RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 VPS37DQ86XT2 251 aa19.52■□□□□ 0.72
COL1A1-211ENST00000507689 OGFOD1Q8N543 542 aa19.52■□□□□ 0.72
COL1A1-211ENST00000507689 MYO3BQ8WXR4 1341 aa19.51■□□□□ 0.71
COL1A1-211ENST00000507689 MS4A1P11836 297 aa19.51■□□□□ 0.71
COL1A1-211ENST00000507689 UBE4AQ14139 1066 aa19.51■□□□□ 0.71
COL1A1-211ENST00000507689 ZC3H15Q8WU90 426 aaKnown RBP19.51■□□□□ 0.71
COL1A1-211ENST00000507689 KCNQ5Q9NR82 932 aa19.51■□□□□ 0.71
COL1A1-211ENST00000507689 LRRFIP2Q9Y608 721 aaKnown RBP19.51■□□□□ 0.71
COL1A1-211ENST00000507689 RBM26Q5T8P6 1007 aaKnown RBP19.5■□□□□ 0.71
COL1A1-211ENST00000507689 STRIP1Q5VSL9 837 aa19.5■□□□□ 0.71
COL1A1-211ENST00000507689 TTLL5Q6EMB2 1281 aa19.5■□□□□ 0.71
COL1A1-211ENST00000507689 USP17L8P0C7I0 530 aa19.49■□□□□ 0.71
COL1A1-211ENST00000507689 CAVIN4Q5BKX8 364 aa19.49■□□□□ 0.71
COL1A1-211ENST00000507689 C15orf52Q6ZUT6 534 aaKnown RBP19.49■□□□□ 0.71
COL1A1-211ENST00000507689 MEIS3Q99687 375 aa19.49■□□□□ 0.71
COL1A1-211ENST00000507689 HDAC9Q9UKV0 1011 aa19.49■□□□□ 0.71
COL1A1-211ENST00000507689 WTIPA6NIX2 430 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-211ENST00000507689 FRAT2O75474 233 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-211ENST00000507689 GNAI2P04899 355 aa19.48■□□□□ 0.71
COL1A1-211ENST00000507689 MMP14P50281 582 aa19.48■□□□□ 0.71
COL1A1-211ENST00000507689 TBC1D10BQ4KMP7 808 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-211ENST00000507689 DZIP1LQ8IYY4 767 aaKnown RBP19.48■□□□□ 0.71
COL1A1-211ENST00000507689 DCPSQ96C86 337 aaKnown RBP19.48■□□□□ 0.71
COL1A1-211ENST00000507689 PUS3Q9BZE2 481 aaKnown RBP19.48■□□□□ 0.71
COL1A1-211ENST00000507689 CD209Q9NNX6 404 aa19.48■□□□□ 0.71
COL1A1-211ENST00000507689 CREBZFQ9NS37 354 aa19.48■□□□□ 0.71
COL1A1-211ENST00000507689 FBXO3Q9UK99 471 aa19.48■□□□□ 0.71
COL1A1-211ENST00000507689 RIPOR2Q9Y4F9 1068 aa19.48■□□□□ 0.71
COL1A1-211ENST00000507689 TMEM88BA6NKF7 163 aa19.47■□□□□ 0.71
COL1A1-211ENST00000507689 GTF2IP78347 998 aa19.47■□□□□ 0.71
COL1A1-211ENST00000507689 KIF4BQ2VIQ3 1234 aa19.47■□□□□ 0.71
COL1A1-211ENST00000507689 SAMD7Q7Z3H4 446 aa19.47■□□□□ 0.71
COL1A1-211ENST00000507689 TXNRD3Q86VQ6 643 aa19.47■□□□□ 0.71
COL1A1-211ENST00000507689 ITPRIPQ8IWB1 547 aa19.47■□□□□ 0.71
COL1A1-211ENST00000507689 EYA2O00167 538 aa19.46■□□□□ 0.71
COL1A1-211ENST00000507689 PDE8BO95263 885 aa19.46■□□□□ 0.71
COL1A1-211ENST00000507689 ITGBL1O95965 494 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-211ENST00000507689 IFIT1P09914 478 aaKnown RBP19.46■□□□□ 0.71
COL1A1-211ENST00000507689 KLRK1P26718 216 aa19.46■□□□□ 0.71
COL1A1-211ENST00000507689 HIBADHP31937 336 aaKnown RBP19.46■□□□□ 0.71
COL1A1-211ENST00000507689 LRRC24Q50LG9 513 aa19.46■□□□□ 0.71
COL1A1-211ENST00000507689 CDC37L1Q7L3B6 337 aa19.46■□□□□ 0.71
COL1A1-211ENST00000507689 KLHDC4Q8TBB5 520 aa19.46■□□□□ 0.71
COL1A1-211ENST00000507689 SNAP23O00161 211 aa19.45■□□□□ 0.7
COL1A1-211ENST00000507689 PUM3Q15397 648 aaKnown RBP19.45■□□□□ 0.7
COL1A1-211ENST00000507689 DACT2Q5SW24 774 aa19.45■□□□□ 0.7
COL1A1-211ENST00000507689 TMEM57Q8N5G2 664 aa19.45■□□□□ 0.7
COL1A1-211ENST00000507689 TRPM4Q8TD43 1214 aa19.45■□□□□ 0.7
COL1A1-211ENST00000507689 SIL1Q9H173 461 aa19.45■□□□□ 0.7
COL1A1-211ENST00000507689 CEP126Q9P2H0 1117 aa19.45■□□□□ 0.7
COL1A1-211ENST00000507689 PASKQ96RG2 1323 aa19.45■□□□□ 0.7
COL1A1-211ENST00000507689 SRGAP3O43295 1099 aa19.44■□□□□ 0.7
COL1A1-211ENST00000507689 SLC5A1P13866 664 aa19.44■□□□□ 0.7
COL1A1-211ENST00000507689 HTRA3P83110 453 aa19.44■□□□□ 0.7
COL1A1-211ENST00000507689 MYOZ2Q9NPC6 264 aa19.44■□□□□ 0.7
COL1A1-211ENST00000507689 ABT1Q9ULW3 272 aaKnown RBP19.44■□□□□ 0.7
COL1A1-211ENST00000507689 ZNF609O15014 1411 aa19.43■□□□□ 0.7
COL1A1-211ENST00000507689 SHTN1A0MZ66 631 aa19.43■□□□□ 0.7
COL1A1-211ENST00000507689 CIAO1O76071 339 aa19.43■□□□□ 0.7
COL1A1-211ENST00000507689 IL1R1P14778 569 aa19.43■□□□□ 0.7
COL1A1-211ENST00000507689 IL15P40933 162 aaPredicted RBP19.43■□□□□ 0.7
COL1A1-211ENST00000507689 ZNF280AP59817 542 aaPredicted RBP19.43■□□□□ 0.7
COL1A1-211ENST00000507689 PTPN12Q05209 780 aaKnown RBP19.43■□□□□ 0.7
COL1A1-211ENST00000507689 SULF1Q8IWU6 871 aa19.43■□□□□ 0.7
COL1A1-211ENST00000507689 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
COL1A1-211ENST00000507689 KLRG1Q96E93 195 aa19.43■□□□□ 0.7
COL1A1-211ENST00000507689 RCAN3Q9UKA8 241 aa19.43■□□□□ 0.7
COL1A1-211ENST00000507689 ADAMTSL1Q8N6G6 1762 aa19.42■□□□□ 0.7
COL1A1-211ENST00000507689 GYG1P46976 350 aa19.42■□□□□ 0.7
COL1A1-211ENST00000507689 HIRAP54198 1017 aaPredicted RBP19.42■□□□□ 0.7
COL1A1-211ENST00000507689 KRT26Q7Z3Y9 468 aa19.42■□□□□ 0.7
COL1A1-211ENST00000507689 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
COL1A1-211ENST00000507689 SASH1O94885 1247 aa19.41■□□□□ 0.7
COL1A1-211ENST00000507689 RFX5P48382 616 aaPredicted RBP19.41■□□□□ 0.7
COL1A1-211ENST00000507689 KIAA0825Q8IV33 1275 aa19.41■□□□□ 0.7
COL1A1-211ENST00000507689 LPIN2Q92539 896 aa19.41■□□□□ 0.7
COL1A1-211ENST00000507689 GMLQ99445 158 aa19.41■□□□□ 0.7
COL1A1-211ENST00000507689 CHMP4BQ9H444 224 aaKnown RBP19.41■□□□□ 0.7
COL1A1-211ENST00000507689 ZNF408Q9H9D4 720 aa19.41■□□□□ 0.7
COL1A1-211ENST00000507689 TNNQ9UQP3 1299 aa19.41■□□□□ 0.7
COL1A1-211ENST00000507689 SCN9AQ15858 1988 aa19.41■□□□□ 0.7
COL1A1-211ENST00000507689 FKBP1AP62942 108 aaKnown RBP19.4■□□□□ 0.7
COL1A1-211ENST00000507689 SCARF1Q14162 830 aa19.4■□□□□ 0.7
COL1A1-211ENST00000507689 USP48Q86UV5 1035 aa19.4■□□□□ 0.7
COL1A1-211ENST00000507689 MXD3Q9BW11 206 aa19.4■□□□□ 0.7
COL1A1-211ENST00000507689 GLIS2Q9BZE0 524 aaPredicted RBP19.4■□□□□ 0.7
COL1A1-211ENST00000507689 COPRSQ9NQ92 184 aa19.4■□□□□ 0.7
COL1A1-211ENST00000507689 GNL3LQ9NVN8 582 aaKnown RBP19.4■□□□□ 0.7
COL1A1-211ENST00000507689 MYO1BO43795 1136 aa19.39■□□□□ 0.69
COL1A1-211ENST00000507689 G3BP1Q13283 466 aaKnown RBP eCLIP19.39■□□□□ 0.69
COL1A1-211ENST00000507689 MTX1Q13505 466 aa19.39■□□□□ 0.69
COL1A1-211ENST00000507689 PAXIP1Q6ZW49 1069 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-211ENST00000507689 FAM84BQ96KN1 310 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-211ENST00000507689 GGA3Q9NZ52 723 aa19.39■□□□□ 0.69
COL1A1-211ENST00000507689 AKAP2Q9Y2D5 859 aa19.39■□□□□ 0.69
COL1A1-211ENST00000507689 TRAF5O00463 557 aa19.38■□□□□ 0.69
COL1A1-211ENST00000507689 CELF2O95319 508 aaKnown RBP19.38■□□□□ 0.69
COL1A1-211ENST00000507689 PSME4Q14997 1843 aa19.38■□□□□ 0.69
COL1A1-211ENST00000507689 DLGAP5Q15398 846 aa19.38■□□□□ 0.69
COL1A1-211ENST00000507689 ATP2B3Q16720 1220 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms