RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 SNAP23O00161 211 aa22.59■■□□□ 1.21
SSBP2-208ENST00000507655 RFX5P48382 616 aaPredicted RBP22.59■■□□□ 1.21
SSBP2-208ENST00000507655 APLP1P51693 650 aa22.59■■□□□ 1.21
SSBP2-208ENST00000507655 LRRFIP2Q9Y608 721 aaKnown RBP22.59■■□□□ 1.21
SSBP2-208ENST00000507655 MYH13Q9UKX3 1938 aa22.59■■□□□ 1.21
SSBP2-208ENST00000507655 GNAI3P08754 354 aa22.58■■□□□ 1.21
SSBP2-208ENST00000507655 CNOT7Q9UIV1 285 aaKnown RBP22.58■■□□□ 1.21
SSBP2-208ENST00000507655 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
SSBP2-208ENST00000507655 LRRC24Q50LG9 513 aa22.57■■□□□ 1.2
SSBP2-208ENST00000507655 TMEM57Q8N5G2 664 aa22.57■■□□□ 1.2
SSBP2-208ENST00000507655 KLHDC4Q8TBB5 520 aa22.57■■□□□ 1.2
SSBP2-208ENST00000507655 CLEC11AQ9Y240 323 aa22.57■■□□□ 1.2
SSBP2-208ENST00000507655 SHTN1A0MZ66 631 aa22.56■■□□□ 1.2
SSBP2-208ENST00000507655 USP17L3A6NCW0 530 aa22.56■■□□□ 1.2
SSBP2-208ENST00000507655 USP17L4A6NCW7 530 aa22.56■■□□□ 1.2
SSBP2-208ENST00000507655 PLIN1O60240 522 aa22.56■■□□□ 1.2
SSBP2-208ENST00000507655 PTPN12Q05209 780 aaKnown RBP22.56■■□□□ 1.2
SSBP2-208ENST00000507655 UBE4AQ14139 1066 aa22.56■■□□□ 1.2
SSBP2-208ENST00000507655 RSBN1LQ6PCB5 846 aaPredicted RBP22.56■■□□□ 1.2
SSBP2-208ENST00000507655 USP17L1Q7RTZ2 530 aa22.56■■□□□ 1.2
SSBP2-208ENST00000507655 MICALL2Q8IY33 904 aa22.56■■□□□ 1.2
SSBP2-208ENST00000507655 H7C1D1 291 aa22.55■■□□□ 1.2
SSBP2-208ENST00000507655 ITGBL1O95965 494 aaPredicted RBP22.55■■□□□ 1.2
SSBP2-208ENST00000507655 AGBL3Q8NEM8 1001 aa22.55■■□□□ 1.2
SSBP2-208ENST00000507655 PASKQ96RG2 1323 aa22.55■■□□□ 1.2
SSBP2-208ENST00000507655 ARAP2Q8WZ64 1704 aa22.54■■□□□ 1.2
SSBP2-208ENST00000507655 DZIP1LQ8IYY4 767 aaKnown RBP22.54■■□□□ 1.2
SSBP2-208ENST00000507655 VGLL2Q8N8G2 317 aa22.54■■□□□ 1.2
SSBP2-208ENST00000507655 GMLQ99445 158 aa22.54■■□□□ 1.2
SSBP2-208ENST00000507655 CD209Q9NNX6 404 aa22.54■■□□□ 1.2
SSBP2-208ENST00000507655 EYA2O00167 538 aa22.53■■□□□ 1.2
SSBP2-208ENST00000507655 HIRAP54198 1017 aaPredicted RBP22.53■■□□□ 1.2
SSBP2-208ENST00000507655 STRIP1Q5VSL9 837 aa22.53■■□□□ 1.2
SSBP2-208ENST00000507655 MAP1SQ66K74 1059 aaPredicted RBP22.53■■□□□ 1.2
SSBP2-208ENST00000507655 CNTROBQ8N137 903 aa22.53■■□□□ 1.2
SSBP2-208ENST00000507655 TRPM4Q8TD43 1214 aa22.53■■□□□ 1.2
SSBP2-208ENST00000507655 PGAP2Q9UHJ9 254 aa22.53■■□□□ 1.2
SSBP2-208ENST00000507655 FBXO3Q9UK99 471 aa22.53■■□□□ 1.2
SSBP2-208ENST00000507655 RLBP1P12271 317 aa22.52■■□□□ 1.2
SSBP2-208ENST00000507655 MTX1Q13505 466 aa22.52■■□□□ 1.2
SSBP2-208ENST00000507655 METTL24Q5JXM2 366 aa22.52■■□□□ 1.2
SSBP2-208ENST00000507655 DACT2Q5SW24 774 aa22.52■■□□□ 1.2
SSBP2-208ENST00000507655 ZNF804AQ7Z570 1209 aa22.52■■□□□ 1.2
SSBP2-208ENST00000507655 FTSJ3Q8IY81 847 aaKnown RBP22.52■■□□□ 1.2
SSBP2-208ENST00000507655 ECM29Q5VYK3 1845 aa22.52■■□□□ 1.2
SSBP2-208ENST00000507655 PDE8BO95263 885 aa22.51■■□□□ 1.19
SSBP2-208ENST00000507655 IL1R1P14778 569 aa22.51■■□□□ 1.19
SSBP2-208ENST00000507655 ATG9AQ7Z3C6 839 aa22.51■■□□□ 1.19
SSBP2-208ENST00000507655 SAMD7Q7Z3H4 446 aa22.51■■□□□ 1.19
SSBP2-208ENST00000507655 ZC3H15Q8WU90 426 aaKnown RBP22.51■■□□□ 1.19
SSBP2-208ENST00000507655 GNAI2P04899 355 aa22.5■■□□□ 1.19
SSBP2-208ENST00000507655 ZNF280AP59817 542 aaPredicted RBP22.5■■□□□ 1.19
SSBP2-208ENST00000507655 TTLL5Q6EMB2 1281 aa22.5■■□□□ 1.19
SSBP2-208ENST00000507655 COPRSQ9NQ92 184 aa22.5■■□□□ 1.19
SSBP2-208ENST00000507655 MYO3BQ8WXR4 1341 aa22.5■■□□□ 1.19
SSBP2-208ENST00000507655 CIAO1O76071 339 aa22.49■■□□□ 1.19
SSBP2-208ENST00000507655 EGFRP00533 1210 aa22.49■■□□□ 1.19
SSBP2-208ENST00000507655 RCAN3Q9UKA8 241 aa22.49■■□□□ 1.19
SSBP2-208ENST00000507655 GTF2IP78347 998 aa22.48■■□□□ 1.19
SSBP2-208ENST00000507655 HTRA3P83110 453 aa22.48■■□□□ 1.19
SSBP2-208ENST00000507655 TBC1D10BQ4KMP7 808 aaPredicted RBP22.48■■□□□ 1.19
SSBP2-208ENST00000507655 DNAJC5GQ8N7S2 189 aa22.48■■□□□ 1.19
SSBP2-208ENST00000507655 FAM84BQ96KN1 310 aaPredicted RBP22.48■■□□□ 1.19
SSBP2-208ENST00000507655 MXD3Q9BW11 206 aa22.48■■□□□ 1.19
SSBP2-208ENST00000507655 USP17L8P0C7I0 530 aa22.47■■□□□ 1.19
SSBP2-208ENST00000507655 FGFR2P21802 821 aa22.47■■□□□ 1.19
SSBP2-208ENST00000507655 ITPRIPQ8IWB1 547 aa22.47■■□□□ 1.19
SSBP2-208ENST00000507655 FBXW7Q969H0 707 aa22.47■■□□□ 1.19
SSBP2-208ENST00000507655 SIL1Q9H173 461 aa22.47■■□□□ 1.19
SSBP2-208ENST00000507655 PA2G4Q9UQ80 394 aaKnown RBP22.47■■□□□ 1.19
SSBP2-208ENST00000507655 ZBTB7BO15156 539 aaPredicted RBP22.46■■□□□ 1.19
SSBP2-208ENST00000507655 SRGAP3O43295 1099 aa22.46■■□□□ 1.19
SSBP2-208ENST00000507655 HIBADHP31937 336 aaKnown RBP22.46■■□□□ 1.19
SSBP2-208ENST00000507655 GYG1P46976 350 aa22.46■■□□□ 1.19
SSBP2-208ENST00000507655 PUM3Q15397 648 aaKnown RBP22.46■■□□□ 1.19
SSBP2-208ENST00000507655 KIF4BQ2VIQ3 1234 aa22.46■■□□□ 1.19
SSBP2-208ENST00000507655 TDRD7Q8NHU6 1098 aaKnown RBP22.46■■□□□ 1.19
SSBP2-208ENST00000507655 MS4A1P11836 297 aa22.45■■□□□ 1.18
SSBP2-208ENST00000507655 IL15P40933 162 aaPredicted RBP22.45■■□□□ 1.18
SSBP2-208ENST00000507655 MMP14P50281 582 aa22.45■■□□□ 1.18
SSBP2-208ENST00000507655 RBM26Q5T8P6 1007 aaKnown RBP22.45■■□□□ 1.18
SSBP2-208ENST00000507655 FBXO33Q7Z6M2 555 aa22.45■■□□□ 1.18
SSBP2-208ENST00000507655 PANK1Q8TE04 598 aa22.45■■□□□ 1.18
SSBP2-208ENST00000507655 CREBZFQ9NS37 354 aa22.45■■□□□ 1.18
SSBP2-208ENST00000507655 SASH1O94885 1247 aa22.44■■□□□ 1.18
SSBP2-208ENST00000507655 FKBP1AP62942 108 aaKnown RBP22.44■■□□□ 1.18
SSBP2-208ENST00000507655 MYOZ2Q9NPC6 264 aa22.44■■□□□ 1.18
SSBP2-208ENST00000507655 FAM205AQ6ZU69 1335 aa22.43■■□□□ 1.18
SSBP2-208ENST00000507655 PNMA6EA0A0J9YXQ4 647 aa22.43■■□□□ 1.18
SSBP2-208ENST00000507655 CERS5Q8N5B7 392 aa22.43■■□□□ 1.18
SSBP2-208ENST00000507655 LPIN2Q92539 896 aa22.43■■□□□ 1.18
SSBP2-208ENST00000507655 TMEM88BA6NKF7 163 aa22.42■■□□□ 1.18
SSBP2-208ENST00000507655 IFIT1P09914 478 aaKnown RBP22.42■■□□□ 1.18
SSBP2-208ENST00000507655 CAVIN4Q5BKX8 364 aa22.42■■□□□ 1.18
SSBP2-208ENST00000507655 GLIS2Q9BZE0 524 aaPredicted RBP22.42■■□□□ 1.18
SSBP2-208ENST00000507655 CEP126Q9P2H0 1117 aa22.42■■□□□ 1.18
SSBP2-208ENST00000507655 TRAF5O00463 557 aa22.41■■□□□ 1.18
SSBP2-208ENST00000507655 SLC5A1P13866 664 aa22.41■■□□□ 1.18
SSBP2-208ENST00000507655 FMR1Q06787 632 aaKnown RBP eCLIP22.41■■□□□ 1.181e-6■■□□□ 13.4
SSBP2-208ENST00000507655 CDC37L1Q7L3B6 337 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms