RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 AFDNP55196 1824 aaKnown RBP15.71■□□□□ 0.11
SNCAIP-209ENST00000508017 NBPF11Q86T75 865 aa15.71■□□□□ 0.11
SNCAIP-209ENST00000508017 MORC2Q9Y6X9 1032 aaPredicted RBP15.71■□□□□ 0.11
SNCAIP-209ENST00000508017 GCP02774 474 aa15.7■□□□□ 0.1
SNCAIP-209ENST00000508017 ZNF790Q6PG37 636 aa15.7■□□□□ 0.1
SNCAIP-209ENST00000508017 ZNF771Q7L3S4 317 aaPredicted RBP15.7■□□□□ 0.1
SNCAIP-209ENST00000508017 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
SNCAIP-209ENST00000508017 AXIN2Q9Y2T1 843 aa15.7■□□□□ 0.1
SNCAIP-209ENST00000508017 RFX7Q2KHR2 1363 aa15.7■□□□□ 0.1
SNCAIP-209ENST00000508017 ELF2Q15723 593 aa15.7■□□□□ 0.1
SNCAIP-209ENST00000508017 CEP57L1Q8IYX8 460 aa15.7■□□□□ 0.1
SNCAIP-209ENST00000508017 A0A1B0GVL5 298 aa15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 ATP5J2-PTCD1G3V325 749 aa15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 PTCD1O75127 700 aaKnown RBP15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 EXOSC10Q01780 885 aaKnown RBP15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 KBTBD3Q8NAB2 608 aa15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 ZNF397Q8NF99 534 aaPredicted RBP15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 ZNF396Q96N95 335 aaPredicted RBP15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 PCDHA7Q9UN72 937 aa15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 SALL1Q9NSC2 1324 aa15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 GOLIM4O00461 696 aa15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 FBXO38Q6PIJ6 1188 aa15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 FMR1NBQ8N0W7 255 aaPredicted RBP15.69■□□□□ 0.1
SNCAIP-209ENST00000508017 ADAMTS7Q9UKP4 1686 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 OTUD7BQ6GQQ9 843 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 ANKRD13DQ6ZTN6 518 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 RGPD5Q99666 1765 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 ABCC6O95255 1503 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 E7EWF7 191 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 HMGB1P09429 215 aaKnown RBP15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 SLFN14P0C7P3 912 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 PDIA3P30101 505 aaKnown RBP15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 DPCR1Q3MIW9 517 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 LMOD2Q6P5Q4 547 aa15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 GPHNQ9NQX3 736 aaPredicted RBP15.68■□□□□ 0.1
SNCAIP-209ENST00000508017 CARMIL3Q8ND23 1372 aa15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 NPHP1O15259 732 aa15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 NDUFA8P51970 172 aa15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 GABPB1Q06547 395 aaPredicted RBP15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 LRP10Q7Z4F1 713 aa15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 MRPS27Q92552 414 aaKnown RBP15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 ZNF496Q96IT1 587 aaPredicted RBP15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 AGXT2Q9BYV1 514 aa15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 FDPSP14324 419 aaKnown RBP15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 E4F1Q66K89 784 aaPredicted RBP15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 NFATC2IPQ8NCF5 419 aa15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 ERO1AQ96HE7 468 aa15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 SDF4Q9BRK5 362 aa15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 KDM6AO15550 1401 aaPredicted RBP15.67■□□□□ 0.1
SNCAIP-209ENST00000508017 TTLL5Q6EMB2 1281 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 LRRN4CLQ8ND94 238 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 NEUROD6Q96NK8 337 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 XPO4Q9C0E2 1151 aaKnown RBP15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 NEDD4P46934 1319 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 A0A087WZG4 1122 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 ARMCX5Q6P1M9 558 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 OSBPL5Q9H0X9 879 aaPredicted RBP15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 PAG1Q9NWQ8 432 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 IFNKQ9P0W0 207 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 CLIC4Q9Y696 253 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 CAMTA1Q9Y6Y1 1673 aa15.66■□□□□ 0.1
SNCAIP-209ENST00000508017 PALLDQ8WX93 1383 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 BIN1O00499 593 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 SMC2O95347 1197 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 SLU7O95391 586 aaKnown RBP15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 HSPD1P10809 573 aaKnown RBP15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 ATL3Q6DD88 541 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 TMC6Q7Z403 805 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 DSCC1Q9BVC3 393 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 NAT10Q9H0A0 1025 aaKnown RBP15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 SCN11AQ9UI33 1791 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 ARFGEF2Q9Y6D5 1785 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 GSDMDP57764 484 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 TIMM10P62072 90 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 LMBR1LQ6UX01 489 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 KRT222Q8N1A0 295 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 PPP1R13BQ96KQ4 1090 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 FMNL2Q96PY5 1086 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 ST7Q9NRC1 585 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 KCND1Q9NSA2 647 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 GJB4Q9NTQ9 266 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 ZNF446Q9NWS9 450 aa15.65■□□□□ 0.1
SNCAIP-209ENST00000508017 MAST3O60307 1309 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 POLR3DP05423 398 aaPredicted RBP15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 ZMYM1Q5SVZ6 1142 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 ADALQ6DHV7 355 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 ORAI2Q96SN7 254 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 HELLSQ9NRZ9 838 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 RTEL1Q9NZ71 1219 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 KIAA1468Q9P260 1216 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 CASP7P55210 303 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 LINC00301Q8NCQ3 95 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 FAM53CQ9NYF3 392 aa15.64■□□□□ 0.09
SNCAIP-209ENST00000508017 FER1L4A9Z1Z3 1794 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 SLIT3O75094 1523 aa15.63■□□□□ 0.09
SNCAIP-209ENST00000508017 SYT10Q6XYQ8 523 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms