RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 RASGRP4Q8TDF6 673 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 HERPUD2Q9BSE4 406 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 RTFDC1Q9BY42 306 aaPredicted RBP8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 PGAP2Q9UHJ9 254 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 CECR2Q9BXF3 1484 aa8.98□□□□□ -0.97
PDGFRA-206ENST00000508170 CHL1O00533 1208 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 KATNA1O75449 491 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 THNSL2Q86YJ6 484 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 ACRBPQ8NEB7 543 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 APPL2Q8NEU8 664 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 RANBP17Q9H2T7 1088 aaKnown RBP8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 PRDM4Q9UKN5 801 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 KLRG2A4D1S0 409 aaPredicted RBP8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 DKK1O94907 266 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 AGR2O95994 175 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 U2AF1L5P0DN76 240 aaPredicted RBP8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 PSMA3P25788 255 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 HMGN5P82970 282 aaKnown RBP8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 U2AF1Q01081 240 aaKnown RBP eCLIP8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 KIAA1614Q5VZ46 1190 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 TCEAL8Q8IYN2 117 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 TIFAQ96CG3 184 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 BORCS6Q96GS4 357 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 USP25Q9UHP3 1055 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 CD2APQ9Y5K6 639 aa8.97□□□□□ -0.97
PDGFRA-206ENST00000508170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 GTPBP10A4D1E9 387 aaKnown RBP8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 TPM2P07951 284 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 FBXO45P0C2W1 286 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 NBPF7P0C2Y1 421 aaPredicted RBP8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 STAT3P40763 770 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 PURAQ00577 322 aaKnown RBP8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 EN1Q05925 392 aaPredicted RBP8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 MROH2BQ7Z745 1585 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 ATXN2LQ8WWM7 1075 aaKnown RBP8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 TBC1D31Q96DN5 1066 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 EYA1Q99502 592 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 NBPF3Q9H094 633 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 SAGE1Q9NXZ1 904 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 MORC2Q9Y6X9 1032 aaPredicted RBP8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 UNC13AQ9UPW8 1703 aa8.96□□□□□ -0.97
PDGFRA-206ENST00000508170 C19orf81C9J6K1 198 aa8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 IPO5O00410 1097 aaKnown RBP8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 DDX10Q13206 875 aaKnown RBP8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 PICALMQ13492 652 aa8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 PIN1Q13526 163 aaPredicted RBP8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 DCTN1Q14203 1278 aa8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 ARL6IP6Q8N6S5 226 aa8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 CHAC2Q8WUX2 184 aa8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 ATG3Q9NT62 314 aa8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 ZRANB1Q9UGI0 708 aa8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 KIAA1024Q9UPX6 916 aa8.96□□□□□ -0.98
PDGFRA-206ENST00000508170 TRIM27P14373 513 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 GLULP15104 373 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 ANP32AP39687 249 aaKnown RBP8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 NFKB2Q00653 900 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 IFT88Q13099 833 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 CCDC73Q6ZRK6 1079 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 SMARCC1Q92922 1105 aaPredicted RBP8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 KIF12Q96FN5 646 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 SEC16BQ96JE7 1060 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 MCM8Q9UJA3 840 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 WASLO00401 505 aaPredicted RBP8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 BAIAP3O94812 1187 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 NASPP49321 788 aaPredicted RBP8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 RENBPP51606 427 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 GUCY2FP51841 1108 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 SFSWAPQ12872 951 aaKnown RBP8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 PDE1CQ14123 709 aaPredicted RBP8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 FAM102BQ5T8I3 360 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 NXNQ6DKJ4 435 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 SMAD5Q99717 465 aaKnown RBP8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 NUDT12Q9BQG2 462 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 RABL2BQ9UNT1 228 aa8.95□□□□□ -0.98
PDGFRA-206ENST00000508170 DSG3P32926 999 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 BCAMP50895 628 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 C11orf74Q86VG3 221 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 MAGEB6Q8N7X4 407 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 ZNF713Q8N859 430 aaPredicted RBP8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 FLCNQ8NFG4 579 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 CENPTQ96BT3 561 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 C22orf23Q9BZE7 217 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 RBSNQ9H1K0 784 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 CNNM2Q9H8M5 875 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 MSRB2Q9Y3D2 182 aa8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 V9GY48 417 aaPredicted RBP8.94□□□□□ -0.98
PDGFRA-206ENST00000508170 NPR3P17342 541 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 C21orf62-AS1Q17RA5 79 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 GFOD2Q3B7J2 385 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 ERFEQ4G0M1 354 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 CCDC158Q5M9N0 1113 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 PNMA8AQ86V59 439 aaPredicted RBP8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 UBR7Q8N806 425 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 NKAIN3Q8N8D7 197 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 ZFPM2Q8WW38 1151 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 DMRTB1Q96MA1 342 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 PURBQ96QR8 312 aaKnown RBP8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 MAP3K14Q99558 947 aa8.93□□□□□ -0.98
PDGFRA-206ENST00000508170 DNAAF2Q9NVR5 837 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms