RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
SNCA-211ENST00000508895 MED23Q9ULK4 1368 aa10.94□□□□□ -0.66
SNCA-211ENST00000508895 HSP90B1P14625 803 aaKnown RBP10.94□□□□□ -0.66
SNCA-211ENST00000508895 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
SNCA-211ENST00000508895 IGHMBP2P38935 993 aaKnown RBP10.94□□□□□ -0.66
SNCA-211ENST00000508895 RFX5P48382 616 aaPredicted RBP10.94□□□□□ -0.66
SNCA-211ENST00000508895 IFIT5Q13325 482 aaKnown RBP10.94□□□□□ -0.66
SNCA-211ENST00000508895 TNIP1Q15025 636 aa10.94□□□□□ -0.66
SNCA-211ENST00000508895 RBM26Q5T8P6 1007 aaKnown RBP10.94□□□□□ -0.66
SNCA-211ENST00000508895 EYA3Q99504 573 aa10.94□□□□□ -0.66
SNCA-211ENST00000508895 ADARB2Q9NS39 739 aaKnown RBP10.94□□□□□ -0.66
SNCA-211ENST00000508895 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
SNCA-211ENST00000508895 PCDHAC2Q9Y5I4 1007 aa10.94□□□□□ -0.66
SNCA-211ENST00000508895 ZNF804BA4D1E1 1349 aa10.93□□□□□ -0.66
SNCA-211ENST00000508895 AOX1Q06278 1338 aa10.93□□□□□ -0.66
SNCA-211ENST00000508895 PLIN1O60240 522 aa10.93□□□□□ -0.66
SNCA-211ENST00000508895 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
SNCA-211ENST00000508895 USP50Q70EL3 339 aaPredicted RBP10.93□□□□□ -0.66
SNCA-211ENST00000508895 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
SNCA-211ENST00000508895 CERS5Q8N5B7 392 aa10.93□□□□□ -0.66
SNCA-211ENST00000508895 MEIS3Q99687 375 aa10.93□□□□□ -0.66
SNCA-211ENST00000508895 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
SNCA-211ENST00000508895 RIPOR2Q9Y4F9 1068 aa10.93□□□□□ -0.66
SNCA-211ENST00000508895 RSBN1LQ6PCB5 846 aaPredicted RBP10.92□□□□□ -0.66
SNCA-211ENST00000508895 DPF2Q92785 391 aa10.92□□□□□ -0.66
SNCA-211ENST00000508895 MPHOSPH8Q99549 860 aa10.92□□□□□ -0.66
SNCA-211ENST00000508895 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
SNCA-211ENST00000508895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.92□□□□□ -0.66
SNCA-211ENST00000508895 ADM5C9JUS6 153 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 TRIM27P14373 513 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 LDHAL6AQ6ZMR3 332 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 USP48Q86UV5 1035 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 VGLL2Q8N8G2 317 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 LEMD3Q9Y2U8 911 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 ARAP2Q8WZ64 1704 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 TNRC18O15417 2968 aaPredicted RBP10.91□□□□□ -0.66
SNCA-211ENST00000508895 ZNF609O15014 1411 aa10.91□□□□□ -0.66
SNCA-211ENST00000508895 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 RLBP1P12271 317 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 GYG1P46976 350 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 ZNF280AP59817 542 aaPredicted RBP10.9□□□□□ -0.66
SNCA-211ENST00000508895 GRIK5Q16478 980 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 CCDC57Q2TAC2 916 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 C15orf52Q6ZUT6 534 aaKnown RBP10.9□□□□□ -0.66
SNCA-211ENST00000508895 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 ARHGAP45Q92619 1136 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 ANKRD2Q9GZV1 360 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 CD209Q9NNX6 404 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
SNCA-211ENST00000508895 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
SNCA-211ENST00000508895 LRRFIP2Q9Y608 721 aaKnown RBP10.9□□□□□ -0.66
SNCA-211ENST00000508895 CNTNAP1P78357 1384 aa10.9□□□□□ -0.67
SNCA-211ENST00000508895 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 H7C1D1 291 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 VEGFBP49765 207 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 GTF2IP78347 998 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 PTPN12Q05209 780 aaKnown RBP10.89□□□□□ -0.67
SNCA-211ENST00000508895 KIF4BQ2VIQ3 1234 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 ATF7IPQ6VMQ6 1270 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 ATG9AQ7Z3C6 839 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 PODNQ7Z5L7 613 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
SNCA-211ENST00000508895 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 CLUAP1Q96AJ1 413 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 FAM84BQ96KN1 310 aaPredicted RBP10.89□□□□□ -0.67
SNCA-211ENST00000508895 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
SNCA-211ENST00000508895 COA1Q9GZY4 146 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 CNNM1Q9NRU3 951 aa10.89□□□□□ -0.67
SNCA-211ENST00000508895 G3V3G9 751 aa10.88□□□□□ -0.67
SNCA-211ENST00000508895 RPS12P25398 132 aaKnown RBP10.88□□□□□ -0.67
SNCA-211ENST00000508895 SCARF1Q14162 830 aa10.88□□□□□ -0.67
SNCA-211ENST00000508895 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
SNCA-211ENST00000508895 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
SNCA-211ENST00000508895 PRAMEF18Q5VWM3 479 aa10.88□□□□□ -0.67
SNCA-211ENST00000508895 ZKSCAN2Q63HK3 967 aa10.88□□□□□ -0.67
SNCA-211ENST00000508895 INTS3Q68E01 1043 aaKnown RBP10.88□□□□□ -0.67
SNCA-211ENST00000508895 GGA3Q9NZ52 723 aa10.88□□□□□ -0.67
SNCA-211ENST00000508895 IQSEC3Q9UPP2 1182 aaPredicted RBP10.88□□□□□ -0.67
SNCA-211ENST00000508895 SASH1O94885 1247 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 CELF2O95319 508 aaKnown RBP10.87□□□□□ -0.67
SNCA-211ENST00000508895 IL1R1P14778 569 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 FGFR2P21802 821 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 KCNJ4P48050 445 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 TAF7LQ5H9L4 462 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 STRIP1Q5VSL9 837 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 KIAA0825Q8IV33 1275 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 TMEM57Q8N5G2 664 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 AGBL3Q8NEM8 1001 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 ZBED3Q96IU2 234 aaPredicted RBP10.87□□□□□ -0.67
SNCA-211ENST00000508895 ZIC5Q96T25 663 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 ZNF408Q9H9D4 720 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 MYOZ2Q9NPC6 264 aa10.87□□□□□ -0.67
SNCA-211ENST00000508895 COL1A1P02452 1464 aaPredicted RBP10.87□□□□□ -0.67
SNCA-211ENST00000508895 RASSF10A6NK89 507 aa10.86□□□□□ -0.67
SNCA-211ENST00000508895 IPO8O15397 1037 aaKnown RBP10.86□□□□□ -0.67
SNCA-211ENST00000508895 USP17L8P0C7I0 530 aa10.86□□□□□ -0.67
SNCA-211ENST00000508895 UBTFL1P0CB47 393 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms