RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 LPIN2Q92539 896 aa15.88■□□□□ 0.13
TCOF1-210ENST00000506767 GPR108Q9NPR9 543 aa15.88■□□□□ 0.13
TCOF1-210ENST00000506767 RNF181Q9P0P0 153 aa15.88■□□□□ 0.13
TCOF1-210ENST00000506767 ATP2B3Q16720 1220 aa15.87■□□□□ 0.13
TCOF1-210ENST00000506767 LARGE2Q8N3Y3 721 aa15.87■□□□□ 0.13
TCOF1-210ENST00000506767 RHPN1Q8TCX5 695 aa15.87■□□□□ 0.13
TCOF1-210ENST00000506767 ZNF526Q8TF50 670 aaPredicted RBP15.87■□□□□ 0.13
TCOF1-210ENST00000506767 RWDD1Q9H446 243 aaPredicted RBP15.87■□□□□ 0.13
TCOF1-210ENST00000506767 AKAP2Q9Y2D5 859 aa15.87■□□□□ 0.13
TCOF1-210ENST00000506767 ARAP2Q8WZ64 1704 aa15.87■□□□□ 0.13
TCOF1-210ENST00000506767 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
TCOF1-210ENST00000506767 FZD9O00144 591 aa15.86■□□□□ 0.13
TCOF1-210ENST00000506767 IGHDP01880 384 aa15.86■□□□□ 0.13
TCOF1-210ENST00000506767 NEFLP07196 543 aa15.86■□□□□ 0.13
TCOF1-210ENST00000506767 IFIT1P09914 478 aaKnown RBP15.86■□□□□ 0.13
TCOF1-210ENST00000506767 TIMM10P62072 90 aa15.86■□□□□ 0.13
TCOF1-210ENST00000506767 KIF1BPQ96EK5 621 aa15.86■□□□□ 0.13
TCOF1-210ENST00000506767 FAM84BQ96KN1 310 aaPredicted RBP15.86■□□□□ 0.13
TCOF1-210ENST00000506767 ZNF609O15014 1411 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 A0A1B0GUL7 405 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 SLC5A1P13866 664 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 TNNI3KQ59H18 835 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 FBXO33Q7Z6M2 555 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 JDP2Q8WYK2 163 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 GCC1Q96CN9 775 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 COA1Q9GZY4 146 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 ZNRF3Q9ULT6 936 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 FPGT-TNNI3KV9GXZ4 949 aa15.85■□□□□ 0.13
TCOF1-210ENST00000506767 ZC3H4Q9UPT8 1303 aaKnown RBP15.85■□□□□ 0.13
TCOF1-210ENST00000506767 YDJCA8MPS7 323 aa15.84■□□□□ 0.13
TCOF1-210ENST00000506767 DOK7Q18PE1 504 aa15.84■□□□□ 0.13
TCOF1-210ENST00000506767 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
TCOF1-210ENST00000506767 NIM1KQ8IY84 436 aa15.84■□□□□ 0.13
TCOF1-210ENST00000506767 EAF2Q96CJ1 260 aaPredicted RBP15.84■□□□□ 0.13
TCOF1-210ENST00000506767 DBNDD1Q9H9R9 158 aa15.84■□□□□ 0.13
TCOF1-210ENST00000506767 ZBTB22O15209 634 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 ECE2O60344 883 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 IL1R1P14778 569 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 HIBADHP31937 336 aaKnown RBP15.83■□□□□ 0.12
TCOF1-210ENST00000506767 GYG1P46976 350 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 ZNF804AQ7Z570 1209 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 SMC5Q8IY18 1101 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 XAGE2Q96GT9 111 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 LRRCC1Q9C099 1032 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 CD209Q9NNX6 404 aa15.83■□□□□ 0.12
TCOF1-210ENST00000506767 PSME4Q14997 1843 aa15.82■□□□□ 0.12
TCOF1-210ENST00000506767 SCN9AQ15858 1988 aa15.82■□□□□ 0.12
TCOF1-210ENST00000506767 APBB1O00213 710 aa15.82■□□□□ 0.12
TCOF1-210ENST00000506767 ADORA1P30542 326 aa15.82■□□□□ 0.12
TCOF1-210ENST00000506767 BCAMP50895 628 aa15.82■□□□□ 0.12
TCOF1-210ENST00000506767 CAVIN4Q5BKX8 364 aa15.82■□□□□ 0.12
TCOF1-210ENST00000506767 TDRD7Q8NHU6 1098 aaKnown RBP15.82■□□□□ 0.12
TCOF1-210ENST00000506767 IL1RAPL2Q9NP60 686 aa15.82■□□□□ 0.12
TCOF1-210ENST00000506767 ZNF646O15015 1829 aaPredicted RBP15.82■□□□□ 0.12
TCOF1-210ENST00000506767 G3V3G9 751 aa15.81■□□□□ 0.12
TCOF1-210ENST00000506767 DCAF8Q5TAQ9 597 aa15.81■□□□□ 0.12
TCOF1-210ENST00000506767 CLASRPQ8N2M8 674 aaKnown RBP15.81■□□□□ 0.12
TCOF1-210ENST00000506767 NEUROD6Q96NK8 337 aa15.81■□□□□ 0.12
TCOF1-210ENST00000506767 GPBP1L1Q9HC44 474 aaPredicted RBP15.81■□□□□ 0.12
TCOF1-210ENST00000506767 KCNQ5Q9NR82 932 aa15.81■□□□□ 0.12
TCOF1-210ENST00000506767 ZNF541Q9H0D2 1346 aa15.8■□□□□ 0.12
TCOF1-210ENST00000506767 SMARCA5O60264 1052 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-210ENST00000506767 CXCL9Q07325 125 aa15.8■□□□□ 0.12
TCOF1-210ENST00000506767 CCDC102BQ68D86 513 aa15.8■□□□□ 0.12
TCOF1-210ENST00000506767 DBNDD2Q9BQY9 259 aa15.8■□□□□ 0.12
TCOF1-210ENST00000506767 CCDC8Q9H0W5 538 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-210ENST00000506767 DBNLQ9UJU6 430 aaKnown RBP15.8■□□□□ 0.12
TCOF1-210ENST00000506767 PHKA1P46020 1223 aa15.79■□□□□ 0.12
TCOF1-210ENST00000506767 EIF6P56537 245 aaKnown RBP15.79■□□□□ 0.12
TCOF1-210ENST00000506767 AACSQ86V21 672 aa15.79■□□□□ 0.12
TCOF1-210ENST00000506767 TLR7Q9NYK1 1049 aaKnown RBP15.79■□□□□ 0.12
TCOF1-210ENST00000506767 GLTPD2A6NH11 291 aa15.78■□□□□ 0.12
TCOF1-210ENST00000506767 RAD17O75943 681 aa15.78■□□□□ 0.12
TCOF1-210ENST00000506767 VIL1P09327 827 aaKnown RBP15.78■□□□□ 0.12
TCOF1-210ENST00000506767 CIAPIN1Q6FI81 312 aa15.78■□□□□ 0.12
TCOF1-210ENST00000506767 VPS37DQ86XT2 251 aa15.78■□□□□ 0.12
TCOF1-210ENST00000506767 FAM205AQ6ZU69 1335 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 USP17L3A6NCW0 530 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 USP17L4A6NCW7 530 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 PSMD14O00487 310 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 ARID4AP29374 1257 aaPredicted RBP15.77■□□□□ 0.12
TCOF1-210ENST00000506767 TNIP1Q15025 636 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 ANKRD45Q5TZF3 282 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 STRIP1Q5VSL9 837 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 USP17L1Q7RTZ2 530 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 GPC2Q8N158 579 aa15.77■□□□□ 0.12
TCOF1-210ENST00000506767 ZNF512BQ96KM6 892 aaPredicted RBP15.77■□□□□ 0.12
TCOF1-210ENST00000506767 KDM2BQ8NHM5 1336 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 SEMA3EO15041 775 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 DDNO94850 711 aaPredicted RBP15.76■□□□□ 0.11
TCOF1-210ENST00000506767 IFIT2P09913 472 aaKnown RBP15.76■□□□□ 0.11
TCOF1-210ENST00000506767 GTF2IP78347 998 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 NUCB1Q02818 461 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 CCDC158Q5M9N0 1113 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 DACT2Q5SW24 774 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 GORABQ5T7V8 394 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 TTLL5Q6EMB2 1281 aa15.76■□□□□ 0.11
TCOF1-210ENST00000506767 GNL3LQ9NVN8 582 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms