RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 FKBP4Q02790 459 aaKnown RBP eCLIP8.71□□□□□ -1.02
TNPO1-204ENST00000506351 MROH5Q6ZUA9 1318 aa8.71□□□□□ -1.02
TNPO1-204ENST00000506351 CNTNAP4Q9C0A0 1308 aa8.71□□□□□ -1.02
TNPO1-204ENST00000506351 HCLS1P14317 486 aaPredicted RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 ZAP70P43403 619 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 LRRFIP1Q32MZ4 808 aaKnown RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 ZNF512BQ96KM6 892 aaPredicted RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 TCEANC2Q96MN5 208 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 BRWD3Q6RI45 1802 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 PDE8BO95263 885 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 ZFYP08048 801 aaPredicted RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 GJB2P29033 226 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 MCAMP43121 646 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 STOX1Q6ZVD7 989 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 NEK1Q96PY6 1258 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 ISY1Q9ULR0 285 aaKnown RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 NIP7Q9Y221 180 aaKnown RBP eCLIP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 ZNF652Q9Y2D9 606 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 UBR3Q6ZT12 1888 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 TNRC6CQ9HCJ0 1690 aaKnown RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 FAM177BA6PVY3 158 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 PRPF40AO75400 957 aaKnown RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 HSPD1P10809 573 aaKnown RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 FGFR2P21802 821 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 PUM3Q15397 648 aaKnown RBP8.7□□□□□ -1.02
TNPO1-204ENST00000506351 PI16Q6UXB8 463 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 OSBP2Q969R2 916 aa8.7□□□□□ -1.02
TNPO1-204ENST00000506351 TIAM2Q8IVF5 1701 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 STX6O43752 255 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 ZSCAN22P10073 491 aaPredicted RBP8.69□□□□□ -1.02
TNPO1-204ENST00000506351 SYT1P21579 422 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 ARID4AP29374 1257 aaPredicted RBP8.69□□□□□ -1.02
TNPO1-204ENST00000506351 NECAB1Q8N987 351 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 GPT2Q8TD30 523 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 MAST2Q6P0Q8 1798 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 CCDC152Q4G0S7 254 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 APPBP2Q92624 585 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 USP21Q9UK80 565 aa8.69□□□□□ -1.02
TNPO1-204ENST00000506351 HSP90B1P14625 803 aaKnown RBP8.68□□□□□ -1.02
TNPO1-204ENST00000506351 LPIN2Q92539 896 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 SEC31BQ9NQW1 1179 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 CCDC88AQ3V6T2 1871 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 A0A0G2JLW4 131 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 FOXP2O15409 715 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 F13A1P00488 732 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 UQCRFS1P1P0C7P4 283 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 PHKA1P46020 1223 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 CCDC102BQ68D86 513 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 CLEC4GQ6UXB4 293 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 Q6ZUG5 572 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 PTF1AQ7RTS3 328 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 KIAA1551Q9HCM1 1747 aa8.68□□□□□ -1.02
TNPO1-204ENST00000506351 RGL2O15211 777 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 HMGB1P09429 215 aaKnown RBP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 XRCC6P12956 609 aaKnown RBP eCLIP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 SLC5A1P13866 664 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 MRE11P49959 708 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 TTF1Q15361 905 aaPredicted RBP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 WASHC4Q2M389 1173 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 CAVIN1Q6NZI2 390 aaKnown RBP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.021e-6■■□□□ 12
TNPO1-204ENST00000506351 PIH1D3Q9NQM4 214 aaKnown RBP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 MTMR6Q9Y217 621 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 NCLP19338 710 aaKnown RBP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 ADD2P35612 726 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 KCNQ4P56696 695 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 GAS2L3Q86XJ1 694 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 TMEM87AQ8NBN3 555 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 HELBQ8NG08 1087 aaPredicted RBP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 MPHOSPH8Q99549 860 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 GRPEL1Q9HAV7 217 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 LAMB1P07942 1786 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 E7EWF7 191 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 MBD3O95983 291 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 IGHMBP2P38935 993 aaKnown RBP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 ZNF445P59923 1031 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 ZSCAN25Q6NSZ9 544 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 GTF3C6Q969F1 213 aa8.67□□□□□ -1.02
TNPO1-204ENST00000506351 PUS7LQ9H0K6 701 aaKnown RBP8.67□□□□□ -1.02
TNPO1-204ENST00000506351 CACNA1SQ13698 1873 aa8.66□□□□□ -1.02
TNPO1-204ENST00000506351 DTNBO60941 627 aa8.66□□□□□ -1.02
TNPO1-204ENST00000506351 ZSCAN23Q3MJ62 389 aa8.66□□□□□ -1.02
TNPO1-204ENST00000506351 RC3H1Q5TC82 1133 aaKnown RBP8.66□□□□□ -1.02
TNPO1-204ENST00000506351 DHX32Q7L7V1 743 aaKnown RBP8.66□□□□□ -1.02
TNPO1-204ENST00000506351 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
TNPO1-204ENST00000506351 GPAA1O43292 621 aa8.66□□□□□ -1.02
TNPO1-204ENST00000506351 STK3Q13188 491 aa8.66□□□□□ -1.02
TNPO1-204ENST00000506351 FOXD4L6Q3SYB3 417 aaPredicted RBP8.66□□□□□ -1.02
TNPO1-204ENST00000506351 ERFEQ4G0M1 354 aa8.66□□□□□ -1.02
TNPO1-204ENST00000506351 TTLL5Q6EMB2 1281 aa8.66□□□□□ -1.02
TNPO1-204ENST00000506351 FOXD4L3Q6VB84 417 aaPredicted RBP8.66□□□□□ -1.02
TNPO1-204ENST00000506351 BCL2L12Q9HB09 334 aa8.66□□□□□ -1.02
TNPO1-204ENST00000506351 RBM27Q9P2N5 1060 aaKnown RBP8.66□□□□□ -1.02
TNPO1-204ENST00000506351 EXOSC10Q01780 885 aaKnown RBP8.65□□□□□ -1.02
TNPO1-204ENST00000506351 LRRC2Q9BYS8 371 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 AGXT2Q9BYV1 514 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 PANK2Q9BZ23 570 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 GDPD2Q9HCC8 539 aa8.65□□□□□ -1.02
TNPO1-204ENST00000506351 CTNNA3Q9UI47 895 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms