RNA–Protein interactions for RNA: ENST00000507436.1

AP3S1-205, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-205ENST00000507436 METTL22Q9BUU2 404 aaPredicted RBP4.91□□□□□ -1.62
AP3S1-205ENST00000507436 C2orf49Q9BVC5 232 aaPredicted RBP4.91□□□□□ -1.62
AP3S1-205ENST00000507436 FAM196BA6NMK8 535 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L15C9J2P7 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L10C9JJH3 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L13C9JLJ4 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L12C9JPN9 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L11C9JVI0 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L21D6R901 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L18D6R9N7 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L22D6RA61 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L17D6RBQ6 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L19D6RCP7 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L20D6RJB6 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 MAP4P27816 1152 aaKnown RBP4.9□□□□□ -1.63
AP3S1-205ENST00000507436 CFPP27918 469 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 RXRBP28702 533 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 PREPP48147 710 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 USP17L24Q0WX57 530 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 PTK7Q13308 1070 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 PLCL1Q15111 1095 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 CRTC2Q53ET0 693 aaPredicted RBP4.9□□□□□ -1.63
AP3S1-205ENST00000507436 ANKRD34AQ69YU3 496 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 TXNDC11Q6PKC3 985 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 ANKMY2Q8IV38 441 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 TMEM40Q8WWA1 233 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 CSRNP1Q96S65 589 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 TLR7Q9NYK1 1049 aaKnown RBP4.9□□□□□ -1.63
AP3S1-205ENST00000507436 LMCD1Q9NZU5 365 aa4.9□□□□□ -1.63
AP3S1-205ENST00000507436 DMGDHQ9UI17 866 aaKnown RBP4.9□□□□□ -1.63
AP3S1-205ENST00000507436 C21orf2O43822 256 aa4.89□□□□□ -1.63
AP3S1-205ENST00000507436 RFX1P22670 979 aa4.89□□□□□ -1.63
AP3S1-205ENST00000507436 RAP1GAPP47736 663 aa4.89□□□□□ -1.63
AP3S1-205ENST00000507436 LCNL1Q6ZST4 164 aa4.89□□□□□ -1.63
AP3S1-205ENST00000507436 BHLHE22Q8NFJ8 381 aaPredicted RBP4.89□□□□□ -1.63
AP3S1-205ENST00000507436 NSUN5Q96P11 429 aaKnown RBP4.89□□□□□ -1.63
AP3S1-205ENST00000507436 PSAPP07602 524 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 ZSCAN22P10073 491 aaPredicted RBP4.88□□□□□ -1.63
AP3S1-205ENST00000507436 IGFBP4P22692 258 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 CDC25BP30305 580 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 INPP5BP32019 993 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 ARSDP51689 593 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 ZNF792Q3KQV3 632 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 FDX2Q6P4F2 183 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 TTLL10Q6ZVT0 673 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 SIAH1Q8IUQ4 282 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 LRRC56Q8IYG6 542 aaPredicted RBP4.88□□□□□ -1.63
AP3S1-205ENST00000507436 FAM200AQ8TCP9 573 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 UBASH3BQ8TF42 649 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 CARD10Q9BWT7 1032 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 RAPGEFL1Q9UHV5 662 aa4.88□□□□□ -1.63
AP3S1-205ENST00000507436 IDH3AP50213 366 aa4.87□□□□□ -1.63
AP3S1-205ENST00000507436 CDCA8Q53HL2 280 aa4.87□□□□□ -1.63
AP3S1-205ENST00000507436 CFAP70Q5T0N1 1121 aa4.87□□□□□ -1.63
AP3S1-205ENST00000507436 FAM117BQ6P1L5 589 aa4.87□□□□□ -1.63
AP3S1-205ENST00000507436 ATG4DQ86TL0 474 aaPredicted RBP4.87□□□□□ -1.63
AP3S1-205ENST00000507436 KLHL23Q8NBE8 558 aa4.87□□□□□ -1.63
AP3S1-205ENST00000507436 VTI1AQ96AJ9 217 aa4.87□□□□□ -1.63
AP3S1-205ENST00000507436 DDX3YO15523 660 aaKnown RBP4.86□□□□□ -1.63
AP3S1-205ENST00000507436 LGR5O75473 907 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 MESP2Q0VG99 397 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 ECM1Q16610 540 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 SGO2Q562F6 1265 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 CILP2Q8IUL8 1156 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 LACRTQ9GZZ8 138 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 ZMYND15Q9H091 742 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 RNF208Q9H0X6 261 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.86□□□□□ -1.634e-6■■■■■ 72.1
AP3S1-205ENST00000507436 BCS1LQ9Y276 419 aa4.86□□□□□ -1.63
AP3S1-205ENST00000507436 LRRC10BA6NIK2 292 aa4.85□□□□□ -1.63
AP3S1-205ENST00000507436 FSCN2O14926 492 aa4.85□□□□□ -1.63
AP3S1-205ENST00000507436 EGFRP00533 1210 aa4.85□□□□□ -1.63
AP3S1-205ENST00000507436 NFKBIBQ15653 356 aa4.85□□□□□ -1.63
AP3S1-205ENST00000507436 C1QL4Q86Z23 238 aa4.85□□□□□ -1.63
AP3S1-205ENST00000507436 FOXD4L4Q8WXT5 416 aaPredicted RBP4.85□□□□□ -1.63
AP3S1-205ENST00000507436 ARXQ96QS3 562 aa4.85□□□□□ -1.63
AP3S1-205ENST00000507436 SLC5A6Q9Y289 635 aa4.85□□□□□ -1.63
AP3S1-205ENST00000507436 FOXO3O43524 673 aa4.84□□□□□ -1.63
AP3S1-205ENST00000507436 HOXD8P13378 290 aaPredicted RBP4.84□□□□□ -1.63
AP3S1-205ENST00000507436 CDC27P30260 824 aa4.84□□□□□ -1.63
AP3S1-205ENST00000507436 SOX18P35713 384 aa4.84□□□□□ -1.63
AP3S1-205ENST00000507436 CTSWP56202 376 aa4.84□□□□□ -1.63
AP3S1-205ENST00000507436 PAOXQ6QHF9 649 aa4.84□□□□□ -1.63
AP3S1-205ENST00000507436 SHISA5Q8N114 240 aa4.84□□□□□ -1.63
AP3S1-205ENST00000507436 NOVA2Q9UNW9 492 aaKnown RBP4.84□□□□□ -1.63
AP3S1-205ENST00000507436 FAM95CA0A1B0GW59 222 aa4.83□□□□□ -1.64
AP3S1-205ENST00000507436 ADAM11O75078 769 aa4.83□□□□□ -1.64
AP3S1-205ENST00000507436 WEE1P30291 646 aa4.83□□□□□ -1.64
AP3S1-205ENST00000507436 ANKLE2Q86XL3 938 aa4.83□□□□□ -1.64
AP3S1-205ENST00000507436 CCDC97Q96F63 343 aaPredicted RBP4.83□□□□□ -1.64
AP3S1-205ENST00000507436 TBC1D32Q96NH3 1257 aa4.83□□□□□ -1.64
AP3S1-205ENST00000507436 RUSC1Q9BVN2 902 aa4.83□□□□□ -1.64
AP3S1-205ENST00000507436 RC3H2Q9HBD1 1191 aaKnown RBP4.83□□□□□ -1.64
AP3S1-205ENST00000507436 LRRC4CQ9HCJ2 640 aa4.83□□□□□ -1.64
AP3S1-205ENST00000507436 FAM177BA6PVY3 158 aa4.82□□□□□ -1.64
AP3S1-205ENST00000507436 MMP20O60882 483 aa4.82□□□□□ -1.64
AP3S1-205ENST00000507436 MICAL2O94851 1124 aa4.82□□□□□ -1.64
AP3S1-205ENST00000507436 SWI5Q1ZZU3 235 aa4.82□□□□□ -1.64
AP3S1-205ENST00000507436 ZNF574Q6ZN55 896 aaPredicted RBP4.82□□□□□ -1.64
AP3S1-205ENST00000507436 GLIS3Q8NEA6 775 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms