RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 FBXW7Q969H0 707 aa19.16■□□□□ 0.66
COL1A1-212ENST00000510710 STK31Q9BXU1 1019 aa19.16■□□□□ 0.66
COL1A1-212ENST00000510710 GREM2Q9H772 168 aa19.16■□□□□ 0.66
COL1A1-212ENST00000510710 MINPP1Q9UNW1 487 aa19.16■□□□□ 0.66
COL1A1-212ENST00000510710 PITPNM2Q9BZ72 1349 aa19.16■□□□□ 0.66
COL1A1-212ENST00000510710 PSME4Q14997 1843 aa19.16■□□□□ 0.66
COL1A1-212ENST00000510710 WTIPA6NIX2 430 aaPredicted RBP19.15■□□□□ 0.66
COL1A1-212ENST00000510710 SCAF8Q9UPN6 1271 aaKnown RBP19.15■□□□□ 0.66
COL1A1-212ENST00000510710 CCT4P50991 539 aaKnown RBP19.14■□□□□ 0.65
COL1A1-212ENST00000510710 OGFOD1Q8N543 542 aa19.14■□□□□ 0.65
COL1A1-212ENST00000510710 MED23Q9ULK4 1368 aa19.14■□□□□ 0.65
COL1A1-212ENST00000510710 CWF19L2Q2TBE0 894 aaKnown RBP19.13■□□□□ 0.65
COL1A1-212ENST00000510710 NBPF9Q3BBW0 867 aa19.13■□□□□ 0.65
COL1A1-212ENST00000510710 TSR2Q969E8 191 aaKnown RBP19.13■□□□□ 0.65
COL1A1-212ENST00000510710 MXD3Q9BW11 206 aa19.13■□□□□ 0.65
COL1A1-212ENST00000510710 PAPPA2Q9BXP8 1791 aa19.12■□□□□ 0.65
COL1A1-212ENST00000510710 NEURL1BA8MQ27 555 aa19.12■□□□□ 0.65
COL1A1-212ENST00000510710 IGHMBP2P38935 993 aaKnown RBP19.12■□□□□ 0.65
COL1A1-212ENST00000510710 TTLL12Q14166 644 aaPredicted RBP19.12■□□□□ 0.65
COL1A1-212ENST00000510710 PRAMEF18Q5VWM3 479 aa19.12■□□□□ 0.65
COL1A1-212ENST00000510710 MOB2Q70IA6 237 aa19.12■□□□□ 0.65
COL1A1-212ENST00000510710 COA1Q9GZY4 146 aa19.12■□□□□ 0.65
COL1A1-212ENST00000510710 MYO3BQ8WXR4 1341 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 UBE2Q2LH0YL09 131 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 SLC34A2O95436 690 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 DACT2Q5SW24 774 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 STRIP1Q5VSL9 837 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 UBE3BQ7Z3V4 1068 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 LEMD3Q9Y2U8 911 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 MYH3P11055 1940 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 SPEF2Q9C093 1822 aa19.11■□□□□ 0.65
COL1A1-212ENST00000510710 H7C1W4 665 aa19.1■□□□□ 0.65
COL1A1-212ENST00000510710 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
COL1A1-212ENST00000510710 NF2P35240 595 aa19.1■□□□□ 0.65
COL1A1-212ENST00000510710 TWISTNBQ3B726 338 aaPredicted RBP19.1■□□□□ 0.65
COL1A1-212ENST00000510710 CTU1Q7Z7A3 348 aaKnown RBP19.1■□□□□ 0.65
COL1A1-212ENST00000510710 WNT10BO00744 389 aa19.09■□□□□ 0.65
COL1A1-212ENST00000510710 TTLL5Q6EMB2 1281 aa19.09■□□□□ 0.65
COL1A1-212ENST00000510710 G2E3Q7L622 706 aa19.09■□□□□ 0.65
COL1A1-212ENST00000510710 TXNRD3Q86VQ6 643 aa19.09■□□□□ 0.65
COL1A1-212ENST00000510710 MPHOSPH8Q99549 860 aa19.09■□□□□ 0.65
COL1A1-212ENST00000510710 ANKRD2Q9GZV1 360 aa19.09■□□□□ 0.65
COL1A1-212ENST00000510710 ZNF804BA4D1E1 1349 aa19.08■□□□□ 0.65
COL1A1-212ENST00000510710 ITGA6P23229 1130 aa19.08■□□□□ 0.64
COL1A1-212ENST00000510710 MMP14P50281 582 aa19.08■□□□□ 0.64
COL1A1-212ENST00000510710 SOX10P56693 466 aa19.08■□□□□ 0.64
COL1A1-212ENST00000510710 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
COL1A1-212ENST00000510710 HDAC9Q9UKV0 1011 aa19.08■□□□□ 0.64
COL1A1-212ENST00000510710 SASH1O94885 1247 aa19.07■□□□□ 0.64
COL1A1-212ENST00000510710 TBC1D8O95759 1140 aa19.07■□□□□ 0.64
COL1A1-212ENST00000510710 KCNJ4P48050 445 aa19.07■□□□□ 0.64
COL1A1-212ENST00000510710 GCKRQ14397 625 aa19.07■□□□□ 0.64
COL1A1-212ENST00000510710 CCDC27Q2M243 656 aa19.07■□□□□ 0.64
COL1A1-212ENST00000510710 WWC1Q8IX03 1113 aa19.07■□□□□ 0.64
COL1A1-212ENST00000510710 PLA2G12BQ9BX93 195 aa19.07■□□□□ 0.64
COL1A1-212ENST00000510710 KIAA0825Q8IV33 1275 aa19.06■□□□□ 0.64
COL1A1-212ENST00000510710 MYH16Q9H6N6 1097 aa19.06■□□□□ 0.64
COL1A1-212ENST00000510710 GTF2IP78347 998 aa19.05■□□□□ 0.64
COL1A1-212ENST00000510710 FLIIQ13045 1269 aa19.05■□□□□ 0.64
COL1A1-212ENST00000510710 MKRN3Q13064 507 aaKnown RBP19.05■□□□□ 0.64
COL1A1-212ENST00000510710 ARMC9Q7Z3E5 817 aa19.05■□□□□ 0.64
COL1A1-212ENST00000510710 APOBEC3FQ8IUX4 373 aaKnown RBP19.05■□□□□ 0.64
COL1A1-212ENST00000510710 CSF1RP07333 972 aa19.04■□□□□ 0.64
COL1A1-212ENST00000510710 KLRK1P26718 216 aa19.04■□□□□ 0.64
COL1A1-212ENST00000510710 TM4SF4P48230 202 aa19.04■□□□□ 0.64
COL1A1-212ENST00000510710 CHRNDQ07001 517 aa19.04■□□□□ 0.64
COL1A1-212ENST00000510710 FKBP5Q13451 457 aaPredicted RBP19.04■□□□□ 0.64
COL1A1-212ENST00000510710 PRKG1Q13976 671 aa19.04■□□□□ 0.64
COL1A1-212ENST00000510710 PKN2Q16513 984 aaKnown RBP19.04■□□□□ 0.64
COL1A1-212ENST00000510710 ZNF296Q8WUU4 475 aaPredicted RBP19.04■□□□□ 0.64
COL1A1-212ENST00000510710 ANKRD18BA2A2Z9 1011 aa19.03■□□□□ 0.64
COL1A1-212ENST00000510710 CASP7P55210 303 aa19.03■□□□□ 0.64
COL1A1-212ENST00000510710 PTPN12Q05209 780 aaKnown RBP19.03■□□□□ 0.64
COL1A1-212ENST00000510710 DNAAF4Q8WXU2 420 aa19.03■□□□□ 0.64
COL1A1-212ENST00000510710 HPS5Q9UPZ3 1129 aa19.03■□□□□ 0.64
COL1A1-212ENST00000510710 ZNF646O15015 1829 aaPredicted RBP19.02■□□□□ 0.64
COL1A1-212ENST00000510710 SREBF2Q12772 1141 aa19.02■□□□□ 0.64
COL1A1-212ENST00000510710 LINS1Q8NG48 757 aa19.02■□□□□ 0.64
COL1A1-212ENST00000510710 CD209Q9NNX6 404 aa19.02■□□□□ 0.64
COL1A1-212ENST00000510710 IL16Q14005 1332 aa19.01■□□□□ 0.63
COL1A1-212ENST00000510710 GPR25O00155 361 aa19.01■□□□□ 0.63
COL1A1-212ENST00000510710 DLGAP5Q15398 846 aa19.01■□□□□ 0.63
COL1A1-212ENST00000510710 ANGEL1Q9UNK9 670 aaKnown RBP19.01■□□□□ 0.63
COL1A1-212ENST00000510710 TAF5LO75529 589 aa19■□□□□ 0.63
COL1A1-212ENST00000510710 ZBED3Q96IU2 234 aaPredicted RBP19■□□□□ 0.63
COL1A1-212ENST00000510710 CHMP3Q9Y3E7 222 aa19■□□□□ 0.63
COL1A1-212ENST00000510710 IFIT5Q13325 482 aaKnown RBP18.99■□□□□ 0.63
COL1A1-212ENST00000510710 NOM1Q5C9Z4 860 aaKnown RBP18.99■□□□□ 0.63
COL1A1-212ENST00000510710 HELBQ8NG08 1087 aaPredicted RBP18.99■□□□□ 0.63
COL1A1-212ENST00000510710 DEFB129Q9H1M3 183 aa18.99■□□□□ 0.63
COL1A1-212ENST00000510710 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.99■□□□□ 0.63
COL1A1-212ENST00000510710 SNAP23O00161 211 aa18.98■□□□□ 0.63
COL1A1-212ENST00000510710 LDLRAD1Q5T700 205 aa18.98■□□□□ 0.63
COL1A1-212ENST00000510710 SPRYD7Q5W111 196 aa18.98■□□□□ 0.63
COL1A1-212ENST00000510710 SLC10A4Q96EP9 437 aa18.98■□□□□ 0.63
COL1A1-212ENST00000510710 FANCIQ9NVI1 1328 aa18.98■□□□□ 0.63
COL1A1-212ENST00000510710 F8W031 263 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-212ENST00000510710 MYO1BO43795 1136 aa18.97■□□□□ 0.63
COL1A1-212ENST00000510710 FKTNO75072 461 aa18.97■□□□□ 0.63
COL1A1-212ENST00000510710 VAMP4O75379 141 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms