RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 CCDC102BQ68D86 513 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 PRPF40BQ6NWY9 871 aaKnown RBP9.34□□□□□ -0.91
SMAD1-206ENST00000507367 DPP8Q6V1X1 898 aaPredicted RBP9.34□□□□□ -0.91
SMAD1-206ENST00000507367 ZNF804AQ7Z570 1209 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 TTLL6Q8N841 843 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 RUFY2Q8WXA3 655 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 EYA3Q99504 573 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 DNAJC2Q99543 621 aaKnown RBP9.34□□□□□ -0.91
SMAD1-206ENST00000507367 FSD1Q9BTV5 496 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 BACH2Q9BYV9 841 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 DIAPH3Q9NSV4 1193 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 PPP1R1BQ9UD71 204 aaPredicted RBP9.34□□□□□ -0.91
SMAD1-206ENST00000507367 CD2APQ9Y5K6 639 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
SMAD1-206ENST00000507367 ARAP2Q8WZ64 1704 aa9.34□□□□□ -0.92
SMAD1-206ENST00000507367 C6orf229H3BNL8 230 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 ARID4AP29374 1257 aaPredicted RBP9.33□□□□□ -0.92
SMAD1-206ENST00000507367 CHRNA5P30532 468 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 HIBADHP31937 336 aaKnown RBP9.33□□□□□ -0.92
SMAD1-206ENST00000507367 FKBP4Q02790 459 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMAD1-206ENST00000507367 ZSCAN25Q6NSZ9 544 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 KLHL34Q8N239 644 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 MPNDQ8N594 471 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 SUPT20HQ8NEM7 779 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMAD1-206ENST00000507367 PAG1Q9NWQ8 432 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 PIM2Q9P1W9 311 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 RFX7Q2KHR2 1363 aa9.33□□□□□ -0.92
SMAD1-206ENST00000507367 COL11A2P13942 1736 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-206ENST00000507367 G3V3G9 751 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 GOLIM4O00461 696 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 REC8O95072 547 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 MAP4K4O95819 1239 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-206ENST00000507367 GPSM2P81274 684 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 WASHC4Q2M389 1173 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 C8orf34Q49A92 452 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 TBC1D9Q6ZT07 1266 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 RTKN2Q8IZC4 609 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 SPATA5Q8NB90 893 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 ZC3H12CQ9C0D7 883 aaKnown RBP9.32□□□□□ -0.92
SMAD1-206ENST00000507367 DENND2AQ9ULE3 1009 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 TAF1P21675 1872 aa9.32□□□□□ -0.92
SMAD1-206ENST00000507367 ZFYP08048 801 aaPredicted RBP9.31□□□□□ -0.92
SMAD1-206ENST00000507367 DPEP1P16444 411 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 PHKA1P46020 1223 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 BCAMP50895 628 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 MFAP1P55081 439 aaKnown RBP9.31□□□□□ -0.92
SMAD1-206ENST00000507367 CCDC93Q567U6 631 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 DALRD3Q5D0E6 543 aaKnown RBP9.31□□□□□ -0.92
SMAD1-206ENST00000507367 C15orf52Q6ZUT6 534 aaKnown RBP9.31□□□□□ -0.92
SMAD1-206ENST00000507367 ZGPATQ8N5A5 531 aaKnown RBP9.31□□□□□ -0.92
SMAD1-206ENST00000507367 KBTBD3Q8NAB2 608 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 TBC1D16Q8TBP0 767 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 MED23Q9ULK4 1368 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 LRRC37AA6NMS7 1700 aa9.31□□□□□ -0.92
SMAD1-206ENST00000507367 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
SMAD1-206ENST00000507367 A0A1B0GUL6 1792 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 A0A0G2JLW4 131 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 ZBTB22O15209 634 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 IGSF3O75054 1194 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 PTGER2P43116 358 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 GYG1P46976 350 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 MAP3K12Q12852 859 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 TMED8Q6PL24 325 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-206ENST00000507367 KIAA1211Q6ZU35 1233 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 FBXO33Q7Z6M2 555 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 FAM84BQ96KN1 310 aaPredicted RBP9.3□□□□□ -0.92
SMAD1-206ENST00000507367 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 AK9Q5TCS8 1911 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 RAD50Q92878 1312 aa9.3□□□□□ -0.92
SMAD1-206ENST00000507367 DLEC1Q9Y238 1755 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 COL4A1P02462 1669 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 SNAP23O00161 211 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 MCCP23508 829 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 CHMLP26374 656 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 MCAMP43121 646 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 ZAP70P43403 619 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 RASGRF1Q13972 1273 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 SPTY2D1Q68D10 685 aaPredicted RBP9.29□□□□□ -0.92
SMAD1-206ENST00000507367 WDR66Q8TBY9 1149 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 SNRKQ9NRH2 765 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 HMG20BQ9P0W2 317 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 LRP2BPQ9P2M1 347 aa9.29□□□□□ -0.92
SMAD1-206ENST00000507367 ZNF219Q9P2Y4 722 aaPredicted RBP9.29□□□□□ -0.92
SMAD1-206ENST00000507367 RNF113AO15541 343 aaKnown RBP9.28□□□□□ -0.92
SMAD1-206ENST00000507367 EPB41L2O43491 1005 aaKnown RBP9.28□□□□□ -0.92
SMAD1-206ENST00000507367 C21orf2O43822 256 aa9.28□□□□□ -0.92
SMAD1-206ENST00000507367 IDH1O75874 414 aaKnown RBP9.28□□□□□ -0.92
SMAD1-206ENST00000507367 SCARF1Q14162 830 aa9.28□□□□□ -0.92
SMAD1-206ENST00000507367 CWC27Q6UX04 472 aaKnown RBP9.28□□□□□ -0.92
SMAD1-206ENST00000507367 TBC1D22AQ8WUA7 517 aa9.28□□□□□ -0.92
SMAD1-206ENST00000507367 ESYT1Q9BSJ8 1104 aa9.28□□□□□ -0.92
SMAD1-206ENST00000507367 RTFDC1Q9BY42 306 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-206ENST00000507367 VPS33BQ9H267 617 aa9.28□□□□□ -0.92
SMAD1-206ENST00000507367 POLLQ9UGP5 575 aa9.28□□□□□ -0.92
SMAD1-206ENST00000507367 RIMBP2O15034 1052 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms