RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ASTN2O75129 1339 aaPredicted RBP15.91■□□□□ 0.14
PDPN-208ENST00000509009 ZNF521Q96K83 1311 aa15.91■□□□□ 0.14
PDPN-208ENST00000509009 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
PDPN-208ENST00000509009 ADM5C9JUS6 153 aa15.9■□□□□ 0.14
PDPN-208ENST00000509009 COA1Q9GZY4 146 aa15.9■□□□□ 0.14
PDPN-208ENST00000509009 ZNF804BA4D1E1 1349 aa15.9■□□□□ 0.14
PDPN-208ENST00000509009 ZNF609O15014 1411 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 ANKRD18BA2A2Z9 1011 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 HUNKP57058 714 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 CHRNDQ07001 517 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 DACT2Q5SW24 774 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 SULF1Q8IWU6 871 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 MXD3Q9BW11 206 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 MYOZ2Q9NPC6 264 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 CACNA1FO60840 1977 aa15.89■□□□□ 0.13
PDPN-208ENST00000509009 POLR2AP24928 1970 aaKnown RBP15.89■□□□□ 0.13
PDPN-208ENST00000509009 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
PDPN-208ENST00000509009 STRIP1Q5VSL9 837 aa15.88■□□□□ 0.13
PDPN-208ENST00000509009 ANGEL2Q5VTE6 544 aaKnown RBP15.88■□□□□ 0.13
PDPN-208ENST00000509009 LMBR1LQ6UX01 489 aa15.88■□□□□ 0.13
PDPN-208ENST00000509009 C2orf69Q8N8R5 385 aa15.88■□□□□ 0.13
PDPN-208ENST00000509009 BEGAINQ9BUH8 593 aa15.88■□□□□ 0.13
PDPN-208ENST00000509009 GBA2Q9HCG7 927 aaPredicted RBP15.88■□□□□ 0.13
PDPN-208ENST00000509009 GGA3Q9NZ52 723 aa15.88■□□□□ 0.13
PDPN-208ENST00000509009 GRM8O00222 908 aa15.87■□□□□ 0.13
PDPN-208ENST00000509009 ALDH1L1O75891 902 aa15.87■□□□□ 0.13
PDPN-208ENST00000509009 KLRK1P26718 216 aa15.87■□□□□ 0.13
PDPN-208ENST00000509009 IFIT5Q13325 482 aaKnown RBP15.87■□□□□ 0.13
PDPN-208ENST00000509009 TTLL5Q6EMB2 1281 aa15.87■□□□□ 0.13
PDPN-208ENST00000509009 HELBQ8NG08 1087 aaPredicted RBP15.87■□□□□ 0.13
PDPN-208ENST00000509009 ZIC5Q96T25 663 aa15.87■□□□□ 0.13
PDPN-208ENST00000509009 SNAP23O00161 211 aa15.86■□□□□ 0.13
PDPN-208ENST00000509009 TAF5LO75529 589 aa15.86■□□□□ 0.13
PDPN-208ENST00000509009 SLC4A10Q6U841 1118 aa15.86■□□□□ 0.13
PDPN-208ENST00000509009 C9orf78Q9NZ63 289 aaPredicted RBP15.86■□□□□ 0.13
PDPN-208ENST00000509009 CHMP3Q9Y3E7 222 aa15.86■□□□□ 0.13
PDPN-208ENST00000509009 MYH3P11055 1940 aa15.86■□□□□ 0.13
PDPN-208ENST00000509009 KCNJ4P48050 445 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 BRPF1P55201 1214 aaPredicted RBP15.85■□□□□ 0.13
PDPN-208ENST00000509009 NOGQ13253 232 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 NBPF9Q3BBW0 867 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 RGMBQ6NW40 437 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 OGFOD1Q8N543 542 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 FBXW7Q969H0 707 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 CDCA5Q96FF9 252 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 SRCIN1Q9C0H9 1055 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 CD209Q9NNX6 404 aa15.85■□□□□ 0.13
PDPN-208ENST00000509009 FAM155AB1AL88 458 aaPredicted RBP15.84■□□□□ 0.13
PDPN-208ENST00000509009 MMP14P50281 582 aa15.84■□□□□ 0.13
PDPN-208ENST00000509009 GTF2IP78347 998 aa15.84■□□□□ 0.13
PDPN-208ENST00000509009 CCDC57Q2TAC2 916 aa15.84■□□□□ 0.13
PDPN-208ENST00000509009 LDHAL6AQ6ZMR3 332 aa15.84■□□□□ 0.13
PDPN-208ENST00000509009 C15orf52Q6ZUT6 534 aaKnown RBP15.84■□□□□ 0.13
PDPN-208ENST00000509009 MRPL50Q8N5N7 158 aaKnown RBP15.84■□□□□ 0.13
PDPN-208ENST00000509009 CCDC102AQ96A19 550 aa15.84■□□□□ 0.13
PDPN-208ENST00000509009 ZNF594Q96JF6 807 aaPredicted RBP15.84■□□□□ 0.13
PDPN-208ENST00000509009 MYO3BQ8WXR4 1341 aa15.84■□□□□ 0.13
PDPN-208ENST00000509009 PITPNM2Q9BZ72 1349 aa15.84■□□□□ 0.13
PDPN-208ENST00000509009 IRS2Q9Y4H2 1338 aa15.84■□□□□ 0.13
PDPN-208ENST00000509009 CA12O43570 354 aa15.83■□□□□ 0.12
PDPN-208ENST00000509009 KAZALD1Q96I82 304 aa15.83■□□□□ 0.12
PDPN-208ENST00000509009 TSKSQ9UJT2 592 aa15.83■□□□□ 0.12
PDPN-208ENST00000509009 SCAF8Q9UPN6 1271 aaKnown RBP15.83■□□□□ 0.12
PDPN-208ENST00000509009 E9PSI1 815 aa15.82■□□□□ 0.12
PDPN-208ENST00000509009 WNT10BO00744 389 aa15.82■□□□□ 0.12
PDPN-208ENST00000509009 NBPF7P0C2Y1 421 aaPredicted RBP15.82■□□□□ 0.12
PDPN-208ENST00000509009 ZNF157P51786 506 aaPredicted RBP15.82■□□□□ 0.12
PDPN-208ENST00000509009 SLFN5Q08AF3 891 aa15.82■□□□□ 0.12
PDPN-208ENST00000509009 UTYO14607 1347 aa15.81■□□□□ 0.12
PDPN-208ENST00000509009 PLIN1O60240 522 aa15.81■□□□□ 0.12
PDPN-208ENST00000509009 KIF23Q02241 960 aaPredicted RBP15.81■□□□□ 0.12
PDPN-208ENST00000509009 TAF7LQ5H9L4 462 aa15.81■□□□□ 0.12
PDPN-208ENST00000509009 PRAMEF18Q5VWM3 479 aa15.81■□□□□ 0.12
PDPN-208ENST00000509009 KIAA0825Q8IV33 1275 aa15.81■□□□□ 0.12
PDPN-208ENST00000509009 SUCLG2Q96I99 432 aa15.81■□□□□ 0.12
PDPN-208ENST00000509009 ZBED3Q96IU2 234 aaPredicted RBP15.81■□□□□ 0.12
PDPN-208ENST00000509009 THSD7BQ9C0I4 1608 aa15.81■□□□□ 0.12
PDPN-208ENST00000509009 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
PDPN-208ENST00000509009 PSME4Q14997 1843 aa15.8■□□□□ 0.12
PDPN-208ENST00000509009 SPEF2Q9C093 1822 aa15.8■□□□□ 0.12
PDPN-208ENST00000509009 IL1R1P14778 569 aa15.8■□□□□ 0.12
PDPN-208ENST00000509009 FKBP1BP68106 108 aa15.8■□□□□ 0.12
PDPN-208ENST00000509009 CERS5Q8N5B7 392 aa15.8■□□□□ 0.12
PDPN-208ENST00000509009 SSH1Q8WYL5 1049 aa15.8■□□□□ 0.12
PDPN-208ENST00000509009 SASH1O94885 1247 aa15.79■□□□□ 0.12
PDPN-208ENST00000509009 MOB2Q70IA6 237 aa15.79■□□□□ 0.12
PDPN-208ENST00000509009 ZNF804AQ7Z570 1209 aa15.79■□□□□ 0.12
PDPN-208ENST00000509009 CDCA7LQ96GN5 454 aa15.79■□□□□ 0.12
PDPN-208ENST00000509009 PUS3Q9BZE2 481 aaKnown RBP15.79■□□□□ 0.12
PDPN-208ENST00000509009 HDAC9Q9UKV0 1011 aa15.79■□□□□ 0.12
PDPN-208ENST00000509009 PTPRCP08575 1304 aa15.78■□□□□ 0.12
PDPN-208ENST00000509009 UBE2Q2LH0YL09 131 aa15.78■□□□□ 0.12
PDPN-208ENST00000509009 SLC10A3P09131 477 aa15.78■□□□□ 0.12
PDPN-208ENST00000509009 TRMT2AQ8IZ69 625 aaKnown RBP15.78■□□□□ 0.12
PDPN-208ENST00000509009 CSRNP1Q96S65 589 aa15.78■□□□□ 0.12
PDPN-208ENST00000509009 RIPOR2Q9Y4F9 1068 aa15.78■□□□□ 0.12
PDPN-208ENST00000509009 FKBP1AP62942 108 aaKnown RBP15.77■□□□□ 0.12
PDPN-208ENST00000509009 UBE4AQ14139 1066 aa15.77■□□□□ 0.12
PDPN-208ENST00000509009 RABL6Q3YEC7 729 aaPredicted RBP15.77■□□□□ 0.12
PDPN-208ENST00000509009 ABHD8Q96I13 439 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms