RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 LPIN2Q92539 896 aa25.6■■□□□ 1.69
HOXC9-203ENST00000508190 LEMD3Q9Y2U8 911 aa25.6■■□□□ 1.69
HOXC9-203ENST00000508190 C6orf229H3BNL8 230 aa25.59■■□□□ 1.69
HOXC9-203ENST00000508190 SOGA3Q5TF21 947 aa25.59■■□□□ 1.69
HOXC9-203ENST00000508190 PELP1Q8IZL8 1130 aaKnown RBP25.59■■□□□ 1.69
HOXC9-203ENST00000508190 DBNDD2Q9BQY9 259 aa25.59■■□□□ 1.69
HOXC9-203ENST00000508190 DBNLQ9UJU6 430 aaKnown RBP25.59■■□□□ 1.69
HOXC9-203ENST00000508190 SLC5A1P13866 664 aa25.58■■□□□ 1.69
HOXC9-203ENST00000508190 PDE4AP27815 886 aa25.58■■□□□ 1.69
HOXC9-203ENST00000508190 CHD4Q14839 1912 aa25.58■■□□□ 1.69
HOXC9-203ENST00000508190 SBF1O95248 1867 aa25.58■■□□□ 1.69
HOXC9-203ENST00000508190 IRS2Q9Y4H2 1338 aa25.58■■□□□ 1.68
HOXC9-203ENST00000508190 IFIT2P09913 472 aaKnown RBP25.58■■□□□ 1.68
HOXC9-203ENST00000508190 YBX3P16989 372 aaKnown RBP eCLIP25.58■■□□□ 1.68
HOXC9-203ENST00000508190 TXNRD3Q86VQ6 643 aa25.58■■□□□ 1.68
HOXC9-203ENST00000508190 RTKN2Q8IZC4 609 aa25.58■■□□□ 1.68
HOXC9-203ENST00000508190 XAGE2Q96GT9 111 aa25.58■■□□□ 1.68
HOXC9-203ENST00000508190 IFIT1P09914 478 aaKnown RBP25.57■■□□□ 1.68
HOXC9-203ENST00000508190 RTFDC1Q9BY42 306 aaPredicted RBP25.57■■□□□ 1.68
HOXC9-203ENST00000508190 AKAP11Q9UKA4 1901 aa25.56■■□□□ 1.68
HOXC9-203ENST00000508190 SALL3Q9BXA9 1300 aa25.55■■□□□ 1.68
HOXC9-203ENST00000508190 GRIPAP1Q4V328 841 aa25.55■■□□□ 1.68
HOXC9-203ENST00000508190 MED23Q9ULK4 1368 aa25.54■■□□□ 1.68
HOXC9-203ENST00000508190 GYG1P46976 350 aa25.54■■□□□ 1.68
HOXC9-203ENST00000508190 PSMD1Q99460 953 aa25.54■■□□□ 1.68
HOXC9-203ENST00000508190 DICER1Q9UPY3 1922 aaKnown RBP25.53■■□□□ 1.68
HOXC9-203ENST00000508190 NFKBIEO00221 500 aa25.53■■□□□ 1.68
HOXC9-203ENST00000508190 RIMBP2O15034 1052 aa25.53■■□□□ 1.68
HOXC9-203ENST00000508190 FKBP4Q02790 459 aaKnown RBP eCLIP25.53■■□□□ 1.68
HOXC9-203ENST00000508190 TSHZ3Q63HK5 1081 aa25.53■■□□□ 1.68
HOXC9-203ENST00000508190 RASSF7Q02833 373 aa25.53■■□□□ 1.68
HOXC9-203ENST00000508190 MX1P20591 662 aa25.52■■□□□ 1.68
HOXC9-203ENST00000508190 PHKA1P46020 1223 aa25.52■■□□□ 1.68
HOXC9-203ENST00000508190 BCAMP50895 628 aa25.52■■□□□ 1.68
HOXC9-203ENST00000508190 GORABQ5T7V8 394 aa25.52■■□□□ 1.68
HOXC9-203ENST00000508190 C15orf52Q6ZUT6 534 aaKnown RBP25.52■■□□□ 1.68
HOXC9-203ENST00000508190 FAM84BQ96KN1 310 aaPredicted RBP25.52■■□□□ 1.68
HOXC9-203ENST00000508190 TAOK3Q9H2K8 898 aa25.52■■□□□ 1.68
HOXC9-203ENST00000508190 ZNF277Q9NRM2 450 aaPredicted RBP25.52■■□□□ 1.68
HOXC9-203ENST00000508190 COL4A5P29400 1685 aa25.51■■□□□ 1.67
HOXC9-203ENST00000508190 WASHC4Q2M389 1173 aa25.51■■□□□ 1.67
HOXC9-203ENST00000508190 PLEKHM2Q8IWE5 1019 aa25.51■■□□□ 1.67
HOXC9-203ENST00000508190 SUPT20HQ8NEM7 779 aa25.51■■□□□ 1.67
HOXC9-203ENST00000508190 EYA3Q99504 573 aa25.51■■□□□ 1.67
HOXC9-203ENST00000508190 SCN9AQ15858 1988 aa25.51■■□□□ 1.67
HOXC9-203ENST00000508190 AK9Q5TCS8 1911 aa25.51■■□□□ 1.67
HOXC9-203ENST00000508190 MYO5AQ9Y4I1 1855 aaKnown RBP25.5■■□□□ 1.67
HOXC9-203ENST00000508190 AOC3Q16853 763 aa25.5■■□□□ 1.67
HOXC9-203ENST00000508190 CCDC102BQ68D86 513 aa25.5■■□□□ 1.67
HOXC9-203ENST00000508190 ARHGAP27Q6ZUM4 889 aa25.5■■□□□ 1.67
HOXC9-203ENST00000508190 RGS3P49796 1198 aa25.49■■□□□ 1.67
HOXC9-203ENST00000508190 GPR162Q16538 588 aa25.49■■□□□ 1.67
HOXC9-203ENST00000508190 CAVIN4Q5BKX8 364 aa25.49■■□□□ 1.67
HOXC9-203ENST00000508190 ZC3H12CQ9C0D7 883 aaKnown RBP25.49■■□□□ 1.67
HOXC9-203ENST00000508190 ZNF646O15015 1829 aaPredicted RBP25.48■■□□□ 1.67
HOXC9-203ENST00000508190 PSME4Q14997 1843 aa25.48■■□□□ 1.67
HOXC9-203ENST00000508190 PPIP5K2O43314 1243 aa25.48■■□□□ 1.67
HOXC9-203ENST00000508190 PDE1AP54750 535 aa25.48■■□□□ 1.67
HOXC9-203ENST00000508190 FBXO33Q7Z6M2 555 aa25.48■■□□□ 1.67
HOXC9-203ENST00000508190 LTBP3Q9NS15 1303 aa25.48■■□□□ 1.67
HOXC9-203ENST00000508190 HIBADHP31937 336 aaKnown RBP25.47■■□□□ 1.67
HOXC9-203ENST00000508190 PRELPP51888 382 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 CCDC158Q5M9N0 1113 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 TTC39AQ5SRH9 613 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 VPS37DQ86XT2 251 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 ECHDC1Q9NTX5 307 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 IQSEC3Q9UPP2 1182 aaPredicted RBP25.47■■□□□ 1.67
HOXC9-203ENST00000508190 UTRNP46939 3433 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 KIAA2012Q0VF49 1180 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 DOK7Q18PE1 504 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 ZNF804AQ7Z570 1209 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 GPATCH3Q96I76 525 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 STAP2Q9UGK3 403 aa25.47■■□□□ 1.67
HOXC9-203ENST00000508190 IARSP41252 1262 aaKnown RBP25.46■■□□□ 1.67
HOXC9-203ENST00000508190 DBNDD1Q9H9R9 158 aa25.46■■□□□ 1.67
HOXC9-203ENST00000508190 TTC41PQ6P2S7 1318 aa25.45■■□□□ 1.67
HOXC9-203ENST00000508190 COL1A1P02452 1464 aaPredicted RBP25.45■■□□□ 1.67
HOXC9-203ENST00000508190 SCARF1Q14162 830 aa25.45■■□□□ 1.66
HOXC9-203ENST00000508190 PI4K2BQ8TCG2 481 aa25.45■■□□□ 1.66
HOXC9-203ENST00000508190 CD209Q9NNX6 404 aa25.45■■□□□ 1.66
HOXC9-203ENST00000508190 TIAM2Q8IVF5 1701 aa25.45■■□□□ 1.66
HOXC9-203ENST00000508190 ARID4AP29374 1257 aaPredicted RBP25.44■■□□□ 1.66
HOXC9-203ENST00000508190 PI16Q6UXB8 463 aa25.43■■□□□ 1.66
HOXC9-203ENST00000508190 LARGE2Q8N3Y3 721 aa25.43■■□□□ 1.66
HOXC9-203ENST00000508190 NDUFB9Q9Y6M9 179 aa25.43■■□□□ 1.66
HOXC9-203ENST00000508190 MYH7P12883 1935 aa25.43■■□□□ 1.66
HOXC9-203ENST00000508190 UQCRFS1P1P0C7P4 283 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 ATP5JP18859 108 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 MCAMP43121 646 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 RASGRF1Q13972 1273 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 COA1Q9GZY4 146 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 BOLA2Q9H3K6 86 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 OSBPL3Q9H4L5 887 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 G3V3G9 751 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 ECE2O60344 883 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 DCAF8Q5TAQ9 597 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 TDRD7Q8NHU6 1098 aaKnown RBP25.42■■□□□ 1.66
HOXC9-203ENST00000508190 VPS33BQ9H267 617 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 SNRKQ9NRH2 765 aa25.42■■□□□ 1.66
HOXC9-203ENST00000508190 GNL3LQ9NVN8 582 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms