RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 TCEANC2Q96MN5 208 aa12.57□□□□□ -0.4
CCSER1-209ENST00000509176 SH3TC1Q8TE82 1336 aa12.57□□□□□ -0.4
CCSER1-209ENST00000509176 SYCE3A1L190 88 aa12.57□□□□□ -0.4
CCSER1-209ENST00000509176 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
CCSER1-209ENST00000509176 HOXC9P31274 260 aa12.57□□□□□ -0.4
CCSER1-209ENST00000509176 PAFAH1B1P43034 410 aa12.57□□□□□ -0.4
CCSER1-209ENST00000509176 KIF4BQ2VIQ3 1234 aa12.57□□□□□ -0.4
CCSER1-209ENST00000509176 TRIM6Q9C030 488 aaPredicted RBP12.57□□□□□ -0.4
CCSER1-209ENST00000509176 SPC25Q9HBM1 224 aa12.57□□□□□ -0.4
CCSER1-209ENST00000509176 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
CCSER1-209ENST00000509176 CCDC172P0C7W6 258 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 RBM25P49756 843 aaKnown RBP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 IP6K1Q92551 441 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 URB2Q14146 1524 aaKnown RBP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 ASIC1P78348 528 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 PROCA1Q8NCQ7 364 aaPredicted RBP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 PAGR1Q9BTK6 254 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 MAP2K1Q02750 393 aaPredicted RBP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 EYA1Q99502 592 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 MAST3O60307 1309 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 PCF11O94913 1555 aaKnown RBP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 CUL7Q14999 1698 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 M0QZ92 97 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 RRAGBQ5VZM2 374 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 KRT79Q5XKE5 535 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 DCPSQ96C86 337 aaKnown RBP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 ZBTB24O43167 697 aaPredicted RBP12.56□□□□□ -0.4
CCSER1-209ENST00000509176 CCDC102BQ68D86 513 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 TAOK3Q9H2K8 898 aa12.56□□□□□ -0.4
CCSER1-209ENST00000509176 CHMP2AO43633 222 aa12.55□□□□□ -0.4
CCSER1-209ENST00000509176 ITGA6P23229 1130 aa12.55□□□□□ -0.4
CCSER1-209ENST00000509176 TFCP2Q12800 502 aa12.55□□□□□ -0.4
CCSER1-209ENST00000509176 ZNF772Q68DY9 489 aaPredicted RBP12.55□□□□□ -0.4
CCSER1-209ENST00000509176 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
CCSER1-209ENST00000509176 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
CCSER1-209ENST00000509176 ZBED4O75132 1171 aa12.55□□□□□ -0.4
CCSER1-209ENST00000509176 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
CCSER1-209ENST00000509176 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
CCSER1-209ENST00000509176 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
CCSER1-209ENST00000509176 TRPC5Q9UL62 973 aaPredicted RBP12.55□□□□□ -0.4
CCSER1-209ENST00000509176 NSMFQ6X4W1 530 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 ZKSCAN3Q9BRR0 538 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 TBX22Q9Y458 520 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 C2CD5Q86YS7 1000 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 FERP16591 822 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 NACA2Q9H009 215 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 RMND1Q9NWS8 449 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 GOLGA6L10A0A0M3HER8 536 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 TRIM37O94972 964 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 MYCP01106 439 aaPredicted RBP12.54□□□□□ -0.4
CCSER1-209ENST00000509176 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
CCSER1-209ENST00000509176 HLTFQ14527 1009 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCSER1-209ENST00000509176 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 C20orf194Q5TEA3 1177 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
CCSER1-209ENST00000509176 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
CCSER1-209ENST00000509176 GNA11P29992 359 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 FLAD1Q8NFF5 587 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 TNPO1Q92973 898 aaKnown RBP12.53□□□□□ -0.4
CCSER1-209ENST00000509176 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 IKBKGQ9Y6K9 419 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 RNF113AO15541 343 aaKnown RBP12.53□□□□□ -0.4
CCSER1-209ENST00000509176 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 MBD4O95243 580 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 A1BGP04217 495 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 HS2ST1Q7LGA3 356 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 C8orf58Q8NAV2 365 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 RNF34Q969K3 372 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 SLC5A4Q9NY91 659 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 CTAGE5O15320 804 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 TAF5LO75529 589 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 INCENPQ9NQS7 918 aa12.53□□□□□ -0.4
CCSER1-209ENST00000509176 CALML3P27482 149 aa12.52□□□□□ -0.4
CCSER1-209ENST00000509176 CASQ1P31415 396 aa12.52□□□□□ -0.4
CCSER1-209ENST00000509176 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.4
CCSER1-209ENST00000509176 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.4
CCSER1-209ENST00000509176 YTHDC2Q9H6S0 1430 aaKnown RBP12.52□□□□□ -0.4
CCSER1-209ENST00000509176 GCOM1H8Y6P7 765 aaPredicted RBP12.52□□□□□ -0.4
CCSER1-209ENST00000509176 N4BP3O15049 544 aa12.52□□□□□ -0.4
CCSER1-209ENST00000509176 MYZAPP0CAP1 466 aa12.52□□□□□ -0.4
CCSER1-209ENST00000509176 CCDC169A6NNP5 214 aa12.52□□□□□ -0.41
CCSER1-209ENST00000509176 DDX39AO00148 427 aaKnown RBP12.52□□□□□ -0.41
CCSER1-209ENST00000509176 PDE8AO60658 829 aa12.52□□□□□ -0.41
CCSER1-209ENST00000509176 BMP15O95972 392 aa12.52□□□□□ -0.41
CCSER1-209ENST00000509176 MCM7P33993 719 aa12.52□□□□□ -0.41
CCSER1-209ENST00000509176 Q6ZUG5 572 aa12.52□□□□□ -0.41
CCSER1-209ENST00000509176 AZI2Q9H6S1 392 aa12.52□□□□□ -0.41
CCSER1-209ENST00000509176 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
CCSER1-209ENST00000509176 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
CCSER1-209ENST00000509176 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
CCSER1-209ENST00000509176 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
CCSER1-209ENST00000509176 PLIN2Q99541 437 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms