RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 RBM26Q5T8P6 1007 aaKnown RBP16.58■□□□□ 0.24
HMGCS1-205ENST00000508319 PODNQ7Z5L7 613 aa16.58■□□□□ 0.24
HMGCS1-205ENST00000508319 GGA3Q9NZ52 723 aa16.58■□□□□ 0.24
HMGCS1-205ENST00000508319 ASTN2O75129 1339 aaPredicted RBP16.57■□□□□ 0.24
HMGCS1-205ENST00000508319 AOC2O75106 756 aa16.57■□□□□ 0.24
HMGCS1-205ENST00000508319 CAPN15O75808 1086 aa16.57■□□□□ 0.24
HMGCS1-205ENST00000508319 USP17L3A6NCW0 530 aa16.56■□□□□ 0.24
HMGCS1-205ENST00000508319 USP17L4A6NCW7 530 aa16.56■□□□□ 0.24
HMGCS1-205ENST00000508319 KLRK1P26718 216 aa16.56■□□□□ 0.24
HMGCS1-205ENST00000508319 USP17L1Q7RTZ2 530 aa16.56■□□□□ 0.24
HMGCS1-205ENST00000508319 TXNRD3Q86VQ6 643 aa16.56■□□□□ 0.24
HMGCS1-205ENST00000508319 DCPSQ96C86 337 aaKnown RBP16.56■□□□□ 0.24
HMGCS1-205ENST00000508319 LEMD3Q9Y2U8 911 aa16.56■□□□□ 0.24
HMGCS1-205ENST00000508319 USP17L8P0C7I0 530 aa16.55■□□□□ 0.24
HMGCS1-205ENST00000508319 MAP2K2P36507 400 aa16.55■□□□□ 0.24
HMGCS1-205ENST00000508319 FOXO4P98177 505 aa16.55■□□□□ 0.24
HMGCS1-205ENST00000508319 DACT2Q5SW24 774 aa16.55■□□□□ 0.24
HMGCS1-205ENST00000508319 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
HMGCS1-205ENST00000508319 ZNF804BA4D1E1 1349 aa16.54■□□□□ 0.24
HMGCS1-205ENST00000508319 HUNKP57058 714 aa16.54■□□□□ 0.24
HMGCS1-205ENST00000508319 ANKRD2Q9GZV1 360 aa16.54■□□□□ 0.24
HMGCS1-205ENST00000508319 COA1Q9GZY4 146 aa16.54■□□□□ 0.24
HMGCS1-205ENST00000508319 MYOZ2Q9NPC6 264 aa16.54■□□□□ 0.24
HMGCS1-205ENST00000508319 ANKRD18BA2A2Z9 1011 aa16.53■□□□□ 0.24
HMGCS1-205ENST00000508319 CHRNDQ07001 517 aa16.53■□□□□ 0.24
HMGCS1-205ENST00000508319 SCARF1Q14162 830 aa16.53■□□□□ 0.24
HMGCS1-205ENST00000508319 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
HMGCS1-205ENST00000508319 SULF1Q8IWU6 871 aa16.53■□□□□ 0.24
HMGCS1-205ENST00000508319 BEGAINQ9BUH8 593 aa16.53■□□□□ 0.24
HMGCS1-205ENST00000508319 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
HMGCS1-205ENST00000508319 GBA2Q9HCG7 927 aaPredicted RBP16.53■□□□□ 0.24
HMGCS1-205ENST00000508319 MYO3BQ8WXR4 1341 aa16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 PITPNM2Q9BZ72 1349 aa16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 IRS2Q9Y4H2 1338 aa16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 PAPPA2Q9BXP8 1791 aa16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 GRM8O00222 908 aa16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 EPHA10Q5JZY3 1008 aa16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 STRIP1Q5VSL9 837 aa16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 CDCA5Q96FF9 252 aa16.52■□□□□ 0.24
HMGCS1-205ENST00000508319 IFIT5Q13325 482 aaKnown RBP16.51■□□□□ 0.23
HMGCS1-205ENST00000508319 ZIC5Q96T25 663 aa16.51■□□□□ 0.23
HMGCS1-205ENST00000508319 FAM155AB1AL88 458 aaPredicted RBP16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 SNAP23O00161 211 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 NOGQ13253 232 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 LMBR1LQ6UX01 489 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 C2orf69Q8N8R5 385 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 SRCIN1Q9C0H9 1055 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 TSKSQ9UJT2 592 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 CHMP3Q9Y3E7 222 aa16.5■□□□□ 0.23
HMGCS1-205ENST00000508319 TAF5LO75529 589 aa16.49■□□□□ 0.23
HMGCS1-205ENST00000508319 KCNJ4P48050 445 aa16.49■□□□□ 0.23
HMGCS1-205ENST00000508319 NBPF9Q3BBW0 867 aa16.49■□□□□ 0.23
HMGCS1-205ENST00000508319 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
HMGCS1-205ENST00000508319 C15orf52Q6ZUT6 534 aaKnown RBP16.49■□□□□ 0.23
HMGCS1-205ENST00000508319 WNT10BO00744 389 aa16.48■□□□□ 0.23
HMGCS1-205ENST00000508319 CA12O43570 354 aa16.48■□□□□ 0.23
HMGCS1-205ENST00000508319 TTLL5Q6EMB2 1281 aa16.48■□□□□ 0.23
HMGCS1-205ENST00000508319 OGFOD1Q8N543 542 aa16.48■□□□□ 0.23
HMGCS1-205ENST00000508319 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
HMGCS1-205ENST00000508319 KAZALD1Q96I82 304 aa16.48■□□□□ 0.23
HMGCS1-205ENST00000508319 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
HMGCS1-205ENST00000508319 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
HMGCS1-205ENST00000508319 GTF2IP78347 998 aa16.47■□□□□ 0.23
HMGCS1-205ENST00000508319 CCDC57Q2TAC2 916 aa16.47■□□□□ 0.23
HMGCS1-205ENST00000508319 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
HMGCS1-205ENST00000508319 SUCLG2Q96I99 432 aa16.47■□□□□ 0.23
HMGCS1-205ENST00000508319 ZNF594Q96JF6 807 aaPredicted RBP16.47■□□□□ 0.23
HMGCS1-205ENST00000508319 CD209Q9NNX6 404 aa16.47■□□□□ 0.23
HMGCS1-205ENST00000508319 CASP8AP2Q9UKL3 1982 aa16.47■□□□□ 0.23
HMGCS1-205ENST00000508319 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
HMGCS1-205ENST00000508319 UTYO14607 1347 aa16.46■□□□□ 0.23
HMGCS1-205ENST00000508319 E9PSI1 815 aa16.46■□□□□ 0.23
HMGCS1-205ENST00000508319 SASH1O94885 1247 aa16.46■□□□□ 0.23
HMGCS1-205ENST00000508319 SLC10A3P09131 477 aa16.46■□□□□ 0.23
HMGCS1-205ENST00000508319 ZNF157P51786 506 aaPredicted RBP16.46■□□□□ 0.23
HMGCS1-205ENST00000508319 KIAA0825Q8IV33 1275 aa16.46■□□□□ 0.23
HMGCS1-205ENST00000508319 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 NBPF7P0C2Y1 421 aaPredicted RBP16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 MMP14P50281 582 aa16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 FKBP1BP68106 108 aa16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 CERS5Q8N5B7 392 aa16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 CCDC102AQ96A19 550 aa16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 ZBED3Q96IU2 234 aaPredicted RBP16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 AKAP11Q9UKA4 1901 aa16.45■□□□□ 0.22
HMGCS1-205ENST00000508319 IL1R1P14778 569 aa16.44■□□□□ 0.22
HMGCS1-205ENST00000508319 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
HMGCS1-205ENST00000508319 LDHAL6AQ6ZMR3 332 aa16.44■□□□□ 0.22
HMGCS1-205ENST00000508319 ZNF804AQ7Z570 1209 aa16.44■□□□□ 0.22
HMGCS1-205ENST00000508319 RASAL3Q86YV0 1011 aa16.44■□□□□ 0.22
HMGCS1-205ENST00000508319 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
HMGCS1-205ENST00000508319 CNNM1Q9NRU3 951 aa16.44■□□□□ 0.22
HMGCS1-205ENST00000508319 PTPRCP08575 1304 aa16.44■□□□□ 0.22
HMGCS1-205ENST00000508319 KCNA4P22459 653 aa16.43■□□□□ 0.22
HMGCS1-205ENST00000508319 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
HMGCS1-205ENST00000508319 PRAMEF18Q5VWM3 479 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms