RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PITPNM2Q9BZ72 1349 aa17.26■□□□□ 0.35
CCHCR1-227ENST00000508852 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
CCHCR1-227ENST00000508852 KCNJ4P48050 445 aa17.26■□□□□ 0.35
CCHCR1-227ENST00000508852 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-227ENST00000508852 CASP7P55210 303 aa17.26■□□□□ 0.35
CCHCR1-227ENST00000508852 GRM1Q13255 1194 aa17.26■□□□□ 0.35
CCHCR1-227ENST00000508852 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-227ENST00000508852 STRIP1Q5VSL9 837 aa17.26■□□□□ 0.35
CCHCR1-227ENST00000508852 ZNF804BA4D1E1 1349 aa17.25■□□□□ 0.35
CCHCR1-227ENST00000508852 LBX1P52954 281 aa17.25■□□□□ 0.35
CCHCR1-227ENST00000508852 HUNKP57058 714 aa17.25■□□□□ 0.35
CCHCR1-227ENST00000508852 CCDC102AQ96A19 550 aa17.25■□□□□ 0.35
CCHCR1-227ENST00000508852 GMLQ99445 158 aa17.25■□□□□ 0.35
CCHCR1-227ENST00000508852 GBA2Q9HCG7 927 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-227ENST00000508852 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
CCHCR1-227ENST00000508852 ALDH1L1O75891 902 aa17.24■□□□□ 0.35
CCHCR1-227ENST00000508852 HSPA8P11142 646 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-227ENST00000508852 FKBP1BP68106 108 aa17.24■□□□□ 0.35
CCHCR1-227ENST00000508852 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
CCHCR1-227ENST00000508852 BEND3Q5T5X7 828 aa17.24■□□□□ 0.35
CCHCR1-227ENST00000508852 GGA3Q9NZ52 723 aa17.24■□□□□ 0.35
CCHCR1-227ENST00000508852 SCARF1Q14162 830 aa17.23■□□□□ 0.35
CCHCR1-227ENST00000508852 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-227ENST00000508852 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
CCHCR1-227ENST00000508852 HDAC9Q9UKV0 1011 aa17.23■□□□□ 0.35
CCHCR1-227ENST00000508852 GRM8O00222 908 aa17.22■□□□□ 0.35
CCHCR1-227ENST00000508852 EGFRP00533 1210 aa17.22■□□□□ 0.35
CCHCR1-227ENST00000508852 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
CCHCR1-227ENST00000508852 RGMBQ6NW40 437 aa17.22■□□□□ 0.35
CCHCR1-227ENST00000508852 CHRNDQ07001 517 aa17.21■□□□□ 0.35
CCHCR1-227ENST00000508852 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.35
CCHCR1-227ENST00000508852 DACT2Q5SW24 774 aa17.21■□□□□ 0.35
CCHCR1-227ENST00000508852 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
CCHCR1-227ENST00000508852 TTLL5Q6EMB2 1281 aa17.21■□□□□ 0.35
CCHCR1-227ENST00000508852 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
CCHCR1-227ENST00000508852 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
CCHCR1-227ENST00000508852 CHMP3Q9Y3E7 222 aa17.21■□□□□ 0.35
CCHCR1-227ENST00000508852 ADM5C9JUS6 153 aa17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 E9PSI1 815 aa17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 F6X3S4 739 aa17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 AOC2O75106 756 aa17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 CAPN15O75808 1086 aa17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 FOXO4P98177 505 aa17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 FBXW7Q969H0 707 aa17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 ZNF521Q96K83 1311 aa17.2■□□□□ 0.34
CCHCR1-227ENST00000508852 NF2P35240 595 aa17.19■□□□□ 0.34
CCHCR1-227ENST00000508852 ZNF157P51786 506 aaPredicted RBP17.19■□□□□ 0.34
CCHCR1-227ENST00000508852 ZNF804AQ7Z570 1209 aa17.19■□□□□ 0.34
CCHCR1-227ENST00000508852 CDCA5Q96FF9 252 aa17.19■□□□□ 0.34
CCHCR1-227ENST00000508852 PTPRCP08575 1304 aa17.19■□□□□ 0.34
CCHCR1-227ENST00000508852 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
CCHCR1-227ENST00000508852 LMBR1LQ6UX01 489 aa17.18■□□□□ 0.34
CCHCR1-227ENST00000508852 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
CCHCR1-227ENST00000508852 SAGE1Q9NXZ1 904 aa17.18■□□□□ 0.34
CCHCR1-227ENST00000508852 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
CCHCR1-227ENST00000508852 ZNF646O15015 1829 aaPredicted RBP17.17■□□□□ 0.34
CCHCR1-227ENST00000508852 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
CCHCR1-227ENST00000508852 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
CCHCR1-227ENST00000508852 CD209Q9NNX6 404 aa17.17■□□□□ 0.34
CCHCR1-227ENST00000508852 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
CCHCR1-227ENST00000508852 AKAP11Q9UKA4 1901 aa17.16■□□□□ 0.34
CCHCR1-227ENST00000508852 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
CCHCR1-227ENST00000508852 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
CCHCR1-227ENST00000508852 WNT10BO00744 389 aa17.15■□□□□ 0.34
CCHCR1-227ENST00000508852 IL1R1P14778 569 aa17.15■□□□□ 0.34
CCHCR1-227ENST00000508852 GTF2IP78347 998 aa17.15■□□□□ 0.34
CCHCR1-227ENST00000508852 UTYO14607 1347 aa17.15■□□□□ 0.34
CCHCR1-227ENST00000508852 COL1A1P02452 1464 aaPredicted RBP17.14■□□□□ 0.33
CCHCR1-227ENST00000508852 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
CCHCR1-227ENST00000508852 FAM155AB1AL88 458 aaPredicted RBP17.14■□□□□ 0.33
CCHCR1-227ENST00000508852 MYO1BO43795 1136 aa17.14■□□□□ 0.33
CCHCR1-227ENST00000508852 SLC10A3P09131 477 aa17.14■□□□□ 0.33
CCHCR1-227ENST00000508852 UBE4AQ14139 1066 aa17.14■□□□□ 0.33
CCHCR1-227ENST00000508852 NBPF9Q3BBW0 867 aa17.14■□□□□ 0.33
CCHCR1-227ENST00000508852 MTMR14Q8NCE2 650 aa17.14■□□□□ 0.33
CCHCR1-227ENST00000508852 TAF5LO75529 589 aa17.13■□□□□ 0.33
CCHCR1-227ENST00000508852 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
CCHCR1-227ENST00000508852 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
CCHCR1-227ENST00000508852 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
CCHCR1-227ENST00000508852 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
CCHCR1-227ENST00000508852 ASTN2O75129 1339 aaPredicted RBP17.13■□□□□ 0.33
CCHCR1-227ENST00000508852 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
CCHCR1-227ENST00000508852 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
CCHCR1-227ENST00000508852 KIF23Q02241 960 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-227ENST00000508852 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
CCHCR1-227ENST00000508852 ARMC9Q7Z3E5 817 aa17.12■□□□□ 0.33
CCHCR1-227ENST00000508852 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
CCHCR1-227ENST00000508852 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
CCHCR1-227ENST00000508852 IRS2Q9Y4H2 1338 aa17.12■□□□□ 0.33
CCHCR1-227ENST00000508852 SASH1O94885 1247 aa17.11■□□□□ 0.33
CCHCR1-227ENST00000508852 KLRK1P26718 216 aa17.11■□□□□ 0.33
CCHCR1-227ENST00000508852 SLFN5Q08AF3 891 aa17.11■□□□□ 0.33
CCHCR1-227ENST00000508852 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
CCHCR1-227ENST00000508852 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
CCHCR1-227ENST00000508852 ABHD8Q96I13 439 aa17.11■□□□□ 0.33
CCHCR1-227ENST00000508852 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
CCHCR1-227ENST00000508852 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
CCHCR1-227ENST00000508852 UNCXA6NJT0 531 aa17.1■□□□□ 0.33
CCHCR1-227ENST00000508852 PLIN1O60240 522 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms