RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
PTPN13-206ENST00000507902 HELBQ8NG08 1087 aaPredicted RBP17.25■□□□□ 0.35
PTPN13-206ENST00000507902 ADARB2Q9NS39 739 aaKnown RBP17.25■□□□□ 0.35
PTPN13-206ENST00000507902 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
PTPN13-206ENST00000507902 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
PTPN13-206ENST00000507902 H7C1D1 291 aa17.24■□□□□ 0.35
PTPN13-206ENST00000507902 PDE8BO95263 885 aa17.24■□□□□ 0.35
PTPN13-206ENST00000507902 RFX5P48382 616 aaPredicted RBP17.24■□□□□ 0.35
PTPN13-206ENST00000507902 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
PTPN13-206ENST00000507902 PUM3Q15397 648 aaKnown RBP17.24■□□□□ 0.35
PTPN13-206ENST00000507902 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
PTPN13-206ENST00000507902 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
PTPN13-206ENST00000507902 PUS3Q9BZE2 481 aaKnown RBP17.24■□□□□ 0.35
PTPN13-206ENST00000507902 DDX19BQ9UMR2 479 aa17.24■□□□□ 0.35
PTPN13-206ENST00000507902 SCN9AQ15858 1988 aa17.23■□□□□ 0.35
PTPN13-206ENST00000507902 VIL1P09327 827 aaKnown RBP17.23■□□□□ 0.35
PTPN13-206ENST00000507902 RLBP1P12271 317 aa17.23■□□□□ 0.35
PTPN13-206ENST00000507902 IL15P40933 162 aaPredicted RBP17.23■□□□□ 0.35
PTPN13-206ENST00000507902 CHADLQ6NUI6 762 aa17.23■□□□□ 0.35
PTPN13-206ENST00000507902 AGBL3Q8NEM8 1001 aa17.23■□□□□ 0.35
PTPN13-206ENST00000507902 COPRSQ9NQ92 184 aa17.23■□□□□ 0.35
PTPN13-206ENST00000507902 IFIT1P09914 478 aaKnown RBP17.22■□□□□ 0.35
PTPN13-206ENST00000507902 MMP14P50281 582 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 PDE3AQ14432 1141 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
PTPN13-206ENST00000507902 LRRC24Q50LG9 513 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 CAVIN4Q5BKX8 364 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 STRIP1Q5VSL9 837 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 RSBN1LQ6PCB5 846 aaPredicted RBP17.22■□□□□ 0.35
PTPN13-206ENST00000507902 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 PANK1Q8TE04 598 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 ADAMTSL1Q8N6G6 1762 aa17.22■□□□□ 0.35
PTPN13-206ENST00000507902 ZBTB7BO15156 539 aaPredicted RBP17.21■□□□□ 0.35
PTPN13-206ENST00000507902 EPS15P42566 896 aa17.21■□□□□ 0.35
PTPN13-206ENST00000507902 TXNRD3Q86VQ6 643 aa17.21■□□□□ 0.35
PTPN13-206ENST00000507902 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
PTPN13-206ENST00000507902 VGLL2Q8N8G2 317 aa17.21■□□□□ 0.35
PTPN13-206ENST00000507902 SIL1Q9H173 461 aa17.21■□□□□ 0.35
PTPN13-206ENST00000507902 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
PTPN13-206ENST00000507902 CEP126Q9P2H0 1117 aa17.21■□□□□ 0.35
PTPN13-206ENST00000507902 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.35
PTPN13-206ENST00000507902 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
PTPN13-206ENST00000507902 IRS2Q9Y4H2 1338 aa17.21■□□□□ 0.34
PTPN13-206ENST00000507902 WTIPA6NIX2 430 aaPredicted RBP17.2■□□□□ 0.34
PTPN13-206ENST00000507902 SLC5A1P13866 664 aa17.2■□□□□ 0.34
PTPN13-206ENST00000507902 IL1R1P14778 569 aa17.2■□□□□ 0.34
PTPN13-206ENST00000507902 HSPA6P17066 643 aa17.2■□□□□ 0.34
PTPN13-206ENST00000507902 KLRK1P26718 216 aa17.2■□□□□ 0.34
PTPN13-206ENST00000507902 OGFOD1Q8N543 542 aa17.2■□□□□ 0.34
PTPN13-206ENST00000507902 LPIN2Q92539 896 aa17.2■□□□□ 0.34
PTPN13-206ENST00000507902 FBXW7Q969H0 707 aa17.2■□□□□ 0.34
PTPN13-206ENST00000507902 HIBADHP31937 336 aaKnown RBP17.19■□□□□ 0.34
PTPN13-206ENST00000507902 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
PTPN13-206ENST00000507902 ZC3H15Q8WU90 426 aaKnown RBP17.19■□□□□ 0.34
PTPN13-206ENST00000507902 KCNQ5Q9NR82 932 aa17.19■□□□□ 0.34
PTPN13-206ENST00000507902 ZBTB12Q9Y330 459 aaPredicted RBP17.19■□□□□ 0.34
PTPN13-206ENST00000507902 SNAP23O00161 211 aa17.18■□□□□ 0.34
PTPN13-206ENST00000507902 USP17L8P0C7I0 530 aa17.18■□□□□ 0.34
PTPN13-206ENST00000507902 APLP1P51693 650 aa17.18■□□□□ 0.34
PTPN13-206ENST00000507902 DACT2Q5SW24 774 aa17.18■□□□□ 0.34
PTPN13-206ENST00000507902 ATG9AQ7Z3C6 839 aa17.18■□□□□ 0.34
PTPN13-206ENST00000507902 AKAP2Q9Y2D5 859 aa17.18■□□□□ 0.34
PTPN13-206ENST00000507902 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
PTPN13-206ENST00000507902 GTF2IP78347 998 aa17.17■□□□□ 0.34
PTPN13-206ENST00000507902 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
PTPN13-206ENST00000507902 HDAC9Q9UKV0 1011 aa17.17■□□□□ 0.34
PTPN13-206ENST00000507902 PA2G4Q9UQ80 394 aaKnown RBP17.17■□□□□ 0.34
PTPN13-206ENST00000507902 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
PTPN13-206ENST00000507902 SASH1O94885 1247 aa17.16■□□□□ 0.34
PTPN13-206ENST00000507902 POTEIP0CG38 1075 aa17.16■□□□□ 0.34
PTPN13-206ENST00000507902 POTEJP0CG39 1038 aa17.16■□□□□ 0.34
PTPN13-206ENST00000507902 GYG1P46976 350 aa17.16■□□□□ 0.34
PTPN13-206ENST00000507902 ATP8B2P98198 1209 aa17.16■□□□□ 0.34
PTPN13-206ENST00000507902 G3BP1Q13283 466 aaKnown RBP eCLIP17.16■□□□□ 0.34
PTPN13-206ENST00000507902 SSH3Q8TE77 659 aa17.16■□□□□ 0.34
PTPN13-206ENST00000507902 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
PTPN13-206ENST00000507902 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
PTPN13-206ENST00000507902 ZNF646O15015 1829 aaPredicted RBP17.16■□□□□ 0.34
PTPN13-206ENST00000507902 PNMA6EA0A0J9YXQ4 647 aa17.15■□□□□ 0.34
PTPN13-206ENST00000507902 HMMRO75330 724 aa17.15■□□□□ 0.34
PTPN13-206ENST00000507902 FGFR2P21802 821 aa17.15■□□□□ 0.34
PTPN13-206ENST00000507902 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
PTPN13-206ENST00000507902 OS9Q13438 667 aaPredicted RBP17.15■□□□□ 0.34
PTPN13-206ENST00000507902 KIF4BQ2VIQ3 1234 aa17.15■□□□□ 0.34
PTPN13-206ENST00000507902 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
PTPN13-206ENST00000507902 GMLQ99445 158 aa17.15■□□□□ 0.34
PTPN13-206ENST00000507902 C1orf115Q9H7X2 142 aa17.15■□□□□ 0.34
PTPN13-206ENST00000507902 GNL3LQ9NVN8 582 aaKnown RBP17.15■□□□□ 0.34
PTPN13-206ENST00000507902 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
PTPN13-206ENST00000507902 POLA2Q14181 598 aa17.14■□□□□ 0.33
PTPN13-206ENST00000507902 FBXO33Q7Z6M2 555 aa17.14■□□□□ 0.33
PTPN13-206ENST00000507902 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
PTPN13-206ENST00000507902 TBC1D22AQ8WUA7 517 aa17.14■□□□□ 0.33
PTPN13-206ENST00000507902 FAM205AQ6ZU69 1335 aa17.14■□□□□ 0.33
PTPN13-206ENST00000507902 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
PTPN13-206ENST00000507902 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
PTPN13-206ENST00000507902 CEP85Q6P2H3 762 aa17.13■□□□□ 0.33
PTPN13-206ENST00000507902 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
PTPN13-206ENST00000507902 MYOZ2Q9NPC6 264 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms