RNA–Protein interactions for RNA: ENST00000509980.5

EXOSC9-208, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 1,317 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-208ENST00000509980 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
EXOSC9-208ENST00000509980 ZNF333Q96JL9 665 aa13.68□□□□□ -0.22
EXOSC9-208ENST00000509980 PLEKHF1Q96S99 279 aa13.68□□□□□ -0.22
EXOSC9-208ENST00000509980 TSPYL4Q9UJ04 414 aa13.68□□□□□ -0.22
EXOSC9-208ENST00000509980 GGA1Q9UJY5 639 aa13.68□□□□□ -0.22
EXOSC9-208ENST00000509980 PRKG1Q13976 671 aa13.67□□□□□ -0.22
EXOSC9-208ENST00000509980 NFE2L2Q16236 605 aa13.67□□□□□ -0.22
EXOSC9-208ENST00000509980 SLC17A8Q8NDX2 589 aa13.67□□□□□ -0.22
EXOSC9-208ENST00000509980 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
EXOSC9-208ENST00000509980 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
EXOSC9-208ENST00000509980 ANKIB1Q9P2G1 1089 aa13.67□□□□□ -0.22
EXOSC9-208ENST00000509980 A0A0C4DFX4 3053 aa13.67□□□□□ -0.22
EXOSC9-208ENST00000509980 ZBTB48P10074 688 aaPredicted RBP13.66□□□□□ -0.22
EXOSC9-208ENST00000509980 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
EXOSC9-208ENST00000509980 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
EXOSC9-208ENST00000509980 COL6A3P12111 3177 aa13.66□□□□□ -0.22
EXOSC9-208ENST00000509980 IRS4O14654 1257 aaPredicted RBP13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 NEFMP07197 916 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 CRHR2Q13324 411 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 MAP3K11Q16584 847 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 DACT2Q5SW24 774 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 SSC5DA1L4H1 1573 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 ECM29Q5VYK3 1845 aa13.65□□□□□ -0.22
EXOSC9-208ENST00000509980 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 SP3Q02447 781 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 RTL5Q5HYW3 569 aaPredicted RBP13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 WNK4Q96J92 1243 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 MXD3Q9BW11 206 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 BABAM1Q9NWV8 329 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 COL1A1P02452 1464 aaPredicted RBP13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 XDHP47989 1333 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 SASH1O94885 1247 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 TRIM28Q13263 835 aaKnown RBP13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 APOBEC3FQ8IUX4 373 aaKnown RBP13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 SLC10A4Q96EP9 437 aa13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 ZBED3Q96IU2 234 aaPredicted RBP13.64□□□□□ -0.23
EXOSC9-208ENST00000509980 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
EXOSC9-208ENST00000509980 MMP14P50281 582 aa13.63□□□□□ -0.23
EXOSC9-208ENST00000509980 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
EXOSC9-208ENST00000509980 CLMNQ96JQ2 1002 aa13.63□□□□□ -0.23
EXOSC9-208ENST00000509980 PTPN18Q99952 460 aa13.63□□□□□ -0.23
EXOSC9-208ENST00000509980 PRO3102Q9H379 93 aa13.63□□□□□ -0.23
EXOSC9-208ENST00000509980 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
EXOSC9-208ENST00000509980 OTOFQ9HC10 1997 aa13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 MED23Q9ULK4 1368 aa13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 WTIPA6NIX2 430 aaPredicted RBP13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 UNCXA6NJT0 531 aa13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 ATP2B4P23634 1241 aa13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 STRIP1Q5VSL9 837 aa13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 CHPF2Q9P2E5 772 aa13.62□□□□□ -0.23
EXOSC9-208ENST00000509980 SPEF2Q9C093 1822 aa13.61□□□□□ -0.23
EXOSC9-208ENST00000509980 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
EXOSC9-208ENST00000509980 GJA5P36382 358 aa13.61□□□□□ -0.23
EXOSC9-208ENST00000509980 TRIM26Q12899 539 aaPredicted RBP13.61□□□□□ -0.23
EXOSC9-208ENST00000509980 SLC4A8Q2Y0W8 1093 aa13.61□□□□□ -0.23
EXOSC9-208ENST00000509980 OTUD7BQ6GQQ9 843 aa13.61□□□□□ -0.23
EXOSC9-208ENST00000509980 PTCH2Q9Y6C5 1203 aa13.61□□□□□ -0.23
EXOSC9-208ENST00000509980 ZSWIM8A7E2V4 1837 aa13.6□□□□□ -0.23
EXOSC9-208ENST00000509980 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
EXOSC9-208ENST00000509980 ZBTB38Q8NAP3 1195 aaPredicted RBP13.6□□□□□ -0.23
EXOSC9-208ENST00000509980 DEFB129Q9H1M3 183 aa13.6□□□□□ -0.23
EXOSC9-208ENST00000509980 PPP1R12BO60237 982 aaPredicted RBP13.59□□□□□ -0.23
EXOSC9-208ENST00000509980 CCDC152Q4G0S7 254 aa13.59□□□□□ -0.23
EXOSC9-208ENST00000509980 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
EXOSC9-208ENST00000509980 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
EXOSC9-208ENST00000509980 HSP90B1P14625 803 aaKnown RBP13.58□□□□□ -0.24
EXOSC9-208ENST00000509980 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
EXOSC9-208ENST00000509980 COA1Q9GZY4 146 aa13.58□□□□□ -0.24
EXOSC9-208ENST00000509980 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
EXOSC9-208ENST00000509980 PPP2R3BQ9Y5P8 575 aa13.58□□□□□ -0.24
EXOSC9-208ENST00000509980 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
EXOSC9-208ENST00000509980 MYH3P11055 1940 aa13.57□□□□□ -0.24
EXOSC9-208ENST00000509980 PDE8AO60658 829 aa13.57□□□□□ -0.24
EXOSC9-208ENST00000509980 ARHGEF6Q15052 776 aa13.57□□□□□ -0.24
EXOSC9-208ENST00000509980 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
EXOSC9-208ENST00000509980 ANKRD18AQ8IVF6 992 aa13.57□□□□□ -0.24
EXOSC9-208ENST00000509980 SHISA4Q96DD7 197 aa13.57□□□□□ -0.24
EXOSC9-208ENST00000509980 DBF4Q9UBU7 674 aaPredicted RBP13.57□□□□□ -0.24
EXOSC9-208ENST00000509980 USP2O75604 605 aaPredicted RBP13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 MYCP01106 439 aaPredicted RBP13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 TXNRD3Q86VQ6 643 aa13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 DPF3Q92784 378 aa13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 FBXW7Q969H0 707 aa13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 MS4A4AQ96JQ5 239 aa13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 CCDC85AQ96PX6 553 aaPredicted RBP13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 LAMA3Q16787 3333 aa13.56□□□□□ -0.24
EXOSC9-208ENST00000509980 CHL1O00533 1208 aa13.55□□□□□ -0.24
EXOSC9-208ENST00000509980 PCCAP05165 728 aaPredicted RBP13.55□□□□□ -0.24
EXOSC9-208ENST00000509980 HOXB7P09629 217 aa13.55□□□□□ -0.24
EXOSC9-208ENST00000509980 CCT4P50991 539 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms