Q96AJ1 413 aa20.22■□□□□ 0.83
PDLIM5-216ENST00000511767 LRRFIP2Q9Y608 721 aaKnown RBP20.22■□□□□ 0.83
PDLIM5-216ENST00000511767 MROH5Q6ZUA9 1318 aa20.22■□□□□ 0.83
PDLIM5-216ENST00000511767 TBC1D10BQ4KMP7 808 aaPredicted RBP20.21■□□□□ 0.83
PDLIM5-216ENST00000511767 RBM26Q5T8P6 1007 aaKnown RBP20.21■□□□□ 0.83
PDLIM5-216ENST00000511767 MXD3Q9BW11 206 aa20.21■□□□□ 0.83
PDLIM5-216ENST00000511767 ADAMTSL1Q8N6G6 1762 aa20.21■□□□□ 0.83
PDLIM5-216ENST00000511767 GNAI3P08754 354 aa20.2■□□□□ 0.82
PDLIM5-216ENST00000511767 IL1R1P14778 569 aa20.2■□□□□ 0.82
PDLIM5-216ENST00000511767 FMR1Q06787 632 aaKnown RBP eCLIP20.2■□□□□ 0.823e-9■■■■■ 33
PDLIM5-216ENST00000511767 FAM84BQ96KN1 310 aaPredicted RBP20.2■□□□□ 0.82
PDLIM5-216ENST00000511767 CREBZFQ9NS37 354 aa20.2■□□□□ 0.82
PDLIM5-216ENST00000511767 SPEF2Q9C093 1822 aa20.2■□□□□ 0.82
PDLIM5-216ENST00000511767 EYA2O00167 538 aa20.19■□□□□ 0.82
PDLIM5-216ENST00000511767 PDE8BO95263 885 aa20.19■□□□□ 0.82
PDLIM5-216ENST00000511767 USP17L8P0C7I0 530 aa20.19■□□□□ 0.82
PDLIM5-216ENST00000511767 GTF2IP78347 998 aa20.19■□□□□ 0.82
PDLIM5-216ENST00000511767 TMEM57Q8N5G2 664 aa20.19■□□□□ 0.82
PDLIM5-216ENST00000511767 VGLL2Q8N8G2 317 aa20.19■□□□□ 0.82
PDLIM5-216ENST00000511767 KLRG1Q96E93 195 aa20.19■□□□□ 0.82
PDLIM5-216ENST00000511767 ATG9AQ7Z3C6 839 aa20.18■□□□□ 0.82
PDLIM5-216ENST00000511767 TMEM88BA6NKF7 163 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 TRAF5O00463 557 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 SASH1O94885 1247 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 METTL24Q5JXM2 366 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 CST9Q5W186 159 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 CDC37L1Q7L3B6 337 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 ZNF804AQ7Z570 1209 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 FBXO33Q7Z6M2 555 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 FBXO3Q9UK99 471 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 ZNF609O15014 1411 aa20.17■□□□□ 0.82
PDLIM5-216ENST00000511767 HIBADHP31937 336 aaKnown RBP20.16■□□□□ 0.82
PDLIM5-216ENST00000511767 GYG1P46976 350 aa20.16■□□□□ 0.82
PDLIM5-216ENST00000511767 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
PDLIM5-216ENST00000511767 GLIS2Q9BZE0 524 aaPredicted RBP20.16■□□□□ 0.82
PDLIM5-216ENST00000511767 COPRSQ9NQ92 184 aa20.16■□□□□ 0.82
PDLIM5-216ENST00000511767 FGFR2P21802 821 aa20.15■□□□□ 0.82
PDLIM5-216ENST00000511767 MMP14P50281 582 aa20.15■□□□□ 0.82
PDLIM5-216ENST00000511767 SCARF1Q14162 830 aa20.15■□□□□ 0.82
PDLIM5-216ENST00000511767 KIF4BQ2VIQ3 1234 aa20.15■□□□□ 0.82
PDLIM5-216ENST00000511767 DZIP1LQ8IYY4 767 aaKnown RBP20.15■□□□□ 0.82
PDLIM5-216ENST00000511767 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
PDLIM5-216ENST00000511767 MYOZ2Q9NPC6 264 aa20.15■□□□□ 0.82
PDLIM5-216ENST00000511767 MYO3BQ8WXR4 1341 aa20.14■□□□□ 0.81
PDLIM5-216ENST00000511767 ZBTB7BO15156 539 aaPredicted RBP20.14■□□□□ 0.81
PDLIM5-216ENST00000511767 CIAO1O76071 339 aa20.14■□□□□ 0.81
PDLIM5-216ENST00000511767 GNAI2P04899 355 aa20.14■□□□□ 0.81
PDLIM5-216ENST00000511767 RLBP1P12271 317 aa20.14■□□□□ 0.81
PDLIM5-216ENST00000511767 MTX1Q13505 466 aa20.14■□□□□ 0.81
PDLIM5-216ENST00000511767 JMYQ8N9B5 988 aa20.14■□□□□ 0.81
PDLIM5-216ENST00000511767 DLK2Q6UY11 383 aa20.13■□□□□ 0.81
PDLIM5-216ENST00000511767 CERS5Q8N5B7 392 aa20.13■□□□□ 0.81
PDLIM5-216ENST00000511767 PA2G4Q9UQ80 394 aaKnown RBP20.13■□□□□ 0.81
PDLIM5-216ENST00000511767 ASTN2O75129 1339 aaPredicted RBP20.12■□□□□ 0.81
PDLIM5-216ENST00000511767 FAM205AQ6ZU69 1335 aa20.12■□□□□ 0.81
PDLIM5-216ENST00000511767 FKBP1AP62942 108 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-216ENST00000511767 OGFOD1Q8N543 542 aa20.12■□□□□ 0.81
PDLIM5-216ENST00000511767 DCPSQ96C86 337 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-216ENST00000511767 SIL1Q9H173 461 aa20.12■□□□□ 0.81
PDLIM5-216ENST00000511767 POLR2AP24928 1970 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-216ENST00000511767 SRGAP3O43295 1099 aa20.11■□□□□ 0.81
PDLIM5-216ENST00000511767 IL15P40933 162 aaPredicted RBP20.11■□□□□ 0.81
PDLIM5-216ENST00000511767 BCAMP50895 628 aa20.11■□□□□ 0.81
PDLIM5-216ENST00000511767 NBPF9Q3BBW0 867 aa20.11■□□□□ 0.81
PDLIM5-216ENST00000511767 KIAA0825Q8IV33 1275 aa20.11■□□□□ 0.81
PDLIM5-216ENST00000511767 CEP126Q9P2H0 1117 aa20.11■□□□□ 0.81
PDLIM5-216ENST00000511767 PUM3Q15397 648 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-216ENST00000511767 KRT26Q7Z3Y9 468 aa20.1■□□□□ 0.81
PDLIM5-216ENST00000511767 LPIN2Q92539 896 aa20.1■□□□□ 0.81
PDLIM5-216ENST00000511767 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
PDLIM5-216ENST00000511767 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-216ENST00000511767 JAG2Q9Y219 1238 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms