RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 NXPE4Q6UWF7 544 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 FCHSD1Q86WN1 690 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 CEP120Q8N960 986 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 FRMD6Q96NE9 622 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 HHIPQ96QV1 700 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 TCF12Q99081 682 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 ZKSCAN3Q9BRR0 538 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 BCO2Q9BYV7 579 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 SUV39H2Q9H5I1 410 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 MRS2Q9HD23 443 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 NLRP2Q9NX02 1062 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 DNAJB12Q9NXW2 375 aaKnown RBP5.78□□□□□ -1.48
LSM6-205ENST00000507449 VTI1BQ9UEU0 232 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 PRR12Q9ULL5 1215 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 SPG7Q9UQ90 795 aa5.78□□□□□ -1.48
LSM6-205ENST00000507449 J3QW42 95 aa5.77□□□□□ -1.49
LSM6-205ENST00000507449 EDN3P14138 238 aa5.77□□□□□ -1.49
LSM6-205ENST00000507449 HFE2Q6ZVN8 426 aa5.77□□□□□ -1.49
LSM6-205ENST00000507449 TNFRSF25Q93038 417 aa5.77□□□□□ -1.49
LSM6-205ENST00000507449 MBIPQ9NS73 344 aa5.77□□□□□ -1.49
LSM6-205ENST00000507449 NAGPAQ9UK23 515 aa5.77□□□□□ -1.49
LSM6-205ENST00000507449 LOC102724428A0A0B4J2F2 783 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 PIK3R2O00459 728 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 GADD45BO75293 160 aaPredicted RBP5.76□□□□□ -1.49
LSM6-205ENST00000507449 ARAFP10398 606 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 BCRP11274 1271 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 TCF3P15923 654 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 EIF4BP23588 611 aaKnown RBP5.76□□□□□ -1.49
LSM6-205ENST00000507449 SIK1P57059 783 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 ATP11AP98196 1134 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 PRPF40BQ6NWY9 871 aaKnown RBP5.76□□□□□ -1.49
LSM6-205ENST00000507449 ADAMTSL4Q6UY14 1074 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 NCAPG2Q86XI2 1143 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 C3orf58Q8NDZ4 430 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 CRELD1Q96HD1 420 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 OSMRQ99650 979 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 UBE2OQ9C0C9 1292 aaKnown RBP5.76□□□□□ -1.49
LSM6-205ENST00000507449 IGFLR1Q9H665 355 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 ABCB6Q9NP58 842 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 AVENQ9NQS1 362 aaPredicted RBP5.76□□□□□ -1.49
LSM6-205ENST00000507449 LRRC4BQ9NT99 713 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 DZANK1Q9NVP4 752 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 SLC6A14Q9UN76 642 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 IGF1RP08069 1367 aa5.76□□□□□ -1.49
LSM6-205ENST00000507449 ADARB2-AS1A8MUL3 147 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 METTL12A8MUP2 240 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 GIPC1O14908 333 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 USP17L7P0C7H9 530 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 HDLBPQ00341 1268 aaKnown RBP5.75□□□□□ -1.49
LSM6-205ENST00000507449 FANCCQ00597 558 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 TBC1D8BQ0IIM8 1120 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 NEUROD1Q13562 356 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 MEI1Q5TIA1 1274 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 CCNJLQ8IV13 435 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 TMEM87AQ8NBN3 555 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 EHD4Q9H223 541 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 RASSF4Q9H2L5 321 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 FAM8A1Q9UBU6 413 aa5.75□□□□□ -1.49
LSM6-205ENST00000507449 NEURL1BA8MQ27 555 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 ADH6P28332 368 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 ADH7P40394 386 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 MAP2K3P46734 347 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 GRIA4P48058 902 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 C1orf229Q6ZS94 237 aaPredicted RBP5.74□□□□□ -1.49
LSM6-205ENST00000507449 METTL16Q86W50 562 aaKnown RBP5.74□□□□□ -1.49
LSM6-205ENST00000507449 SRCIN1Q9C0H9 1055 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
LSM6-205ENST00000507449 LIN7BQ9HAP6 207 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 GGA1Q9UJY5 639 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 MKL2Q9ULH7 1088 aa5.74□□□□□ -1.49
LSM6-205ENST00000507449 TMEM238LA0A1B0GVL6 79 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 SCAMP3O14828 347 aaKnown RBP5.73□□□□□ -1.49
LSM6-205ENST00000507449 CPB1P15086 417 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 EIF2AK2P19525 551 aaKnown RBP5.73□□□□□ -1.49
LSM6-205ENST00000507449 PERM1Q5SV97 790 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 C9orf131Q5VYM1 1079 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 FAM35AQ86V20 835 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 TMEM102Q8N9M5 508 aaPredicted RBP5.73□□□□□ -1.49
LSM6-205ENST00000507449 NXPE3Q969Y0 559 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 ACDQ96AP0 544 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 POP1Q99575 1024 aaKnown RBP5.73□□□□□ -1.49
LSM6-205ENST00000507449 PBX4Q9BYU1 374 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 NSFL1CQ9UNZ2 370 aaKnown RBP5.73□□□□□ -1.49
LSM6-205ENST00000507449 STARD13Q9Y3M8 1113 aa5.73□□□□□ -1.49
LSM6-205ENST00000507449 USP31Q70CQ4 1352 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 FCGRTP55899 365 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 SPRED3Q2MJR0 410 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 SLCO4C1Q6ZQN7 724 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 PLD4Q96BZ4 506 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 LPIN3Q9BQK8 851 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 OXCT2Q9BYC2 517 aaPredicted RBP5.72□□□□□ -1.49
LSM6-205ENST00000507449 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 BCL11AQ9H165 835 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 SEMA6BQ9H3T3 888 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 ZFP64Q9NPA5 681 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 TRAK1Q9UPV9 953 aa5.72□□□□□ -1.49
LSM6-205ENST00000507449 ELOA3CA0A087WX78 387 aaPredicted RBP5.71□□□□□ -1.5
LSM6-205ENST00000507449 KRBA1A5PL33 1030 aa5.71□□□□□ -1.5
LSM6-205ENST00000507449 ELOA3DA6NLF2 546 aaPredicted RBP5.71□□□□□ -1.5
LSM6-205ENST00000507449 PDE2AO00408 941 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms