RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 MAPK8P45983 427 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 BAG6P46379 1132 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 CCNJLQ8IV13 435 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 CACTIN-AS1Q8N1I8 211 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 HHIPQ96QV1 700 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 TCF12Q99081 682 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 POP1Q99575 1024 aaKnown RBP5.19□□□□□ -1.58
GYPB-207ENST00000506679 OSMRQ99650 979 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 ADAM19Q9H013 955 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 RRAGCQ9HB90 399 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 TRIM33Q9UPN9 1127 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 CNTNAP5Q8WYK1 1306 aa5.19□□□□□ -1.58
GYPB-207ENST00000506679 PDE2AO00408 941 aaPredicted RBP5.18□□□□□ -1.58
GYPB-207ENST00000506679 PRPF40AO75400 957 aaKnown RBP5.18□□□□□ -1.58
GYPB-207ENST00000506679 TRPA1O75762 1119 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 IRS1P35568 1242 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 EAPPQ56P03 285 aaPredicted RBP5.18□□□□□ -1.58
GYPB-207ENST00000506679 CEP135Q66GS9 1140 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 MSL1Q68DK7 614 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 ALG1LQ6GMV1 187 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 PRPF40BQ6NWY9 871 aaKnown RBP5.18□□□□□ -1.58
GYPB-207ENST00000506679 PI16Q6UXB8 463 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 BEND7Q8N7W2 519 aaPredicted RBP5.18□□□□□ -1.58
GYPB-207ENST00000506679 GLIS3Q8NEA6 775 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 EPS8L3Q8TE67 593 aaKnown RBP5.18□□□□□ -1.58
GYPB-207ENST00000506679 NXPE3Q969Y0 559 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 SCARF2Q96GP6 870 aaPredicted RBP5.18□□□□□ -1.58
GYPB-207ENST00000506679 WWC3Q9ULE0 1092 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 SOX13Q9UN79 622 aa5.18□□□□□ -1.58
GYPB-207ENST00000506679 PIK3R2O00459 728 aa5.17□□□□□ -1.58
GYPB-207ENST00000506679 LDHBP07195 334 aaKnown RBP5.17□□□□□ -1.58
GYPB-207ENST00000506679 GSK3AP49840 483 aa5.17□□□□□ -1.58
GYPB-207ENST00000506679 GRM2Q14416 872 aa5.17□□□□□ -1.58
GYPB-207ENST00000506679 PODNQ7Z5L7 613 aa5.17□□□□□ -1.58
GYPB-207ENST00000506679 SUV39H2Q9H5I1 410 aa5.17□□□□□ -1.58
GYPB-207ENST00000506679 ABCB6Q9NP58 842 aa5.17□□□□□ -1.58
GYPB-207ENST00000506679 TM4SF5O14894 197 aa5.16□□□□□ -1.58
GYPB-207ENST00000506679 ITPKAP23677 461 aa5.16□□□□□ -1.58
GYPB-207ENST00000506679 ATP2B2Q01814 1243 aa5.16□□□□□ -1.58
GYPB-207ENST00000506679 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.16□□□□□ -1.58
GYPB-207ENST00000506679 RGS22Q8NE09 1264 aa5.16□□□□□ -1.58
GYPB-207ENST00000506679 LIN7BQ9HAP6 207 aa5.16□□□□□ -1.58
GYPB-207ENST00000506679 PTPRAP18433 802 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 EPHA1P21709 976 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 COL8A1P27658 744 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 GRIA4P48058 902 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 FGD1P98174 961 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 TAGLNQ01995 201 aaKnown RBP5.15□□□□□ -1.59
GYPB-207ENST00000506679 PTPN12Q05209 780 aaKnown RBP5.15□□□□□ -1.59
GYPB-207ENST00000506679 KCNMA1Q12791 1236 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 GDF6Q6KF10 455 aaPredicted RBP5.15□□□□□ -1.59
GYPB-207ENST00000506679 VN1R5Q7Z5H4 357 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 DTWD1Q8N5C7 304 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 BSNDQ8WZ55 320 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 PLVAPQ9BX97 442 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 MUC3BQ9H195 1237 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 EHD4Q9H223 541 aa5.15□□□□□ -1.59
GYPB-207ENST00000506679 NOP53Q9NZM5 478 aaKnown RBP5.15□□□□□ -1.59
GYPB-207ENST00000506679 A0A0A0MRY4 1105 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 METTL12A8MUP2 240 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 RNF225M0QZC1 329 aaPredicted RBP5.14□□□□□ -1.59
GYPB-207ENST00000506679 GIPC1O14908 333 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 GADD45BO75293 160 aaPredicted RBP5.14□□□□□ -1.59
GYPB-207ENST00000506679 DEAF1O75398 565 aaPredicted RBP5.14□□□□□ -1.59
GYPB-207ENST00000506679 CDC27P30260 824 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 GNA15P30679 374 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 ALYREFQ86V81 257 aaKnown RBP5.14□□□□□ -1.59
GYPB-207ENST00000506679 WFDC8Q8IUA0 241 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 FMR1NBQ8N0W7 255 aaPredicted RBP5.14□□□□□ -1.59
GYPB-207ENST00000506679 IL22RA1Q8N6P7 574 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 FRMD6Q96NE9 622 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 BCO2Q9BYV7 579 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 OSBPL7Q9BZF2 842 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 SRCIN1Q9C0H9 1055 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 LACRTQ9GZZ8 138 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 SRA1Q9HD15 236 aaKnown RBP5.14□□□□□ -1.59
GYPB-207ENST00000506679 RNF19AQ9NV58 838 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 NLRP2Q9NX02 1062 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 TRAK1Q9UPV9 953 aa5.14□□□□□ -1.59
GYPB-207ENST00000506679 CCDC9Q9Y3X0 531 aaKnown RBP5.14□□□□□ -1.59
GYPB-207ENST00000506679 A0A096LPE4 126 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 TMEM238LA0A1B0GVL6 79 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 A0A1W2PPZ6 126 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 H3BRJ5 948 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 SETDB1Q15047 1291 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 SPRED3Q2MJR0 410 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 DMRTC2Q8IXT2 367 aaPredicted RBP5.13□□□□□ -1.59
GYPB-207ENST00000506679 C3orf58Q8NDZ4 430 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 ANKRD24Q8TF21 1146 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 DUSP9Q99956 384 aaKnown RBP5.13□□□□□ -1.59
GYPB-207ENST00000506679 BCL2L13Q9BXK5 485 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 ZNF576Q9H609 170 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 C12orf49Q9H741 205 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 SH2B1Q9NRF2 756 aaPredicted RBP5.13□□□□□ -1.59
GYPB-207ENST00000506679 PPME1Q9Y570 386 aa5.13□□□□□ -1.59
GYPB-207ENST00000506679 RBM47A0AV96 593 aaKnown RBP5.12□□□□□ -1.59
GYPB-207ENST00000506679 SPDYE3A6NKU9 549 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 XRCC5P13010 732 aaKnown RBP5.12□□□□□ -1.59
GYPB-207ENST00000506679 DAB2P98082 770 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 TRAPPC3LQ5T215 181 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms