RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 UFL1O94874 794 aa11.92□□□□□ -0.5
UBE2D3-223ENST00000508249 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
UBE2D3-223ENST00000508249 SREBF2Q12772 1141 aa11.92□□□□□ -0.5
UBE2D3-223ENST00000508249 CCDC27Q2M243 656 aa11.92□□□□□ -0.5
UBE2D3-223ENST00000508249 MXD3Q9BW11 206 aa11.92□□□□□ -0.5
UBE2D3-223ENST00000508249 PTPN22Q9Y2R2 807 aa11.92□□□□□ -0.5
UBE2D3-223ENST00000508249 WNT10BO00744 389 aa11.91□□□□□ -0.5
UBE2D3-223ENST00000508249 RPS8P62241 208 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-223ENST00000508249 INTS3Q68E01 1043 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-223ENST00000508249 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
UBE2D3-223ENST00000508249 CHMP4AQ9BY43 222 aa11.91□□□□□ -0.5
UBE2D3-223ENST00000508249 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
UBE2D3-223ENST00000508249 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 CCER2I3L3R5 266 aa11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 APAF1O14727 1248 aa11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 HOXB7P09629 217 aa11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 DACT2Q5SW24 774 aa11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 CD99L2Q8TCZ2 262 aa11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 ZBED3Q96IU2 234 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 ZC3H12CQ9C0D7 883 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 CHPF2Q9P2E5 772 aa11.9□□□□□ -0.5
UBE2D3-223ENST00000508249 ATP5J2-PTCD1G3V325 749 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 CHL1O00533 1208 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 SASH1O94885 1247 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 GJA5P36382 358 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 GNAI1P63096 354 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 PLBD2Q8NHP8 589 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 ZNF333Q96JL9 665 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 GGA1Q9UJY5 639 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 ARAP2Q8WZ64 1704 aa11.89□□□□□ -0.51
UBE2D3-223ENST00000508249 SPTBN5Q9NRC6 3674 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 EYSQ5T1H1 3165 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 VCANP13611 3396 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 IRS4O14654 1257 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 MAP3K11Q16584 847 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 CCDC184Q52MB2 194 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 PRO3102Q9H379 93 aa11.88□□□□□ -0.51
UBE2D3-223ENST00000508249 H0YGN5 161 aa11.87□□□□□ -0.51
UBE2D3-223ENST00000508249 TRIM28Q13263 835 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-223ENST00000508249 CRHR2Q13324 411 aa11.87□□□□□ -0.51
UBE2D3-223ENST00000508249 PRKG1Q13976 671 aa11.87□□□□□ -0.51
UBE2D3-223ENST00000508249 TTLL12Q14166 644 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-223ENST00000508249 WNK4Q96J92 1243 aa11.87□□□□□ -0.51
UBE2D3-223ENST00000508249 PTPN18Q99952 460 aa11.87□□□□□ -0.51
UBE2D3-223ENST00000508249 ALPK3Q96L96 1907 aa11.87□□□□□ -0.51
UBE2D3-223ENST00000508249 XDHP47989 1333 aa11.86□□□□□ -0.51
UBE2D3-223ENST00000508249 AOX1Q06278 1338 aa11.86□□□□□ -0.51
UBE2D3-223ENST00000508249 IL16Q14005 1332 aa11.86□□□□□ -0.51
UBE2D3-223ENST00000508249 MANSC4A6NHS7 340 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-223ENST00000508249 ALDH1A1P00352 501 aa11.86□□□□□ -0.51
UBE2D3-223ENST00000508249 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
UBE2D3-223ENST00000508249 PODNQ7Z5L7 613 aa11.86□□□□□ -0.51
UBE2D3-223ENST00000508249 ANKIB1Q9P2G1 1089 aa11.86□□□□□ -0.51
UBE2D3-223ENST00000508249 ZBTB48P10074 688 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-223ENST00000508249 TXNRD3Q86VQ6 643 aa11.85□□□□□ -0.51
UBE2D3-223ENST00000508249 SHISA4Q96DD7 197 aa11.85□□□□□ -0.51
UBE2D3-223ENST00000508249 ANGEL1Q9UNK9 670 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-223ENST00000508249 LAMA2P24043 3122 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-223ENST00000508249 DLL1O00548 723 aa11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 KLRK1P26718 216 aa11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 WDR63Q8IWG1 891 aa11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 PCDHAC2Q9Y5I4 1007 aa11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 PTCH2Q9Y6C5 1203 aa11.84□□□□□ -0.51
UBE2D3-223ENST00000508249 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 NF2P35240 595 aa11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 STRIP1Q5VSL9 837 aa11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 APOBEC3FQ8IUX4 373 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 WWC1Q8IX03 1113 aa11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 FAM9BQ8IZU0 186 aa11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 ZBTB38Q8NAP3 1195 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 CCDC85AQ96PX6 553 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 MYO3BQ8WXR4 1341 aa11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 IRS2Q9Y4H2 1338 aa11.83□□□□□ -0.52
UBE2D3-223ENST00000508249 ATP2B4P23634 1241 aa11.82□□□□□ -0.52
UBE2D3-223ENST00000508249 INHBEP58166 350 aa11.82□□□□□ -0.52
UBE2D3-223ENST00000508249 DIEXFQ68CQ4 756 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-223ENST00000508249 UBE2Q1Q7Z7E8 422 aa11.82□□□□□ -0.52
UBE2D3-223ENST00000508249 MBIPQ9NS73 344 aa11.82□□□□□ -0.52
UBE2D3-223ENST00000508249 G3V3G9 751 aa11.81□□□□□ -0.52
UBE2D3-223ENST00000508249 SP3Q02447 781 aa11.81□□□□□ -0.52
UBE2D3-223ENST00000508249 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
UBE2D3-223ENST00000508249 HDGFL1Q5TGJ6 251 aa11.81□□□□□ -0.52
UBE2D3-223ENST00000508249 CERS5Q8N5B7 392 aa11.81□□□□□ -0.52
UBE2D3-223ENST00000508249 JARID2Q92833 1246 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms