RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 NEXNQ0ZGT2 675 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 CCDC30Q5VVM6 783 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 OGFOD1Q8N543 542 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 C8orf58Q8NAV2 365 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 STK31Q9BXU1 1019 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 PAPPA2Q9BXP8 1791 aa10.61□□□□□ -0.71
SNF8-204ENST00000506104 WTIPA6NIX2 430 aaPredicted RBP10.6□□□□□ -0.71
SNF8-204ENST00000506104 IGHMBP2P38935 993 aaKnown RBP10.6□□□□□ -0.71
SNF8-204ENST00000506104 CTSWP56202 376 aa10.6□□□□□ -0.71
SNF8-204ENST00000506104 TRIM28Q13263 835 aaKnown RBP10.6□□□□□ -0.71
SNF8-204ENST00000506104 NBPF9Q3BBW0 867 aa10.6□□□□□ -0.71
SNF8-204ENST00000506104 METTL22Q9BUU2 404 aaPredicted RBP10.6□□□□□ -0.71
SNF8-204ENST00000506104 IFT57Q9NWB7 429 aa10.6□□□□□ -0.71
SNF8-204ENST00000506104 ZNF280AP59817 542 aaPredicted RBP10.59□□□□□ -0.71
SNF8-204ENST00000506104 CWF19L2Q2TBE0 894 aaKnown RBP10.59□□□□□ -0.71
SNF8-204ENST00000506104 UBE3BQ7Z3V4 1068 aa10.59□□□□□ -0.71
SNF8-204ENST00000506104 PODNQ7Z5L7 613 aa10.59□□□□□ -0.71
SNF8-204ENST00000506104 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
SNF8-204ENST00000506104 MPHOSPH8Q99549 860 aa10.59□□□□□ -0.71
SNF8-204ENST00000506104 GREM2Q9H772 168 aa10.59□□□□□ -0.71
SNF8-204ENST00000506104 CHMP3Q9Y3E7 222 aa10.59□□□□□ -0.71
SNF8-204ENST00000506104 PI4KAP2A4QPH2 592 aa10.58□□□□□ -0.72
SNF8-204ENST00000506104 F8W031 263 aaPredicted RBP10.58□□□□□ -0.72
SNF8-204ENST00000506104 CCT4P50991 539 aaKnown RBP10.58□□□□□ -0.72
SNF8-204ENST00000506104 KIAA0825Q8IV33 1275 aa10.58□□□□□ -0.72
SNF8-204ENST00000506104 REM2Q8IYK8 340 aaPredicted RBP10.58□□□□□ -0.72
SNF8-204ENST00000506104 TSPYL6Q8N831 410 aa10.58□□□□□ -0.72
SNF8-204ENST00000506104 PI4KAP1Q8N8J0 262 aa10.58□□□□□ -0.72
SNF8-204ENST00000506104 HPS5Q9UPZ3 1129 aa10.58□□□□□ -0.72
SNF8-204ENST00000506104 PDE4DIPQ5VU43 2346 aa10.58□□□□□ -0.72
SNF8-204ENST00000506104 FKBP1BP68106 108 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 GTF2IP78347 998 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 TTLL5Q6EMB2 1281 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 KSR2Q6VAB6 950 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 ARMC9Q7Z3E5 817 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 TTLL11Q8NHH1 800 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 ZNF296Q8WUU4 475 aaPredicted RBP10.57□□□□□ -0.72
SNF8-204ENST00000506104 CHMP4AQ9BY43 222 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 ANGEL1Q9UNK9 670 aaKnown RBP10.57□□□□□ -0.72
SNF8-204ENST00000506104 MINPP1Q9UNW1 487 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 FZD1Q9UP38 647 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 PITPNM2Q9BZ72 1349 aa10.57□□□□□ -0.72
SNF8-204ENST00000506104 MED23Q9ULK4 1368 aa10.56□□□□□ -0.72
SNF8-204ENST00000506104 PLIN1O60240 522 aa10.56□□□□□ -0.72
SNF8-204ENST00000506104 ZNF853P0CG23 659 aa10.56□□□□□ -0.72
SNF8-204ENST00000506104 RBM5P52756 815 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNF8-204ENST00000506104 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
SNF8-204ENST00000506104 GMLQ99445 158 aa10.56□□□□□ -0.72
SNF8-204ENST00000506104 COA1Q9GZY4 146 aa10.56□□□□□ -0.72
SNF8-204ENST00000506104 BSDC1Q9NW68 430 aaPredicted RBP10.56□□□□□ -0.72
SNF8-204ENST00000506104 RNF216Q9NWF9 866 aaPredicted RBP10.56□□□□□ -0.72
SNF8-204ENST00000506104 JAG2Q9Y219 1238 aa10.56□□□□□ -0.72
SNF8-204ENST00000506104 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
SNF8-204ENST00000506104 WNT10BO00744 389 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 SLC4A2P04920 1241 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 IGKV5-2P06315 115 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 ITGA6P23229 1130 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 KLRK1P26718 216 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 PTPN12Q05209 780 aaKnown RBP10.55□□□□□ -0.72
SNF8-204ENST00000506104 SREBF2Q12772 1141 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 FKBP5Q13451 457 aaPredicted RBP10.55□□□□□ -0.72
SNF8-204ENST00000506104 DLGAP5Q15398 846 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 DACT2Q5SW24 774 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 G2E3Q7L622 706 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 APOBEC3FQ8IUX4 373 aaKnown RBP10.55□□□□□ -0.72
SNF8-204ENST00000506104 HELBQ8NG08 1087 aaPredicted RBP10.55□□□□□ -0.72
SNF8-204ENST00000506104 ANKRD2Q9GZV1 360 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 VEZTQ9HBM0 779 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 ZNF804BA4D1E1 1349 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 MYO3BQ8WXR4 1341 aa10.55□□□□□ -0.72
SNF8-204ENST00000506104 CLRN2A0PK11 232 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 NEURL1BA8MQ27 555 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 GPR25O00155 361 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 FKTNO75072 461 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 TAF5LO75529 589 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 TWISTNBQ3B726 338 aaPredicted RBP10.54□□□□□ -0.72
SNF8-204ENST00000506104 TAF7LQ5H9L4 462 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 STRIP1Q5VSL9 837 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 SLC10A4Q96EP9 437 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 PRKRIP1Q9H875 184 aaPredicted RBP10.54□□□□□ -0.72
SNF8-204ENST00000506104 LEMD3Q9Y2U8 911 aa10.54□□□□□ -0.72
SNF8-204ENST00000506104 ANKRD18BA2A2Z9 1011 aa10.53□□□□□ -0.72
SNF8-204ENST00000506104 CHRNDQ07001 517 aa10.53□□□□□ -0.72
SNF8-204ENST00000506104 PKN2Q16513 984 aaKnown RBP10.53□□□□□ -0.72
SNF8-204ENST00000506104 MYH16Q9H6N6 1097 aa10.53□□□□□ -0.72
SNF8-204ENST00000506104 TRIM17Q9Y577 477 aa10.53□□□□□ -0.72
SNF8-204ENST00000506104 ECM29Q5VYK3 1845 aa10.53□□□□□ -0.72
SNF8-204ENST00000506104 ZNF646O15015 1829 aaPredicted RBP10.52□□□□□ -0.73
SNF8-204ENST00000506104 SNAP23O00161 211 aa10.52□□□□□ -0.73
SNF8-204ENST00000506104 MYO1BO43795 1136 aa10.52□□□□□ -0.73
SNF8-204ENST00000506104 FBXO46Q6PJ61 603 aaPredicted RBP10.52□□□□□ -0.73
SNF8-204ENST00000506104 R3HDMLQ9H3Y0 253 aa10.52□□□□□ -0.73
SNF8-204ENST00000506104 H7C1W4 665 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 PPP1R12BO60237 982 aaPredicted RBP10.51□□□□□ -0.73
SNF8-204ENST00000506104 ATXN8OSP0DMR3 200 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 TM4SF4P48230 202 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 GCKRQ14397 625 aa10.51□□□□□ -0.73
SNF8-204ENST00000506104 PRPF38BQ5VTL8 546 aaKnown RBP10.51□□□□□ -0.73
SNF8-204ENST00000506104 SPRYD7Q5W111 196 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms