RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 NIF3L1Q9GZT8 377 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 RNF19AQ9NV58 838 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 PARP2Q9UGN5 583 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 WWC3Q9ULE0 1092 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 UBAP1LF5GYI3 381 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 SCAMP3O14828 347 aaKnown RBP2.96□□□□□ -1.94
SMN2-208ENST00000508258 MAPK8P45983 427 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 ZC3H6P61129 1189 aaKnown RBP2.96□□□□□ -1.94
SMN2-208ENST00000508258 GPLD1P80108 840 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 HDLBPQ00341 1268 aaKnown RBP2.96□□□□□ -1.94
SMN2-208ENST00000508258 NRG1Q02297 640 aaPredicted RBP2.96□□□□□ -1.94
SMN2-208ENST00000508258 PLAURQ03405 335 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 MSL1Q68DK7 614 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 METTL16Q86W50 562 aaKnown RBP2.96□□□□□ -1.94
SMN2-208ENST00000508258 FMR1NBQ8N0W7 255 aaPredicted RBP2.96□□□□□ -1.94
SMN2-208ENST00000508258 TTC16Q8NEE8 873 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 TRPM4Q8TD43 1214 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 EDEM1Q92611 657 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 SETDB2Q96T68 719 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 LPIN3Q9BQK8 851 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 BCL11AQ9H165 835 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 GGNBP2Q9H3C7 697 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 TPSG1Q9NRR2 321 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 FAM13BQ9NYF5 915 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 TLR7Q9NYK1 1049 aaKnown RBP2.96□□□□□ -1.94
SMN2-208ENST00000508258 USP35Q9P2H5 1018 aa2.96□□□□□ -1.94
SMN2-208ENST00000508258 FNDC3AQ9Y2H6 1198 aaKnown RBP2.96□□□□□ -1.94
SMN2-208ENST00000508258 SORBS3O60504 671 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 MMP20O60882 483 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 SELPP16109 830 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 NRLP54845 237 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 XPCQ01831 940 aaPredicted RBP2.95□□□□□ -1.94
SMN2-208ENST00000508258 DNM1Q05193 864 aaKnown RBP2.95□□□□□ -1.94
SMN2-208ENST00000508258 RAD51AP2Q09MP3 1159 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 MBTPS1Q14703 1052 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 TTC39BQ5VTQ0 682 aaPredicted RBP2.95□□□□□ -1.94
SMN2-208ENST00000508258 ALG1LQ6GMV1 187 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 XKR5Q6UX68 686 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 NLRP13Q86W25 1043 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 IL22RA1Q8N6P7 574 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 GPR152Q8TDT2 470 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 FBF1Q8TES7 1133 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 TP53INP1Q96A56 240 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 PLD4Q96BZ4 506 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 SPACA7Q96KW9 195 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 FAM161BQ96MY7 647 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 CSRNP1Q96S65 589 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 DNAJC25Q9H1X3 360 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 C11orf16Q9NQ32 467 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 METTL5Q9NRN9 209 aaKnown RBP2.95□□□□□ -1.94
SMN2-208ENST00000508258 FRRS1LQ9P0K9 344 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 KCNMB2Q9Y691 235 aa2.95□□□□□ -1.94
SMN2-208ENST00000508258 LOC102724428A0A0B4J2F2 783 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 PNMA6FA0A0J9YX94 578 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 FAM177BA6PVY3 158 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 EGFRP00533 1210 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 RPLP1P05386 114 aaKnown RBP2.94□□□□□ -1.94
SMN2-208ENST00000508258 CDC25BP30305 580 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 GNA15P30679 374 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 ITGAEP38570 1179 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 IREB2P48200 963 aaKnown RBP2.94□□□□□ -1.94
SMN2-208ENST00000508258 SIK1P57059 783 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 ATP2B2Q01814 1243 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 PSMD2Q13200 908 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 ADGRE1Q14246 886 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 TRIP4Q15650 581 aaPredicted RBP2.94□□□□□ -1.94
SMN2-208ENST00000508258 ZMYM1Q5SVZ6 1142 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 TXNRD3Q86VQ6 643 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 NCAPG2Q86XI2 1143 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 DTWD1Q8N5C7 304 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 TMEM87AQ8NBN3 555 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 NUDT16Q96DE0 195 aaKnown RBP2.94□□□□□ -1.94
SMN2-208ENST00000508258 FRMD6Q96NE9 622 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 TRIM33Q9UPN9 1127 aa2.94□□□□□ -1.94
SMN2-208ENST00000508258 A6NHS1 94 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 EIF1AYO14602 144 aaKnown RBP2.93□□□□□ -1.94
SMN2-208ENST00000508258 DYRK3O43781 588 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 SMNDC1O75940 238 aaKnown RBP eCLIP2.93□□□□□ -1.94
SMN2-208ENST00000508258 NEFLP07196 543 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 CTSHP09668 335 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 PCSK2P16519 638 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 ERCC5P28715 1186 aaPredicted RBP2.93□□□□□ -1.94
SMN2-208ENST00000508258 FANCCQ00597 558 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 HYAL2Q12891 473 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 ORC1Q13415 861 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 GRIK5Q16478 980 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 RSPO4Q2I0M5 234 aaPredicted RBP2.93□□□□□ -1.94
SMN2-208ENST00000508258 C8orf34Q49A92 452 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 NAALADL2Q58DX5 795 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 C9orf131Q5VYM1 1079 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 CEP135Q66GS9 1140 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 TXNDC11Q6PKC3 985 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 ZNF438Q7Z4V0 828 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 FBXO11Q86XK2 927 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 NT5DC4Q86YG4 428 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 Q8N3U1 123 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 SREK1Q8WXA9 508 aaKnown RBP2.93□□□□□ -1.94
SMN2-208ENST00000508258 LENG1Q96BZ8 264 aaPredicted RBP2.93□□□□□ -1.94
SMN2-208ENST00000508258 DRC1Q96MC2 740 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 LACRTQ9GZZ8 138 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms