RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 SPEF2Q9C093 1822 aa29.36■■■□□ 2.29
SMAD5-207ENST00000511116 MLLT1Q03111 559 aaPredicted RBP29.35■■■□□ 2.29
SMAD5-207ENST00000511116 CWF19L2Q2TBE0 894 aaKnown RBP29.35■■■□□ 2.29
SMAD5-207ENST00000511116 CSRNP1Q96S65 589 aa29.35■■■□□ 2.29
SMAD5-207ENST00000511116 PLA2G12BQ9BX93 195 aa29.35■■■□□ 2.29
SMAD5-207ENST00000511116 STK31Q9BXU1 1019 aa29.35■■■□□ 2.29
SMAD5-207ENST00000511116 RNF186Q9NXI6 227 aa29.35■■■□□ 2.29
SMAD5-207ENST00000511116 CCT4P50991 539 aaKnown RBP29.34■■■□□ 2.29
SMAD5-207ENST00000511116 NCBP3Q53F19 620 aaKnown RBP29.34■■■□□ 2.29
SMAD5-207ENST00000511116 DACT2Q5SW24 774 aa29.34■■■□□ 2.29
SMAD5-207ENST00000511116 WWC1Q8IX03 1113 aa29.34■■■□□ 2.29
SMAD5-207ENST00000511116 G2E3Q7L622 706 aa29.33■■■□□ 2.29
SMAD5-207ENST00000511116 RASAL3Q86YV0 1011 aa29.33■■■□□ 2.29
SMAD5-207ENST00000511116 REM2Q8IYK8 340 aaPredicted RBP29.33■■■□□ 2.29
SMAD5-207ENST00000511116 IL16Q14005 1332 aa29.32■■■□□ 2.28
SMAD5-207ENST00000511116 TWISTNBQ3B726 338 aaPredicted RBP29.32■■■□□ 2.28
SMAD5-207ENST00000511116 CASP7P55210 303 aa29.31■■■□□ 2.28
SMAD5-207ENST00000511116 CCDC184Q52MB2 194 aa29.31■■■□□ 2.28
SMAD5-207ENST00000511116 STRIP1Q5VSL9 837 aa29.31■■■□□ 2.28
SMAD5-207ENST00000511116 COA1Q9GZY4 146 aa29.31■■■□□ 2.28
SMAD5-207ENST00000511116 LEMD3Q9Y2U8 911 aa29.31■■■□□ 2.28
SMAD5-207ENST00000511116 MYO3BQ8WXR4 1341 aa29.3■■■□□ 2.28
SMAD5-207ENST00000511116 MMP14P50281 582 aa29.3■■■□□ 2.28
SMAD5-207ENST00000511116 UBE3BQ7Z3V4 1068 aa29.3■■■□□ 2.28
SMAD5-207ENST00000511116 TRPA1O75762 1119 aa29.29■■■□□ 2.28
SMAD5-207ENST00000511116 GCKRQ14397 625 aa29.29■■■□□ 2.28
SMAD5-207ENST00000511116 NBPF9Q3BBW0 867 aa29.29■■■□□ 2.28
SMAD5-207ENST00000511116 TXNRD3Q86VQ6 643 aa29.29■■■□□ 2.28
SMAD5-207ENST00000511116 CACNA1FO60840 1977 aa29.29■■■□□ 2.28
SMAD5-207ENST00000511116 SLC4A2P04920 1241 aa29.28■■■□□ 2.28
SMAD5-207ENST00000511116 CSF1RP07333 972 aa29.28■■■□□ 2.28
SMAD5-207ENST00000511116 MXD3Q9BW11 206 aa29.27■■■□□ 2.28
SMAD5-207ENST00000511116 WNT10BO00744 389 aa29.26■■■□□ 2.27
SMAD5-207ENST00000511116 IGHMBP2P38935 993 aaKnown RBP29.26■■■□□ 2.27
SMAD5-207ENST00000511116 FLIIQ13045 1269 aa29.26■■■□□ 2.27
SMAD5-207ENST00000511116 TNRC18O15417 2968 aaPredicted RBP29.25■■■□□ 2.27
SMAD5-207ENST00000511116 ITGA6P23229 1130 aa29.25■■■□□ 2.27
SMAD5-207ENST00000511116 OGFOD1Q8N543 542 aa29.25■■■□□ 2.27
SMAD5-207ENST00000511116 ANKRD2Q9GZV1 360 aa29.25■■■□□ 2.27
SMAD5-207ENST00000511116 ZNF804BA4D1E1 1349 aa29.24■■■□□ 2.27
SMAD5-207ENST00000511116 ZBED3Q96IU2 234 aaPredicted RBP29.24■■■□□ 2.27
SMAD5-207ENST00000511116 MOB2Q70IA6 237 aa29.23■■■□□ 2.27
SMAD5-207ENST00000511116 LINS1Q8NG48 757 aa29.23■■■□□ 2.27
SMAD5-207ENST00000511116 DNAAF4Q8WXU2 420 aa29.23■■■□□ 2.27
SMAD5-207ENST00000511116 SCAF8Q9UPN6 1271 aaKnown RBP29.23■■■□□ 2.27
SMAD5-207ENST00000511116 IRS2Q9Y4H2 1338 aa29.22■■■□□ 2.27
SMAD5-207ENST00000511116 KLRK1P26718 216 aa29.22■■■□□ 2.27
SMAD5-207ENST00000511116 MYH16Q9H6N6 1097 aa29.22■■■□□ 2.27
SMAD5-207ENST00000511116 SLC34A2O95436 690 aa29.21■■■□□ 2.27
SMAD5-207ENST00000511116 FANCIQ9NVI1 1328 aa29.2■■■□□ 2.27
SMAD5-207ENST00000511116 UBE2Q2LH0YL09 131 aa29.2■■■□□ 2.26
SMAD5-207ENST00000511116 PRAMEF18Q5VWM3 479 aa29.2■■■□□ 2.26
SMAD5-207ENST00000511116 TTLL5Q6EMB2 1281 aa29.2■■■□□ 2.26
SMAD5-207ENST00000511116 PDE4DIPQ5VU43 2346 aa29.2■■■□□ 2.26
SMAD5-207ENST00000511116 C15orf52Q6ZUT6 534 aaKnown RBP29.19■■■□□ 2.26
SMAD5-207ENST00000511116 CTU1Q7Z7A3 348 aaKnown RBP29.19■■■□□ 2.26
SMAD5-207ENST00000511116 MPHOSPH8Q99549 860 aa29.19■■■□□ 2.26
SMAD5-207ENST00000511116 A0A1B0GUL6 1792 aa29.18■■■□□ 2.26
SMAD5-207ENST00000511116 VAMP4O75379 141 aa29.18■■■□□ 2.26
SMAD5-207ENST00000511116 CHRNDQ07001 517 aa29.18■■■□□ 2.26
SMAD5-207ENST00000511116 FKBP5Q13451 457 aaPredicted RBP29.18■■■□□ 2.26
SMAD5-207ENST00000511116 SASH1O94885 1247 aa29.17■■■□□ 2.26
SMAD5-207ENST00000511116 TM4SF4P48230 202 aa29.17■■■□□ 2.26
SMAD5-207ENST00000511116 NOM1Q5C9Z4 860 aaKnown RBP29.16■■■□□ 2.26
SMAD5-207ENST00000511116 APOBEC3FQ8IUX4 373 aaKnown RBP29.16■■■□□ 2.26
SMAD5-207ENST00000511116 FBXW7Q969H0 707 aa29.16■■■□□ 2.26
SMAD5-207ENST00000511116 CD209Q9NNX6 404 aa29.16■■■□□ 2.26
SMAD5-207ENST00000511116 COL1A1P02452 1464 aaPredicted RBP29.16■■■□□ 2.26
SMAD5-207ENST00000511116 NF2P35240 595 aa29.15■■■□□ 2.26
SMAD5-207ENST00000511116 GTF2IP78347 998 aa29.15■■■□□ 2.26
SMAD5-207ENST00000511116 KIAA0825Q8IV33 1275 aa29.15■■■□□ 2.26
SMAD5-207ENST00000511116 WDR63Q8IWG1 891 aa29.15■■■□□ 2.26
SMAD5-207ENST00000511116 HDAC9Q9UKV0 1011 aa29.15■■■□□ 2.26
SMAD5-207ENST00000511116 FOXO4P98177 505 aa29.14■■■□□ 2.26
SMAD5-207ENST00000511116 MTMR14Q8NCE2 650 aa29.14■■■□□ 2.26
SMAD5-207ENST00000511116 ANKRD18BA2A2Z9 1011 aa29.13■■■□□ 2.25
SMAD5-207ENST00000511116 LDLRAD1Q5T700 205 aa29.13■■■□□ 2.25
SMAD5-207ENST00000511116 CFHR5Q9BXR6 569 aa29.13■■■□□ 2.25
SMAD5-207ENST00000511116 BEND3Q5T5X7 828 aa29.12■■■□□ 2.25
SMAD5-207ENST00000511116 CERS5Q8N5B7 392 aa29.12■■■□□ 2.25
SMAD5-207ENST00000511116 PTPN12Q05209 780 aaKnown RBP29.11■■■□□ 2.25
SMAD5-207ENST00000511116 TTLL12Q14166 644 aaPredicted RBP29.11■■■□□ 2.25
SMAD5-207ENST00000511116 ECM29Q5VYK3 1845 aa29.1■■■□□ 2.25
SMAD5-207ENST00000511116 SNAP23O00161 211 aa29.1■■■□□ 2.25
SMAD5-207ENST00000511116 IL1R1P14778 569 aa29.1■■■□□ 2.25
SMAD5-207ENST00000511116 KCNJ4P48050 445 aa29.1■■■□□ 2.25
SMAD5-207ENST00000511116 ARMC9Q7Z3E5 817 aa29.1■■■□□ 2.25
SMAD5-207ENST00000511116 ZNF296Q8WUU4 475 aaPredicted RBP29.1■■■□□ 2.25
SMAD5-207ENST00000511116 FKBP1AP62942 108 aaKnown RBP29.09■■■□□ 2.25
SMAD5-207ENST00000511116 EXOSC9Q06265 439 aaKnown RBP29.09■■■□□ 2.25
SMAD5-207ENST00000511116 IFIT5Q13325 482 aaKnown RBP29.09■■■□□ 2.25
SMAD5-207ENST00000511116 PKN2Q16513 984 aaKnown RBP29.09■■■□□ 2.25
SMAD5-207ENST00000511116 LAMB1P07942 1786 aa29.08■■■□□ 2.25
SMAD5-207ENST00000511116 TBC1D8O95759 1140 aa29.08■■■□□ 2.25
SMAD5-207ENST00000511116 MAP3K11Q16584 847 aa29.08■■■□□ 2.25
SMAD5-207ENST00000511116 SSC5DA1L4H1 1573 aa29.07■■■□□ 2.24
SMAD5-207ENST00000511116 F6X3S4 739 aa29.07■■■□□ 2.24
SMAD5-207ENST00000511116 TAF5LO75529 589 aa29.07■■■□□ 2.24
SMAD5-207ENST00000511116 SREBF2Q12772 1141 aa29.07■■■□□ 2.24
SMAD5-207ENST00000511116 DEFB129Q9H1M3 183 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms