RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TEX13AQ9BXU3 409 aaPredicted RBP21.11■□□□□ 0.97
CCHCR1-228ENST00000509552 LAMA4Q16363 1823 aa21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 TAF7LQ5H9L4 462 aa21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 RBM43Q6ZSC3 357 aaKnown RBP21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 ZNF274Q96GC6 653 aaPredicted RBP21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 CTNNA3Q9UI47 895 aa21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 NAP1L2Q9ULW6 460 aaPredicted RBP21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 UQCRHLA0A096LP55 91 aa21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 UQCRHP07919 91 aa21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 ZFYP08048 801 aaPredicted RBP21.1■□□□□ 0.97
CCHCR1-228ENST00000509552 M0R2C6 588 aa21.09■□□□□ 0.97
CCHCR1-228ENST00000509552 AP5Z1O43299 807 aa21.09■□□□□ 0.97
CCHCR1-228ENST00000509552 NR1I2O75469 434 aa21.09■□□□□ 0.97
CCHCR1-228ENST00000509552 CCT2P78371 535 aaKnown RBP21.09■□□□□ 0.97
CCHCR1-228ENST00000509552 NOLC1Q14978 699 aaKnown RBP eCLIP21.09■□□□□ 0.97
CCHCR1-228ENST00000509552 PCCAP05165 728 aaPredicted RBP21.09■□□□□ 0.97
CCHCR1-228ENST00000509552 ANO6Q4KMQ2 910 aa21.09■□□□□ 0.97
CCHCR1-228ENST00000509552 XAGE2Q96GT9 111 aa21.09■□□□□ 0.97
CCHCR1-228ENST00000509552 CTDNEP1O95476 244 aa21.08■□□□□ 0.97
CCHCR1-228ENST00000509552 HSPA2P54652 639 aa21.08■□□□□ 0.97
CCHCR1-228ENST00000509552 WASHC4Q2M389 1173 aa21.08■□□□□ 0.97
CCHCR1-228ENST00000509552 OSBP2Q969R2 916 aa21.08■□□□□ 0.97
CCHCR1-228ENST00000509552 IFIT5Q13325 482 aaKnown RBP21.07■□□□□ 0.96
CCHCR1-228ENST00000509552 ATL3Q6DD88 541 aa21.07■□□□□ 0.96
CCHCR1-228ENST00000509552 SLAIN2Q9P270 581 aa21.07■□□□□ 0.96
CCHCR1-228ENST00000509552 PDIA3P30101 505 aaKnown RBP21.07■□□□□ 0.96
CCHCR1-228ENST00000509552 LUZP1Q86V48 1076 aa21.07■□□□□ 0.96
CCHCR1-228ENST00000509552 ZNF396Q96N95 335 aaPredicted RBP21.07■□□□□ 0.96
CCHCR1-228ENST00000509552 PLA2G12BQ9BX93 195 aa21.07■□□□□ 0.96
CCHCR1-228ENST00000509552 A0A0G2JLW4 131 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 IMMTQ16891 758 aaKnown RBP21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 VSIG10Q8N0Z9 540 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 ZBTB38Q8NAP3 1195 aaPredicted RBP21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 FAM89AQ96GI7 184 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 CBX8Q9HC52 389 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 XIRP1Q702N8 1843 aaKnown RBP21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 STARD3NLO95772 234 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 ADORA1P30542 326 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 FOSBP53539 338 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 CEBPZQ03701 1054 aaKnown RBP21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 FBXL16Q8N461 479 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 RCOR1Q9UKL0 485 aa21.06■□□□□ 0.96
CCHCR1-228ENST00000509552 SHANK3Q9BYB0 1731 aa21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 CAVIN2O95810 425 aa21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 TTLL5Q6EMB2 1281 aa21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 CHST3Q7LGC8 479 aa21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 CCDC85AQ96PX6 553 aaPredicted RBP21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 NCOA5Q9HCD5 579 aaKnown RBP21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 SALL1Q9NSC2 1324 aa21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 CSF1RP07333 972 aa21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 ADD1P35611 737 aaKnown RBP21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 SPC24Q8NBT2 197 aa21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 ABCC12Q96J65 1359 aa21.05■□□□□ 0.96
CCHCR1-228ENST00000509552 DNAJC10Q8IXB1 793 aa21.04■□□□□ 0.96
CCHCR1-228ENST00000509552 DYNC1I1O14576 645 aa21.04■□□□□ 0.96
CCHCR1-228ENST00000509552 APPBP2Q92624 585 aa21.04■□□□□ 0.96
CCHCR1-228ENST00000509552 SPTLC3Q9NUV7 552 aa21.04■□□□□ 0.96
CCHCR1-228ENST00000509552 CTAGE5O15320 804 aa21.03■□□□□ 0.96
CCHCR1-228ENST00000509552 ZAP70P43403 619 aa21.03■□□□□ 0.96
CCHCR1-228ENST00000509552 ZNF165P49910 485 aa21.03■□□□□ 0.96
CCHCR1-228ENST00000509552 EVCP57679 992 aa21.03■□□□□ 0.96
CCHCR1-228ENST00000509552 CCAR1Q8IX12 1150 aaKnown RBP21.03■□□□□ 0.96
CCHCR1-228ENST00000509552 PDCL3Q9H2J4 239 aa21.03■□□□□ 0.96
CCHCR1-228ENST00000509552 ASAP1Q9ULH1 1129 aa21.03■□□□□ 0.96
CCHCR1-228ENST00000509552 CCDC73Q6ZRK6 1079 aa21.02■□□□□ 0.96
CCHCR1-228ENST00000509552 TDRD7Q8NHU6 1098 aaKnown RBP21.02■□□□□ 0.96
CCHCR1-228ENST00000509552 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.96
CCHCR1-228ENST00000509552 CARMIL3Q8ND23 1372 aa21.02■□□□□ 0.95
CCHCR1-228ENST00000509552 DHX16O60231 1041 aaKnown RBP21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 ATP2B3Q16720 1220 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 METTL24Q5JXM2 366 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 GIGYF2Q6Y7W6 1299 aaKnown RBP21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 PIGBQ92521 554 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 PRIMPOLQ96LW4 560 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.01■□□□□ 0.952e-6■■■■■ 27.1
CCHCR1-228ENST00000509552 FGAP02671 866 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 HAND2P61296 217 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 HSP90AB3PQ58FF7 597 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 USP28Q96RU2 1077 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 DNAJC25Q9H1X3 360 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 CDHR2Q9BYE9 1310 aa21.01■□□□□ 0.95
CCHCR1-228ENST00000509552 TOGARAM1Q9Y4F4 1720 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 SCARF1Q14162 830 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 GLIPR1L2Q4G1C9 344 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 LDHAL6AQ6ZMR3 332 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 KIAA1524Q8TCG1 905 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 KCNF1Q9H3M0 494 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 MYH15Q9Y2K3 1946 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 GUCY1B3Q02153 619 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 ZSCAN25Q6NSZ9 544 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 RALYLQ86SE5 291 aaKnown RBP21■□□□□ 0.95
CCHCR1-228ENST00000509552 DRC7Q8IY82 874 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 C17orf53Q8N3J3 647 aaPredicted RBP21■□□□□ 0.95
CCHCR1-228ENST00000509552 NCOA7Q8NI08 942 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 TRIM5Q9C035 493 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 ABCA3Q99758 1704 aa21■□□□□ 0.95
CCHCR1-228ENST00000509552 PRC1O43663 620 aa20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 RBM10P98175 930 aaKnown RBP20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms