RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 LRRCC1Q9C099 1032 aa12.63□□□□□ -0.39
HTT-204ENST00000508321 ZC3H12CQ9C0D7 883 aaKnown RBP12.63□□□□□ -0.39
HTT-204ENST00000508321 IRS2Q9Y4H2 1338 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 ZNF646O15015 1829 aaPredicted RBP12.62□□□□□ -0.39
HTT-204ENST00000508321 TAF5LO75529 589 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 RASSF7Q02833 373 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 TFCP2Q12800 502 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 CAVIN4Q5BKX8 364 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 SMC5Q8IY18 1101 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 NIM1KQ8IY84 436 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 CLASRPQ8N2M8 674 aaKnown RBP12.62□□□□□ -0.39
HTT-204ENST00000508321 LARGE2Q8N3Y3 721 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
HTT-204ENST00000508321 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
HTT-204ENST00000508321 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
HTT-204ENST00000508321 COL4A5P29400 1685 aa12.61□□□□□ -0.39
HTT-204ENST00000508321 A0A1B0GUL7 405 aa12.61□□□□□ -0.39
HTT-204ENST00000508321 SLC51AQ86UW1 340 aa12.61□□□□□ -0.39
HTT-204ENST00000508321 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
HTT-204ENST00000508321 SCN9AQ15858 1988 aa12.6□□□□□ -0.39
HTT-204ENST00000508321 AOC3Q16853 763 aa12.6□□□□□ -0.39
HTT-204ENST00000508321 PODNQ7Z5L7 613 aa12.6□□□□□ -0.39
HTT-204ENST00000508321 VPS37DQ86XT2 251 aa12.6□□□□□ -0.39
HTT-204ENST00000508321 GNL3LQ9NVN8 582 aaKnown RBP12.6□□□□□ -0.39
HTT-204ENST00000508321 RNF181Q9P0P0 153 aa12.6□□□□□ -0.39
HTT-204ENST00000508321 PDS5AQ29RF7 1337 aaKnown RBP12.6□□□□□ -0.39
HTT-204ENST00000508321 G3V3G9 751 aa12.59□□□□□ -0.39
HTT-204ENST00000508321 SEMA3EO15041 775 aa12.59□□□□□ -0.39
HTT-204ENST00000508321 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
HTT-204ENST00000508321 CENPQQ7L2Z9 268 aaPredicted RBP12.59□□□□□ -0.39
HTT-204ENST00000508321 MAST2Q6P0Q8 1798 aa12.58□□□□□ -0.39
HTT-204ENST00000508321 ECE2O60344 883 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.4
HTT-204ENST00000508321 IL1R1P14778 569 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 HIBADHP31937 336 aaKnown RBP12.58□□□□□ -0.4
HTT-204ENST00000508321 C9orf131Q5VYM1 1079 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 AACSQ86V21 672 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 GPATCH3Q96I76 525 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 ZNF512BQ96KM6 892 aaPredicted RBP12.58□□□□□ -0.4
HTT-204ENST00000508321 PPP4R2Q9NY27 417 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 ZNRF3Q9ULT6 936 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 KDM2BQ8NHM5 1336 aa12.58□□□□□ -0.4
HTT-204ENST00000508321 AKAP11Q9UKA4 1901 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 FZD9O00144 591 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 APBB1O00213 710 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 KLRK1P26718 216 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 PRELPP51888 382 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
HTT-204ENST00000508321 CCDC158Q5M9N0 1113 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 FBXO33Q7Z6M2 555 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 FAM84BQ96KN1 310 aaPredicted RBP12.57□□□□□ -0.4
HTT-204ENST00000508321 NEUROD6Q96NK8 337 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 CD209Q9NNX6 404 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 IL1RAPL2Q9NP60 686 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 MYO3BQ8WXR4 1341 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 WDR90Q96KV7 1748 aa12.57□□□□□ -0.4
HTT-204ENST00000508321 SCN4AP35499 1836 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 DOCK2Q92608 1830 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 IGSF3O75054 1194 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 IGHDP01880 384 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
HTT-204ENST00000508321 GYG1P46976 350 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 FKBP1AP62942 108 aaKnown RBP12.56□□□□□ -0.4
HTT-204ENST00000508321 NUCB1Q02818 461 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 TNIP1Q15025 636 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
HTT-204ENST00000508321 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.56□□□□□ -0.4
HTT-204ENST00000508321 EAF2Q96CJ1 260 aaPredicted RBP12.56□□□□□ -0.4
HTT-204ENST00000508321 GPR101Q96P66 508 aaPredicted RBP12.56□□□□□ -0.4
HTT-204ENST00000508321 DBNDD1Q9H9R9 158 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 DBNLQ9UJU6 430 aaKnown RBP12.56□□□□□ -0.4
HTT-204ENST00000508321 TTC41PQ6P2S7 1318 aa12.56□□□□□ -0.4
HTT-204ENST00000508321 SNAP23O00161 211 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 MMP14P50281 582 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 TIMM10P62072 90 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 CCDC102BQ68D86 513 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 CHD1LQ86WJ1 897 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 TBC1D22AQ8WUA7 517 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 DBNDD2Q9BQY9 259 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 DENND2AQ9ULE3 1009 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.55□□□□□ -0.4
HTT-204ENST00000508321 AOX1Q06278 1338 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 FAM205AQ6ZU69 1335 aa12.55□□□□□ -0.4
HTT-204ENST00000508321 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
HTT-204ENST00000508321 WTIPA6NIX2 430 aaPredicted RBP12.54□□□□□ -0.4
HTT-204ENST00000508321 FRAT2O75474 233 aaPredicted RBP12.54□□□□□ -0.4
HTT-204ENST00000508321 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
HTT-204ENST00000508321 ADORA1P30542 326 aa12.54□□□□□ -0.4
HTT-204ENST00000508321 PHKA1P46020 1223 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms