RNA–Protein interactions for RNA: ENST00000508350.1

CDH18-208, Transcript of cadherin 18, human

TSL 4

Gene CDH18, Length 578 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH18-208	ENST00000508350	WTIP	A6NIX2	430 aa	Predicted RBP	5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	NFKBIE	O00221	500 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	CCT4	P50991	539 aa	Known RBP	5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	INTS3	Q68E01	1043 aa	Known RBP	5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	LMBR1L	Q6UX01	489 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	DDX46	Q7L014	1031 aa	Known RBP	5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	ANKRD44	Q8N8A2	993 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	ARHGAP45	Q92619	1136 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	CNKSR1	Q969H4	720 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	ZNF594	Q96JF6	807 aa	Predicted RBP	5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	GPR101	Q96P66	508 aa	Predicted RBP	5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	CRAMP1	Q96RY5	1269 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	C1orf115	Q9H7X2	142 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	CHMP3	Q9Y3E7	222 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	PCDHGA4	Q9Y5G9	962 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	RIC1	Q4ADV7	1423 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	UTY	O14607	1347 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	RNF123	Q5XPI4	1314 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	MYH3	P11055	1940 aa		5.7	□□□□□ -1.5
CDH18-208	ENST00000508350	SPEF2	Q9C093	1822 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	ARFGEF1	Q9Y6D6	1849 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	PPEF1	O14829	653 aa	Predicted RBP	5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	CSF1R	P07333	972 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	ITGA6	P23229	1130 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	RPS8	P62241	208 aa	Known RBP	5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	GRAP	Q13588	217 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	CCDC152	Q4G0S7	254 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	ITPRIP	Q8IWB1	547 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	FTSJ3	Q8IY81	847 aa	Known RBP	5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	DZIP1L	Q8IYY4	767 aa	Known RBP	5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	KLHDC4	Q8TBB5	520 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	GRAPL	Q8TC17	118 aa	Predicted RBP	5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	PLA2G12B	Q9BX93	195 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	PUS3	Q9BZE2	481 aa	Known RBP	5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	COG6	Q9Y2V7	657 aa		5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	LRRFIP2	Q9Y608	721 aa	Known RBP	5.69	□□□□□ -1.5
CDH18-208	ENST00000508350	CCDC88A	Q3V6T2	1871 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	SNAP23	O00161	211 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	GRIN3B	O60391	1043 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	BBOX1	O75936	387 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	UBTFL1	P0CB47	393 aa	Predicted RBP	5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	ALDH1B1	P30837	517 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	GPSM2	P81274	684 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	C9orf131	Q5VYM1	1079 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	HELB	Q8NG08	1087 aa	Predicted RBP	5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	DAXX	Q9UER7	740 aa	Predicted RBP	5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	PDZRN3	Q9UPQ7	1066 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	ATP6V0A2	Q9Y487	856 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	SBF1	O95248	1867 aa		5.68	□□□□□ -1.5
CDH18-208	ENST00000508350	SNED1	Q8TER0	1413 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	FER1L6	Q2WGJ9	1857 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	ZBTB7B	O15156	539 aa	Predicted RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	NUDT7	P0C024	238 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	RRP1	P56182	461 aa	Known RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	IRX6	P78412	446 aa	Predicted RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	LSM11	P83369	360 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	FOXK1	P85037	733 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	IFIT5	Q13325	482 aa	Known RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	RABL6	Q3YEC7	729 aa	Predicted RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	CCDC93	Q567U6	631 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	ANKRD18A	Q8IVF6	992 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	SP8	Q8IXZ3	490 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	ZC3H15	Q8WU90	426 aa	Known RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	PTCD2	Q8WV60	388 aa	Known RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	GPHN	Q9NQX3	736 aa	Predicted RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	RNF181	Q9P0P0	153 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	POLL	Q9UGP5	575 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	MINPP1	Q9UNW1	487 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	PA2G4	Q9UQ80	394 aa	Known RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	RTL9	Q8NET4	1388 aa		5.67	□□□□□ -1.5
CDH18-208	ENST00000508350	COL4A5	P29400	1685 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	CHD4	Q14839	1912 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	PNMA6E	A0A0J9YXQ4	647 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	ANKRD18B	A2A2Z9	1011 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	TAF5L	O75529	589 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	GNAI2	P04899	355 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	HSP90B1	P14625	803 aa	Known RBP	5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	KLRK1	P26718	216 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	PDE4A	P27815	886 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	IGHMBP2	P38935	993 aa	Known RBP	5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	RFX5	P48382	616 aa	Predicted RBP	5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	MVP	Q14764	893 aa	Known RBP	5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	AOC3	Q16853	763 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	CCDC57	Q2TAC2	916 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	LRRC24	Q50LG9	513 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	TAF7L	Q5H9L4	462 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	DPP8	Q6V1X1	898 aa	Predicted RBP	5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	MPND	Q8N594	471 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	ZNF526	Q8TF50	670 aa	Predicted RBP	5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	CRBN	Q96SW2	442 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	CDC5L	Q99459	802 aa	Known RBP	5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	SIL1	Q9H173	461 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	TAOK3	Q9H2K8	898 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	ANKIB1	Q9P2G1	1089 aa		5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	NSFL1C	Q9UNZ2	370 aa	Known RBP	5.66	□□□□□ -1.5
CDH18-208	ENST00000508350	DUOX1	Q9NRD9	1551 aa		5.65	□□□□□ -1.5
CDH18-208	ENST00000508350	C6orf229	H3BNL8	230 aa		5.65	□□□□□ -1.5
CDH18-208	ENST00000508350	SRGAP3	O43295	1099 aa		5.65	□□□□□ -1.5

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