RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
PTPN13-207ENST00000508063 RBM26Q5T8P6 1007 aaKnown RBP14.08□□□□□ -0.16
PTPN13-207ENST00000508063 USP17L1Q7RTZ2 530 aa14.08□□□□□ -0.16
PTPN13-207ENST00000508063 ZNF408Q9H9D4 720 aa14.08□□□□□ -0.16
PTPN13-207ENST00000508063 PRDM10Q9NQV6 1147 aa14.08□□□□□ -0.16
PTPN13-207ENST00000508063 PSME4Q14997 1843 aa14.08□□□□□ -0.16
PTPN13-207ENST00000508063 SCN9AQ15858 1988 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 ANKRD18BA2A2Z9 1011 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 FAM161AQ3B820 660 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 CYP4F22Q6NT55 531 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 KRT26Q7Z3Y9 468 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 SAPCD2Q86UD0 394 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 USP48Q86UV5 1035 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 BEGAINQ9BUH8 593 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 COA1Q9GZY4 146 aa14.07□□□□□ -0.16
PTPN13-207ENST00000508063 F6X3S4 739 aa14.06□□□□□ -0.16
PTPN13-207ENST00000508063 MAP2K2P36507 400 aa14.06□□□□□ -0.16
PTPN13-207ENST00000508063 ZNF280AP59817 542 aaPredicted RBP14.06□□□□□ -0.16
PTPN13-207ENST00000508063 GRM1Q13255 1194 aa14.06□□□□□ -0.16
PTPN13-207ENST00000508063 IFIT5Q13325 482 aaKnown RBP14.06□□□□□ -0.16
PTPN13-207ENST00000508063 BEND3Q5T5X7 828 aa14.06□□□□□ -0.16
PTPN13-207ENST00000508063 SULF1Q8IWU6 871 aa14.06□□□□□ -0.16
PTPN13-207ENST00000508063 ALDH1L1O75891 902 aa14.05□□□□□ -0.16
PTPN13-207ENST00000508063 USP17L8P0C7I0 530 aa14.05□□□□□ -0.16
PTPN13-207ENST00000508063 KCNJ4P48050 445 aa14.05□□□□□ -0.16
PTPN13-207ENST00000508063 MMP14P50281 582 aa14.05□□□□□ -0.16
PTPN13-207ENST00000508063 C9orf78Q9NZ63 289 aaPredicted RBP14.05□□□□□ -0.16
PTPN13-207ENST00000508063 CHMP3Q9Y3E7 222 aa14.05□□□□□ -0.16
PTPN13-207ENST00000508063 ZNF804BA4D1E1 1349 aa14.05□□□□□ -0.16
PTPN13-207ENST00000508063 MYO3BQ8WXR4 1341 aa14.05□□□□□ -0.16
PTPN13-207ENST00000508063 THSD7BQ9C0I4 1608 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 GRM8O00222 908 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 EGFRP00533 1210 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 STRIP1Q5VSL9 837 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 OGFOD1Q8N543 542 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 C2orf69Q8N8R5 385 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 MYOZ2Q9NPC6 264 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 GGA3Q9NZ52 723 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 ZNF521Q96K83 1311 aa14.04□□□□□ -0.16
PTPN13-207ENST00000508063 POLR2AP24928 1970 aaKnown RBP14.03□□□□□ -0.16
PTPN13-207ENST00000508063 E9PSI1 815 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 FOXO4P98177 505 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 CHRNDQ07001 517 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 CCDC57Q2TAC2 916 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 TAF7LQ5H9L4 462 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 SLC4A10Q6U841 1118 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 FBXW7Q969H0 707 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 GMLQ99445 158 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 SRCIN1Q9C0H9 1055 aa14.03□□□□□ -0.16
PTPN13-207ENST00000508063 PITPNM2Q9BZ72 1349 aa14.02□□□□□ -0.17
PTPN13-207ENST00000508063 CA12O43570 354 aa14.02□□□□□ -0.17
PTPN13-207ENST00000508063 LBX1P52954 281 aa14.02□□□□□ -0.17
PTPN13-207ENST00000508063 HUNKP57058 714 aa14.02□□□□□ -0.17
PTPN13-207ENST00000508063 SCARF1Q14162 830 aa14.02□□□□□ -0.17
PTPN13-207ENST00000508063 DACT2Q5SW24 774 aa14.02□□□□□ -0.17
PTPN13-207ENST00000508063 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.17
PTPN13-207ENST00000508063 GBA2Q9HCG7 927 aaPredicted RBP14.02□□□□□ -0.17
PTPN13-207ENST00000508063 WTIPA6NIX2 430 aaPredicted RBP14.01□□□□□ -0.17
PTPN13-207ENST00000508063 ADM5C9JUS6 153 aa14.01□□□□□ -0.17
PTPN13-207ENST00000508063 HSPA8P11142 646 aaKnown RBP14.01□□□□□ -0.17
PTPN13-207ENST00000508063 BRPF1P55201 1214 aaPredicted RBP14.01□□□□□ -0.17
PTPN13-207ENST00000508063 NOGQ13253 232 aa14.01□□□□□ -0.17
PTPN13-207ENST00000508063 ANGEL2Q5VTE6 544 aaKnown RBP14.01□□□□□ -0.17
PTPN13-207ENST00000508063 TTLL5Q6EMB2 1281 aa14.01□□□□□ -0.17
PTPN13-207ENST00000508063 HDAC9Q9UKV0 1011 aa14.01□□□□□ -0.17
PTPN13-207ENST00000508063 PTPRCP08575 1304 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 SPDYE2BA6NHP3 402 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 AOC2O75106 756 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 SPDYE6P0CI01 402 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 SPDYE2Q495Y8 402 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 RGMBQ6NW40 437 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 LDHAL6AQ6ZMR3 332 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 C15orf52Q6ZUT6 534 aaKnown RBP14□□□□□ -0.17
PTPN13-207ENST00000508063 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 CCDC102AQ96A19 550 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 CNNM1Q9NRU3 951 aa14□□□□□ -0.17
PTPN13-207ENST00000508063 ZNF804AQ7Z570 1209 aa13.99□□□□□ -0.17
PTPN13-207ENST00000508063 CDCA5Q96FF9 252 aa13.99□□□□□ -0.17
PTPN13-207ENST00000508063 CD209Q9NNX6 404 aa13.99□□□□□ -0.17
PTPN13-207ENST00000508063 ASTN2O75129 1339 aaPredicted RBP13.98□□□□□ -0.17
PTPN13-207ENST00000508063 FKBP1BP68106 108 aa13.98□□□□□ -0.17
PTPN13-207ENST00000508063 GTF2IP78347 998 aa13.98□□□□□ -0.17
PTPN13-207ENST00000508063 SLFN5Q08AF3 891 aa13.98□□□□□ -0.17
PTPN13-207ENST00000508063 DLK2Q6UY11 383 aa13.98□□□□□ -0.17
PTPN13-207ENST00000508063 MRPL50Q8N5N7 158 aaKnown RBP13.98□□□□□ -0.17
PTPN13-207ENST00000508063 TAF5LO75529 589 aa13.97□□□□□ -0.17
PTPN13-207ENST00000508063 KLRK1P26718 216 aa13.97□□□□□ -0.17
PTPN13-207ENST00000508063 ZNF157P51786 506 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-207ENST00000508063 EPHA10Q5JZY3 1008 aa13.97□□□□□ -0.17
PTPN13-207ENST00000508063 HELBQ8NG08 1087 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-207ENST00000508063 MXD3Q9BW11 206 aa13.97□□□□□ -0.17
PTPN13-207ENST00000508063 ZNF646O15015 1829 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-207ENST00000508063 UTYO14607 1347 aa13.96□□□□□ -0.17
PTPN13-207ENST00000508063 CCER2I3L3R5 266 aa13.96□□□□□ -0.17
PTPN13-207ENST00000508063 WNT10BO00744 389 aa13.96□□□□□ -0.17
PTPN13-207ENST00000508063 PLIN1O60240 522 aa13.96□□□□□ -0.17
PTPN13-207ENST00000508063 NF2P35240 595 aa13.96□□□□□ -0.17
PTPN13-207ENST00000508063 NBPF9Q3BBW0 867 aa13.96□□□□□ -0.17
PTPN13-207ENST00000508063 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.17
PTPN13-207ENST00000508063 KIAA0825Q8IV33 1275 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms