RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 VASH1Q7L8A9 365 aaPredicted RBP8.85□□□□□ -0.99
RAB28-207ENST00000511649 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
RAB28-207ENST00000511649 UBR2Q8IWV8 1755 aa8.85□□□□□ -0.99
RAB28-207ENST00000511649 C10orf71Q711Q0 1435 aa8.85□□□□□ -0.99
RAB28-207ENST00000511649 ATP10DQ9P241 1426 aa8.85□□□□□ -0.99
RAB28-207ENST00000511649 PLEKHG2Q9H7P9 1386 aa8.85□□□□□ -0.99
RAB28-207ENST00000511649 FSHRP23945 695 aa8.84□□□□□ -0.99
RAB28-207ENST00000511649 GRM5P41594 1212 aa8.84□□□□□ -0.99
RAB28-207ENST00000511649 ABL2P42684 1182 aa8.84□□□□□ -0.99
RAB28-207ENST00000511649 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.99
RAB28-207ENST00000511649 NNTQ13423 1086 aa8.84□□□□□ -0.99
RAB28-207ENST00000511649 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
RAB28-207ENST00000511649 HPS1Q92902 700 aa8.84□□□□□ -0.99
RAB28-207ENST00000511649 TMOD3Q9NYL9 352 aa8.84□□□□□ -0.99
RAB28-207ENST00000511649 SPG7Q9UQ90 795 aa8.84□□□□□ -0.99
RAB28-207ENST00000511649 SIPA1L3O60292 1781 aaPredicted RBP8.84□□□□□ -1
RAB28-207ENST00000511649 ST8SIA5O15466 376 aa8.83□□□□□ -1
RAB28-207ENST00000511649 NR5A1Q13285 461 aa8.83□□□□□ -1
RAB28-207ENST00000511649 SMARCC1Q92922 1105 aaPredicted RBP8.83□□□□□ -1
RAB28-207ENST00000511649 POM121Q96HA1 1249 aa8.83□□□□□ -1
RAB28-207ENST00000511649 SSFA2P28290 1259 aa8.82□□□□□ -1
RAB28-207ENST00000511649 C1QTNF8P60827 252 aa8.82□□□□□ -1
RAB28-207ENST00000511649 CTC1Q2NKJ3 1217 aa8.82□□□□□ -1
RAB28-207ENST00000511649 ZNF530Q6P9A1 599 aaPredicted RBP8.82□□□□□ -1
RAB28-207ENST00000511649 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
RAB28-207ENST00000511649 CRIPAKQ8N1N5 446 aa8.82□□□□□ -1
RAB28-207ENST00000511649 CD2APQ9Y5K6 639 aa8.82□□□□□ -1
RAB28-207ENST00000511649 AFDNP55196 1824 aaKnown RBP8.82□□□□□ -1
RAB28-207ENST00000511649 NR3C2P08235 984 aa8.81□□□□□ -1
RAB28-207ENST00000511649 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
RAB28-207ENST00000511649 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
RAB28-207ENST00000511649 SULT6B1Q6IMI4 303 aa8.81□□□□□ -1
RAB28-207ENST00000511649 KCTD15Q96SI1 283 aaPredicted RBP8.81□□□□□ -1
RAB28-207ENST00000511649 LGR6Q9HBX8 967 aa8.81□□□□□ -1
RAB28-207ENST00000511649 SRP68Q9UHB9 627 aaKnown RBP8.81□□□□□ -1
RAB28-207ENST00000511649 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
RAB28-207ENST00000511649 PCDHB9Q9Y5E1 797 aa8.81□□□□□ -1
RAB28-207ENST00000511649 CNTNAP4Q9C0A0 1308 aa8.8□□□□□ -1
RAB28-207ENST00000511649 NRXN2Q9P2S2 1712 aa8.8□□□□□ -1
RAB28-207ENST00000511649 ARFGEF1Q9Y6D6 1849 aa8.8□□□□□ -1
RAB28-207ENST00000511649 MMP10P09238 476 aa8.8□□□□□ -1
RAB28-207ENST00000511649 GYS1P13807 737 aa8.8□□□□□ -1
RAB28-207ENST00000511649 DDR1Q08345 913 aa8.8□□□□□ -1
RAB28-207ENST00000511649 DCAF5Q96JK2 942 aa8.8□□□□□ -1
RAB28-207ENST00000511649 AAASQ9NRG9 546 aa8.8□□□□□ -1
RAB28-207ENST00000511649 ERVV-2B6SEH9 535 aa8.79□□□□□ -1
RAB28-207ENST00000511649 RAD21O60216 631 aa8.79□□□□□ -1
RAB28-207ENST00000511649 VAC14Q08AM6 782 aa8.79□□□□□ -1
RAB28-207ENST00000511649 INTS6LQ5JSJ4 861 aaKnown RBP8.79□□□□□ -1
RAB28-207ENST00000511649 INTS5Q6P9B9 1019 aaKnown RBP8.79□□□□□ -1
RAB28-207ENST00000511649 MORC1Q86VD1 984 aa8.79□□□□□ -1
RAB28-207ENST00000511649 CCER1Q8TC90 406 aaPredicted RBP8.79□□□□□ -1
RAB28-207ENST00000511649 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
RAB28-207ENST00000511649 COL11A2P13942 1736 aaPredicted RBP8.78□□□□□ -1
RAB28-207ENST00000511649 AXIN1O15169 862 aa8.78□□□□□ -1
RAB28-207ENST00000511649 PTCD1O75127 700 aaKnown RBP8.78□□□□□ -1
RAB28-207ENST00000511649 HMOX1P09601 288 aa8.78□□□□□ -1
RAB28-207ENST00000511649 TIMP2P16035 220 aa8.78□□□□□ -1
RAB28-207ENST00000511649 KCNA3P22001 575 aa8.78□□□□□ -1
RAB28-207ENST00000511649 CRKLP46109 303 aaKnown RBP8.78□□□□□ -1
RAB28-207ENST00000511649 MTHFSP49914 203 aa8.78□□□□□ -1
RAB28-207ENST00000511649 SLC39A6Q13433 755 aa8.78□□□□□ -1
RAB28-207ENST00000511649 WASHC4Q2M389 1173 aa8.78□□□□□ -1
RAB28-207ENST00000511649 CCDC116Q8IYX3 515 aa8.78□□□□□ -1
RAB28-207ENST00000511649 NFATC2IPQ8NCF5 419 aa8.78□□□□□ -1
RAB28-207ENST00000511649 FLAD1Q8NFF5 587 aa8.78□□□□□ -1
RAB28-207ENST00000511649 ZNF592Q92610 1267 aa8.78□□□□□ -1
RAB28-207ENST00000511649 DLEC1Q9Y238 1755 aa8.78□□□□□ -1
RAB28-207ENST00000511649 SCN7AQ01118 1682 aa8.78□□□□□ -1
RAB28-207ENST00000511649 SBF1O95248 1867 aa8.77□□□□□ -1.01
RAB28-207ENST00000511649 CARMIL3Q8ND23 1372 aa8.77□□□□□ -1.01
RAB28-207ENST00000511649 SENP3-EIF4A1A0A087X0R7 540 aa8.77□□□□□ -1.01
RAB28-207ENST00000511649 ESPNB1AK53 854 aa8.77□□□□□ -1.01
RAB28-207ENST00000511649 RPS6KA4O75676 772 aa8.77□□□□□ -1.01
RAB28-207ENST00000511649 WDR4P57081 412 aaKnown RBP8.77□□□□□ -1.01
RAB28-207ENST00000511649 MCCD1P59942 119 aaPredicted RBP8.77□□□□□ -1.01
RAB28-207ENST00000511649 MTHFSDQ2M296 383 aaKnown RBP8.77□□□□□ -1.01
RAB28-207ENST00000511649 PLEKHO1Q53GL0 409 aaPredicted RBP8.77□□□□□ -1.01
RAB28-207ENST00000511649 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1.01
RAB28-207ENST00000511649 DNAJC10Q8IXB1 793 aa8.77□□□□□ -1.01
RAB28-207ENST00000511649 CLUAP1Q96AJ1 413 aa8.77□□□□□ -1.01
RAB28-207ENST00000511649 KLF16Q9BXK1 252 aaPredicted RBP8.77□□□□□ -1.01
RAB28-207ENST00000511649 DACH1Q9UI36 760 aa8.77□□□□□ -1.01
RAB28-207ENST00000511649 USP42Q9H9J4 1324 aaKnown RBP8.77□□□□□ -1.01
RAB28-207ENST00000511649 A0A0G2JLW4 131 aa8.76□□□□□ -1.01
RAB28-207ENST00000511649 GIGYF1O75420 1035 aaPredicted RBP8.76□□□□□ -1.01
RAB28-207ENST00000511649 DPEP1P16444 411 aa8.76□□□□□ -1.01
RAB28-207ENST00000511649 CABP4P57796 275 aa8.76□□□□□ -1.01
RAB28-207ENST00000511649 SOS1Q07889 1333 aaPredicted RBP8.76□□□□□ -1.01
RAB28-207ENST00000511649 CAPN5O15484 640 aaPredicted RBP8.75□□□□□ -1.01
RAB28-207ENST00000511649 RNMTO43148 476 aaKnown RBP8.75□□□□□ -1.01
RAB28-207ENST00000511649 GRIN3BO60391 1043 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 PRELPP51888 382 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 AMOTQ4VCS5 1084 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 TRAPPC3LQ5T215 181 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 ZNF526Q8TF50 670 aaPredicted RBP8.75□□□□□ -1.01
RAB28-207ENST00000511649 ITPKCQ96DU7 683 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 SLC52A2Q9HAB3 445 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 ZBTB1Q9Y2K1 713 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms