RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
DDX41-212ENST00000511040 MICALL2Q8IY33 904 aa17.47■□□□□ 0.39
DDX41-212ENST00000511040 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
DDX41-212ENST00000511040 CNOT7Q9UIV1 285 aaKnown RBP17.47■□□□□ 0.39
DDX41-212ENST00000511040 HDAC5Q9UQL6 1122 aa17.47■□□□□ 0.39
DDX41-212ENST00000511040 IRS2Q9Y4H2 1338 aa17.47■□□□□ 0.39
DDX41-212ENST00000511040 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.39
DDX41-212ENST00000511040 PTPN12Q05209 780 aaKnown RBP17.46■□□□□ 0.39
DDX41-212ENST00000511040 PODNQ7Z5L7 613 aa17.46■□□□□ 0.39
DDX41-212ENST00000511040 PNMA8AQ86V59 439 aaPredicted RBP17.46■□□□□ 0.39
DDX41-212ENST00000511040 MXD3Q9BW11 206 aa17.46■□□□□ 0.39
DDX41-212ENST00000511040 COA1Q9GZY4 146 aa17.46■□□□□ 0.39
DDX41-212ENST00000511040 SIL1Q9H173 461 aa17.46■□□□□ 0.39
DDX41-212ENST00000511040 MROH5Q6ZUA9 1318 aa17.46■□□□□ 0.38
DDX41-212ENST00000511040 USP17L3A6NCW0 530 aa17.45■□□□□ 0.38
DDX41-212ENST00000511040 USP17L4A6NCW7 530 aa17.45■□□□□ 0.38
DDX41-212ENST00000511040 GNAI2P04899 355 aa17.45■□□□□ 0.38
DDX41-212ENST00000511040 MAP1SQ66K74 1059 aaPredicted RBP17.45■□□□□ 0.38
DDX41-212ENST00000511040 USP17L1Q7RTZ2 530 aa17.45■□□□□ 0.38
DDX41-212ENST00000511040 TRPM4Q8TD43 1214 aa17.45■□□□□ 0.38
DDX41-212ENST00000511040 ADARB2Q9NS39 739 aaKnown RBP17.45■□□□□ 0.38
DDX41-212ENST00000511040 PA2G4Q9UQ80 394 aaKnown RBP17.45■□□□□ 0.38
DDX41-212ENST00000511040 H7C1D1 291 aa17.44■□□□□ 0.38
DDX41-212ENST00000511040 EYA2O00167 538 aa17.44■□□□□ 0.38
DDX41-212ENST00000511040 HTRA3P83110 453 aa17.44■□□□□ 0.38
DDX41-212ENST00000511040 RSBN1LQ6PCB5 846 aaPredicted RBP17.44■□□□□ 0.38
DDX41-212ENST00000511040 C15orf52Q6ZUT6 534 aaKnown RBP17.44■□□□□ 0.38
DDX41-212ENST00000511040 SAMD7Q7Z3H4 446 aa17.44■□□□□ 0.38
DDX41-212ENST00000511040 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
DDX41-212ENST00000511040 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
DDX41-212ENST00000511040 ADAMTSL1Q8N6G6 1762 aa17.43■□□□□ 0.38
DDX41-212ENST00000511040 SRGAP3O43295 1099 aa17.43■□□□□ 0.38
DDX41-212ENST00000511040 RPS12P25398 132 aaKnown RBP17.43■□□□□ 0.38
DDX41-212ENST00000511040 GYG1P46976 350 aa17.43■□□□□ 0.38
DDX41-212ENST00000511040 HIRAP54198 1017 aaPredicted RBP17.43■□□□□ 0.38
DDX41-212ENST00000511040 UBE4AQ14139 1066 aa17.43■□□□□ 0.38
DDX41-212ENST00000511040 TBC1D10BQ4KMP7 808 aaPredicted RBP17.43■□□□□ 0.38
DDX41-212ENST00000511040 RBM26Q5T8P6 1007 aaKnown RBP17.43■□□□□ 0.38
DDX41-212ENST00000511040 USP50Q70EL3 339 aaPredicted RBP17.43■□□□□ 0.38
DDX41-212ENST00000511040 ZNF804AQ7Z570 1209 aa17.43■□□□□ 0.38
DDX41-212ENST00000511040 DPF2Q92785 391 aa17.43■□□□□ 0.38
DDX41-212ENST00000511040 PSME4Q14997 1843 aa17.42■□□□□ 0.38
DDX41-212ENST00000511040 PDE8BO95263 885 aa17.42■□□□□ 0.38
DDX41-212ENST00000511040 EGFRP00533 1210 aa17.42■□□□□ 0.38
DDX41-212ENST00000511040 GTF2IP78347 998 aa17.42■□□□□ 0.38
DDX41-212ENST00000511040 DACT2Q5SW24 774 aa17.42■□□□□ 0.38
DDX41-212ENST00000511040 ATG9AQ7Z3C6 839 aa17.42■□□□□ 0.38
DDX41-212ENST00000511040 VGLL2Q8N8G2 317 aa17.42■□□□□ 0.38
DDX41-212ENST00000511040 JAG2Q9Y219 1238 aa17.42■□□□□ 0.38
DDX41-212ENST00000511040 APLP1P51693 650 aa17.41■□□□□ 0.38
DDX41-212ENST00000511040 TTLL5Q6EMB2 1281 aa17.41■□□□□ 0.38
DDX41-212ENST00000511040 CNTROBQ8N137 903 aa17.41■□□□□ 0.38
DDX41-212ENST00000511040 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
DDX41-212ENST00000511040 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
DDX41-212ENST00000511040 ITGBL1O95965 494 aaPredicted RBP17.4■□□□□ 0.38
DDX41-212ENST00000511040 STRIP1Q5VSL9 837 aa17.4■□□□□ 0.38
DDX41-212ENST00000511040 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
DDX41-212ENST00000511040 FAM84BQ96KN1 310 aaPredicted RBP17.4■□□□□ 0.38
DDX41-212ENST00000511040 GMLQ99445 158 aa17.4■□□□□ 0.38
DDX41-212ENST00000511040 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
DDX41-212ENST00000511040 CIAO1O76071 339 aa17.39■□□□□ 0.37
DDX41-212ENST00000511040 USP17L8P0C7I0 530 aa17.39■□□□□ 0.37
DDX41-212ENST00000511040 IL1R1P14778 569 aa17.39■□□□□ 0.37
DDX41-212ENST00000511040 HIBADHP31937 336 aaKnown RBP17.39■□□□□ 0.37
DDX41-212ENST00000511040 MTX1Q13505 466 aa17.39■□□□□ 0.37
DDX41-212ENST00000511040 PUM3Q15397 648 aaKnown RBP17.39■□□□□ 0.37
DDX41-212ENST00000511040 IQSEC3Q9UPP2 1182 aaPredicted RBP17.39■□□□□ 0.37
DDX41-212ENST00000511040 ZNF646O15015 1829 aaPredicted RBP17.39■□□□□ 0.37
DDX41-212ENST00000511040 TRAF5O00463 557 aa17.38■□□□□ 0.37
DDX41-212ENST00000511040 ZNF280AP59817 542 aaPredicted RBP17.38■□□□□ 0.37
DDX41-212ENST00000511040 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDX41-212ENST00000511040 KIF4BQ2VIQ3 1234 aa17.38■□□□□ 0.37
DDX41-212ENST00000511040 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
DDX41-212ENST00000511040 VPS37DQ86XT2 251 aa17.38■□□□□ 0.37
DDX41-212ENST00000511040 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
DDX41-212ENST00000511040 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
DDX41-212ENST00000511040 IFIT1P09914 478 aaKnown RBP17.37■□□□□ 0.37
DDX41-212ENST00000511040 MS4A1P11836 297 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 FGFR2P21802 821 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 IL15P40933 162 aaPredicted RBP17.37■□□□□ 0.37
DDX41-212ENST00000511040 BCAMP50895 628 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 FBXO33Q7Z6M2 555 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 KIAA0825Q8IV33 1275 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 CERS5Q8N5B7 392 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 ASTN2O75129 1339 aaPredicted RBP17.37■□□□□ 0.37
DDX41-212ENST00000511040 PASKQ96RG2 1323 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 ZNF609O15014 1411 aa17.37■□□□□ 0.37
DDX41-212ENST00000511040 SLC5A1P13866 664 aa17.36■□□□□ 0.37
DDX41-212ENST00000511040 MVPQ14764 893 aaKnown RBP17.36■□□□□ 0.37
DDX41-212ENST00000511040 CAVIN4Q5BKX8 364 aa17.36■□□□□ 0.37
DDX41-212ENST00000511040 TDRD7Q8NHU6 1098 aaKnown RBP17.36■□□□□ 0.37
DDX41-212ENST00000511040 GLIS2Q9BZE0 524 aaPredicted RBP17.36■□□□□ 0.37
DDX41-212ENST00000511040 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
DDX41-212ENST00000511040 ATP8B2P98198 1209 aa17.35■□□□□ 0.37
DDX41-212ENST00000511040 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
DDX41-212ENST00000511040 ATP2B3Q16720 1220 aa17.35■□□□□ 0.37
DDX41-212ENST00000511040 DLK2Q6UY11 383 aa17.35■□□□□ 0.37
DDX41-212ENST00000511040 LPIN2Q92539 896 aa17.35■□□□□ 0.37
DDX41-212ENST00000511040 MYOZ2Q9NPC6 264 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms