RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
NDUFS4-204ENST00000506974 CENPQQ7L2Z9 268 aaPredicted RBP12.4□□□□□ -0.42
NDUFS4-204ENST00000506974 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
NDUFS4-204ENST00000506974 CCDC24Q8N4L8 307 aa12.4□□□□□ -0.42
NDUFS4-204ENST00000506974 DCTPP1Q9H773 170 aa12.4□□□□□ -0.42
NDUFS4-204ENST00000506974 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
NDUFS4-204ENST00000506974 GRXCR2A6NFK2 248 aa12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 SLC34A2O95436 690 aa12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 TGFB2P61812 414 aa12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 ST5P78524 1137 aa12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 GREM2Q9H772 168 aa12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
NDUFS4-204ENST00000506974 LTBP1Q14766 1721 aa12.38□□□□□ -0.43
NDUFS4-204ENST00000506974 KLRG2A4D1S0 409 aaPredicted RBP12.38□□□□□ -0.43
NDUFS4-204ENST00000506974 GPR37O15354 613 aa12.38□□□□□ -0.43
NDUFS4-204ENST00000506974 CRY2Q49AN0 593 aa12.38□□□□□ -0.43
NDUFS4-204ENST00000506974 KLHDC4Q8TBB5 520 aa12.38□□□□□ -0.43
NDUFS4-204ENST00000506974 GCC1Q96CN9 775 aa12.38□□□□□ -0.43
NDUFS4-204ENST00000506974 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
NDUFS4-204ENST00000506974 SLX4Q8IY92 1834 aa12.37□□□□□ -0.43
NDUFS4-204ENST00000506974 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
NDUFS4-204ENST00000506974 ITGA6P23229 1130 aa12.37□□□□□ -0.43
NDUFS4-204ENST00000506974 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
NDUFS4-204ENST00000506974 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
NDUFS4-204ENST00000506974 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
NDUFS4-204ENST00000506974 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
NDUFS4-204ENST00000506974 NPHP1O15259 732 aa12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 EVI5O60447 810 aa12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 OSBPP22059 807 aa12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 IFIT5Q13325 482 aaKnown RBP12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 CCDC57Q2TAC2 916 aa12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 BRIP1Q9BX63 1249 aa12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 SEC31BQ9NQW1 1179 aa12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 EXOC6BQ9Y2D4 811 aa12.36□□□□□ -0.43
NDUFS4-204ENST00000506974 AK9Q5TCS8 1911 aa12.35□□□□□ -0.43
NDUFS4-204ENST00000506974 ANKRD18BA2A2Z9 1011 aa12.35□□□□□ -0.43
NDUFS4-204ENST00000506974 SURF6O75683 361 aaKnown RBP12.35□□□□□ -0.43
NDUFS4-204ENST00000506974 NUCB1Q02818 461 aa12.35□□□□□ -0.43
NDUFS4-204ENST00000506974 GPR162Q16538 588 aa12.35□□□□□ -0.43
NDUFS4-204ENST00000506974 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
NDUFS4-204ENST00000506974 PDZRN3Q9UPQ7 1066 aa12.35□□□□□ -0.43
NDUFS4-204ENST00000506974 MYH13Q9UKX3 1938 aa12.35□□□□□ -0.43
NDUFS4-204ENST00000506974 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
NDUFS4-204ENST00000506974 CIAO1O76071 339 aa12.34□□□□□ -0.43
NDUFS4-204ENST00000506974 SASH1O94885 1247 aa12.34□□□□□ -0.43
NDUFS4-204ENST00000506974 HOXA10P31260 410 aaPredicted RBP12.34□□□□□ -0.43
NDUFS4-204ENST00000506974 HSP90AB4PQ58FF6 505 aa12.34□□□□□ -0.43
NDUFS4-204ENST00000506974 NLGN2Q8NFZ4 835 aa12.34□□□□□ -0.43
NDUFS4-204ENST00000506974 SIL1Q9H173 461 aa12.34□□□□□ -0.43
NDUFS4-204ENST00000506974 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
NDUFS4-204ENST00000506974 EYA2O00167 538 aa12.33□□□□□ -0.44
NDUFS4-204ENST00000506974 LRRC24Q50LG9 513 aa12.33□□□□□ -0.44
NDUFS4-204ENST00000506974 CELF1Q92879 486 aaKnown RBP12.33□□□□□ -0.44
NDUFS4-204ENST00000506974 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
NDUFS4-204ENST00000506974 RIPOR2Q9Y4F9 1068 aa12.33□□□□□ -0.44
NDUFS4-204ENST00000506974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.33□□□□□ -0.44
NDUFS4-204ENST00000506974 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.44
NDUFS4-204ENST00000506974 TRIM66O15016 1216 aa12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 SRGNP10124 158 aa12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 PDE6BP35913 854 aa12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 MAP2K5Q13163 448 aa12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 G3BP1Q13283 466 aaKnown RBP eCLIP12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 HIC1Q14526 733 aa12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 RHPN1Q8TCX5 695 aa12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 CDC5LQ99459 802 aaKnown RBP12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 AKAP11Q9UKA4 1901 aa12.32□□□□□ -0.44
NDUFS4-204ENST00000506974 ZNF609O15014 1411 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 SMARCA5O60264 1052 aaPredicted RBP12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 IL15P40933 162 aaPredicted RBP12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 GRAPQ13588 217 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 CHD1LQ86WJ1 897 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 SKAP1Q86WV1 359 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 ERC1Q8IUD2 1116 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 ANKRD18AQ8IVF6 992 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 DDX12PQ92771 950 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 KIF1BPQ96EK5 621 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 LRRCC1Q9C099 1032 aa12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.31□□□□□ -0.44
NDUFS4-204ENST00000506974 FER1L6Q2WGJ9 1857 aa12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 APBB1O00213 710 aa12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 NPR1P16066 1061 aa12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 IGHMBP2P38935 993 aaKnown RBP12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 RPS8P62241 208 aaKnown RBP12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 OS9Q13438 667 aaPredicted RBP12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 C2CD5Q86YS7 1000 aa12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 VGLL2Q8N8G2 317 aa12.3□□□□□ -0.44
NDUFS4-204ENST00000506974 MASTLQ96GX5 879 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms