RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 ITGA6P23229 1130 aa13.97□□□□□ -0.17
SGCA-205ENST00000505964 OS9Q13438 667 aaPredicted RBP13.97□□□□□ -0.17
SGCA-205ENST00000505964 PNMA8AQ86V59 439 aaPredicted RBP13.97□□□□□ -0.17
SGCA-205ENST00000505964 GREM2Q9H772 168 aa13.97□□□□□ -0.17
SGCA-205ENST00000505964 A0A1B0GUL6 1792 aa13.96□□□□□ -0.17
SGCA-205ENST00000505964 FZD9O00144 591 aa13.96□□□□□ -0.17
SGCA-205ENST00000505964 EYA2O00167 538 aa13.96□□□□□ -0.17
SGCA-205ENST00000505964 IL15P40933 162 aaPredicted RBP13.96□□□□□ -0.17
SGCA-205ENST00000505964 MLLT1Q03111 559 aaPredicted RBP13.96□□□□□ -0.17
SGCA-205ENST00000505964 CYP4F22Q6NT55 531 aa13.96□□□□□ -0.17
SGCA-205ENST00000505964 CAPNS2Q96L46 248 aa13.96□□□□□ -0.17
SGCA-205ENST00000505964 APBB1O00213 710 aa13.95□□□□□ -0.18
SGCA-205ENST00000505964 SASH1O94885 1247 aa13.95□□□□□ -0.18
SGCA-205ENST00000505964 PDE4AP27815 886 aa13.95□□□□□ -0.18
SGCA-205ENST00000505964 TAF7LQ5H9L4 462 aa13.95□□□□□ -0.18
SGCA-205ENST00000505964 SLC51AQ86UW1 340 aa13.95□□□□□ -0.18
SGCA-205ENST00000505964 RTKN2Q8IZC4 609 aa13.95□□□□□ -0.18
SGCA-205ENST00000505964 GPC2Q8N158 579 aa13.95□□□□□ -0.18
SGCA-205ENST00000505964 KLHDC4Q8TBB5 520 aa13.95□□□□□ -0.18
SGCA-205ENST00000505964 KLRG2A4D1S0 409 aaPredicted RBP13.94□□□□□ -0.18
SGCA-205ENST00000505964 TRAF5O00463 557 aa13.94□□□□□ -0.18
SGCA-205ENST00000505964 ATG9AQ7Z3C6 839 aa13.94□□□□□ -0.18
SGCA-205ENST00000505964 CLASRPQ8N2M8 674 aaKnown RBP13.94□□□□□ -0.18
SGCA-205ENST00000505964 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
SGCA-205ENST00000505964 CDC5LQ99459 802 aaKnown RBP13.94□□□□□ -0.18
SGCA-205ENST00000505964 BEGAINQ9BUH8 593 aa13.94□□□□□ -0.18
SGCA-205ENST00000505964 SIL1Q9H173 461 aa13.94□□□□□ -0.18
SGCA-205ENST00000505964 GPR108Q9NPR9 543 aa13.94□□□□□ -0.18
SGCA-205ENST00000505964 SNED1Q8TER0 1413 aa13.93□□□□□ -0.18
SGCA-205ENST00000505964 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
SGCA-205ENST00000505964 AOC2O75106 756 aa13.93□□□□□ -0.18
SGCA-205ENST00000505964 EPS15P42566 896 aa13.93□□□□□ -0.18
SGCA-205ENST00000505964 RGS3P49796 1198 aa13.93□□□□□ -0.18
SGCA-205ENST00000505964 JDP2Q8WYK2 163 aa13.93□□□□□ -0.18
SGCA-205ENST00000505964 ZNF594Q96JF6 807 aaPredicted RBP13.93□□□□□ -0.18
SGCA-205ENST00000505964 GPR101Q96P66 508 aaPredicted RBP13.93□□□□□ -0.18
SGCA-205ENST00000505964 ARAP2Q8WZ64 1704 aa13.93□□□□□ -0.18
SGCA-205ENST00000505964 POLR2AP24928 1970 aaKnown RBP13.92□□□□□ -0.18
SGCA-205ENST00000505964 SALL3Q9BXA9 1300 aa13.92□□□□□ -0.18
SGCA-205ENST00000505964 AK9Q5TCS8 1911 aa13.92□□□□□ -0.18
SGCA-205ENST00000505964 LMOD1P29536 600 aaPredicted RBP13.92□□□□□ -0.18
SGCA-205ENST00000505964 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
SGCA-205ENST00000505964 EIF6P56537 245 aaKnown RBP13.92□□□□□ -0.18
SGCA-205ENST00000505964 CRY2Q49AN0 593 aa13.92□□□□□ -0.18
SGCA-205ENST00000505964 LDHAL6AQ6ZMR3 332 aa13.92□□□□□ -0.18
SGCA-205ENST00000505964 C3orf67Q6ZVT6 689 aa13.92□□□□□ -0.18
SGCA-205ENST00000505964 SKAP1Q86WV1 359 aa13.92□□□□□ -0.18
SGCA-205ENST00000505964 OSBPL3Q9H4L5 887 aa13.92□□□□□ -0.18
SGCA-205ENST00000505964 RIPOR2Q9Y4F9 1068 aa13.92□□□□□ -0.18
SGCA-205ENST00000505964 ALDH1B1P30837 517 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 SCNN1DP51172 638 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 CST9Q5W186 159 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 DDX46Q7L014 1031 aaKnown RBP13.91□□□□□ -0.18
SGCA-205ENST00000505964 ANKRD18AQ8IVF6 992 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 PLEKHM2Q8IWE5 1019 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 PUS3Q9BZE2 481 aaKnown RBP13.91□□□□□ -0.18
SGCA-205ENST00000505964 IL1RAPL2Q9NP60 686 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 SEC31BQ9NQW1 1179 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 STAP2Q9UGK3 403 aa13.91□□□□□ -0.18
SGCA-205ENST00000505964 AOX1Q06278 1338 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 HOXA10P31260 410 aaPredicted RBP13.9□□□□□ -0.18
SGCA-205ENST00000505964 ECE1P42892 770 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 TFCP2Q12800 502 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 PSMD1Q99460 953 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 CNNM1Q9NRU3 951 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 COL4A1P02462 1669 aa13.9□□□□□ -0.18
SGCA-205ENST00000505964 MX1P20591 662 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 RGS19P49795 217 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 PDE1AP54750 535 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 RPS8P62241 208 aaKnown RBP13.89□□□□□ -0.19
SGCA-205ENST00000505964 TNNI3KQ59H18 835 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 LARGE2Q8N3Y3 721 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
SGCA-205ENST00000505964 AKAP2Q9Y2D5 859 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 FPGT-TNNI3KV9GXZ4 949 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 LRRC37AA6NMS7 1700 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 ZNF609O15014 1411 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
SGCA-205ENST00000505964 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
SGCA-205ENST00000505964 GRAPQ13588 217 aa13.88□□□□□ -0.19
SGCA-205ENST00000505964 METTL24Q5JXM2 366 aa13.88□□□□□ -0.19
SGCA-205ENST00000505964 AACSQ86V21 672 aa13.88□□□□□ -0.19
SGCA-205ENST00000505964 VGLL2Q8N8G2 317 aa13.88□□□□□ -0.19
SGCA-205ENST00000505964 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
SGCA-205ENST00000505964 OTUD7AQ8TE49 926 aaPredicted RBP13.88□□□□□ -0.19
SGCA-205ENST00000505964 RPGRQ92834 1020 aaKnown RBP13.88□□□□□ -0.19
SGCA-205ENST00000505964 EAF2Q96CJ1 260 aaPredicted RBP13.88□□□□□ -0.19
SGCA-205ENST00000505964 RBM17Q96I25 401 aaKnown RBP13.88□□□□□ -0.19
SGCA-205ENST00000505964 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
SGCA-205ENST00000505964 CRAMP1Q96RY5 1269 aa13.88□□□□□ -0.19
SGCA-205ENST00000505964 MCOLN1Q9GZU1 580 aa13.88□□□□□ -0.19
SGCA-205ENST00000505964 TLL2Q9Y6L7 1015 aa13.88□□□□□ -0.19
SGCA-205ENST00000505964 PDE8BO95263 885 aa13.87□□□□□ -0.19
SGCA-205ENST00000505964 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
SGCA-205ENST00000505964 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
SGCA-205ENST00000505964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms