RNA–Protein interactions for RNA: ENST00000505937.2

PCDH1-205, Transcript of protocadherin 1, humanhuman

TSL 5

Gene PCDH1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-205ENST00000505937 KCNQ5Q9NR82 932 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 CNOT7Q9UIV1 285 aaKnown RBP19.32■□□□□ 0.68
PCDH1-205ENST00000505937 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 TNNQ9UQP3 1299 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 ZBTB12Q9Y330 459 aaPredicted RBP19.32■□□□□ 0.68
PCDH1-205ENST00000505937 RIPOR2Q9Y4F9 1068 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 POTEIP0CG38 1075 aa19.31■□□□□ 0.68
PCDH1-205ENST00000505937 POTEJP0CG39 1038 aa19.31■□□□□ 0.68
PCDH1-205ENST00000505937 ITPRIPQ8IWB1 547 aa19.31■□□□□ 0.68
PCDH1-205ENST00000505937 MICALL2Q8IY33 904 aa19.31■□□□□ 0.68
PCDH1-205ENST00000505937 FBXW7Q969H0 707 aa19.31■□□□□ 0.68
PCDH1-205ENST00000505937 EYA2O00167 538 aa19.3■□□□□ 0.68
PCDH1-205ENST00000505937 KLRK1P26718 216 aa19.3■□□□□ 0.68
PCDH1-205ENST00000505937 LRRC24Q50LG9 513 aa19.3■□□□□ 0.68
PCDH1-205ENST00000505937 RSBN1LQ6PCB5 846 aaPredicted RBP19.3■□□□□ 0.68
PCDH1-205ENST00000505937 TXNRD3Q86VQ6 643 aa19.3■□□□□ 0.68
PCDH1-205ENST00000505937 AGBL3Q8NEM8 1001 aa19.3■□□□□ 0.68
PCDH1-205ENST00000505937 KLHDC4Q8TBB5 520 aa19.3■□□□□ 0.68
PCDH1-205ENST00000505937 FBXO3Q9UK99 471 aa19.3■□□□□ 0.68
PCDH1-205ENST00000505937 SNAP23O00161 211 aa19.29■□□□□ 0.68
PCDH1-205ENST00000505937 MYO3BQ8WXR4 1341 aa19.28■□□□□ 0.68
PCDH1-205ENST00000505937 RFX5P48382 616 aaPredicted RBP19.28■□□□□ 0.68
PCDH1-205ENST00000505937 PTPN12Q05209 780 aaKnown RBP19.28■□□□□ 0.68
PCDH1-205ENST00000505937 STRIP1Q5VSL9 837 aa19.28■□□□□ 0.68
PCDH1-205ENST00000505937 CD209Q9NNX6 404 aa19.28■□□□□ 0.68
PCDH1-205ENST00000505937 SRGAP3O43295 1099 aa19.27■□□□□ 0.68
PCDH1-205ENST00000505937 CIAO1O76071 339 aa19.27■□□□□ 0.68
PCDH1-205ENST00000505937 PDE8BO95263 885 aa19.27■□□□□ 0.68
PCDH1-205ENST00000505937 TTLL5Q6EMB2 1281 aa19.27■□□□□ 0.68
PCDH1-205ENST00000505937 VPS37DQ86XT2 251 aa19.27■□□□□ 0.68
PCDH1-205ENST00000505937 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
PCDH1-205ENST00000505937 YTHDC1Q96MU7 727 aaKnown RBP19.27■□□□□ 0.68
PCDH1-205ENST00000505937 SIL1Q9H173 461 aa19.27■□□□□ 0.68
PCDH1-205ENST00000505937 IFIT1P09914 478 aaKnown RBP19.26■□□□□ 0.67
PCDH1-205ENST00000505937 MTX1Q13505 466 aa19.26■□□□□ 0.67
PCDH1-205ENST00000505937 PUM3Q15397 648 aaKnown RBP19.26■□□□□ 0.67
PCDH1-205ENST00000505937 CAVIN4Q5BKX8 364 aa19.26■□□□□ 0.67
PCDH1-205ENST00000505937 MAP1SQ66K74 1059 aaPredicted RBP19.26■□□□□ 0.67
PCDH1-205ENST00000505937 CNTROBQ8N137 903 aa19.26■□□□□ 0.67
PCDH1-205ENST00000505937 ZC3H15Q8WU90 426 aaKnown RBP19.26■□□□□ 0.67
PCDH1-205ENST00000505937 COPRSQ9NQ92 184 aa19.26■□□□□ 0.67
PCDH1-205ENST00000505937 ZNF609O15014 1411 aa19.25■□□□□ 0.67
PCDH1-205ENST00000505937 USP17L8P0C7I0 530 aa19.25■□□□□ 0.67
PCDH1-205ENST00000505937 RLBP1P12271 317 aa19.25■□□□□ 0.67
PCDH1-205ENST00000505937 HIBADHP31937 336 aaKnown RBP19.25■□□□□ 0.67
PCDH1-205ENST00000505937 IL15P40933 162 aaPredicted RBP19.25■□□□□ 0.67
PCDH1-205ENST00000505937 GTF2IP78347 998 aa19.25■□□□□ 0.67
PCDH1-205ENST00000505937 DACT2Q5SW24 774 aa19.25■□□□□ 0.67
PCDH1-205ENST00000505937 OGFOD1Q8N543 542 aa19.25■□□□□ 0.67
PCDH1-205ENST00000505937 CEP126Q9P2H0 1117 aa19.25■□□□□ 0.67
PCDH1-205ENST00000505937 IRS2Q9Y4H2 1338 aa19.25■□□□□ 0.67
PCDH1-205ENST00000505937 IL1R1P14778 569 aa19.24■□□□□ 0.67
PCDH1-205ENST00000505937 MMP14P50281 582 aa19.24■□□□□ 0.67
PCDH1-205ENST00000505937 TBC1D10BQ4KMP7 808 aaPredicted RBP19.24■□□□□ 0.67
PCDH1-205ENST00000505937 SAMD7Q7Z3H4 446 aa19.24■□□□□ 0.67
PCDH1-205ENST00000505937 VGLL2Q8N8G2 317 aa19.24■□□□□ 0.67
PCDH1-205ENST00000505937 TRPM4Q8TD43 1214 aa19.24■□□□□ 0.67
PCDH1-205ENST00000505937 PANK1Q8TE04 598 aa19.24■□□□□ 0.67
PCDH1-205ENST00000505937 SHTN1A0MZ66 631 aa19.23■□□□□ 0.67
PCDH1-205ENST00000505937 SLC5A1P13866 664 aa19.23■□□□□ 0.67
PCDH1-205ENST00000505937 ZNF280AP59817 542 aaPredicted RBP19.23■□□□□ 0.67
PCDH1-205ENST00000505937 KIF4BQ2VIQ3 1234 aa19.23■□□□□ 0.67
PCDH1-205ENST00000505937 RBM26Q5T8P6 1007 aaKnown RBP19.23■□□□□ 0.67
PCDH1-205ENST00000505937 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
PCDH1-205ENST00000505937 HDAC9Q9UKV0 1011 aa19.23■□□□□ 0.67
PCDH1-205ENST00000505937 PA2G4Q9UQ80 394 aaKnown RBP19.23■□□□□ 0.67
PCDH1-205ENST00000505937 SCN9AQ15858 1988 aa19.23■□□□□ 0.67
PCDH1-205ENST00000505937 ZBTB7BO15156 539 aaPredicted RBP19.22■□□□□ 0.67
PCDH1-205ENST00000505937 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
PCDH1-205ENST00000505937 GYG1P46976 350 aa19.22■□□□□ 0.67
PCDH1-205ENST00000505937 ATG9AQ7Z3C6 839 aa19.22■□□□□ 0.67
PCDH1-205ENST00000505937 LPIN2Q92539 896 aa19.22■□□□□ 0.67
PCDH1-205ENST00000505937 FAM84BQ96KN1 310 aaPredicted RBP19.22■□□□□ 0.67
PCDH1-205ENST00000505937 GMLQ99445 158 aa19.22■□□□□ 0.67
PCDH1-205ENST00000505937 SASH1O94885 1247 aa19.21■□□□□ 0.67
PCDH1-205ENST00000505937 ITGBL1O95965 494 aaPredicted RBP19.21■□□□□ 0.67
PCDH1-205ENST00000505937 PGAP2Q9UHJ9 254 aa19.21■□□□□ 0.67
PCDH1-205ENST00000505937 PASKQ96RG2 1323 aa19.21■□□□□ 0.67
PCDH1-205ENST00000505937 ADAMTSL1Q8N6G6 1762 aa19.2■□□□□ 0.66
PCDH1-205ENST00000505937 HIRAP54198 1017 aaPredicted RBP19.2■□□□□ 0.66
PCDH1-205ENST00000505937 G3BP1Q13283 466 aaKnown RBP eCLIP19.2■□□□□ 0.66
PCDH1-205ENST00000505937 FBXO33Q7Z6M2 555 aa19.2■□□□□ 0.66
PCDH1-205ENST00000505937 TDRD7Q8NHU6 1098 aaKnown RBP19.2■□□□□ 0.66
PCDH1-205ENST00000505937 DCPSQ96C86 337 aaKnown RBP19.2■□□□□ 0.66
PCDH1-205ENST00000505937 MXD3Q9BW11 206 aa19.2■□□□□ 0.66
PCDH1-205ENST00000505937 MYOZ2Q9NPC6 264 aa19.2■□□□□ 0.66
PCDH1-205ENST00000505937 DDX19BQ9UMR2 479 aa19.2■□□□□ 0.66
PCDH1-205ENST00000505937 FGFR2P21802 821 aa19.19■□□□□ 0.66
PCDH1-205ENST00000505937 FKBP1AP62942 108 aaKnown RBP19.19■□□□□ 0.66
PCDH1-205ENST00000505937 MVPQ14764 893 aaKnown RBP19.19■□□□□ 0.66
PCDH1-205ENST00000505937 ATP2B3Q16720 1220 aa19.19■□□□□ 0.66
PCDH1-205ENST00000505937 CDC37L1Q7L3B6 337 aa19.19■□□□□ 0.66
PCDH1-205ENST00000505937 KIAA0825Q8IV33 1275 aa19.19■□□□□ 0.66
PCDH1-205ENST00000505937 C1orf115Q9H7X2 142 aa19.19■□□□□ 0.66
PCDH1-205ENST00000505937 CREBZFQ9NS37 354 aa19.19■□□□□ 0.66
PCDH1-205ENST00000505937 A0A1B0GUL6 1792 aa19.19■□□□□ 0.66
PCDH1-205ENST00000505937 PNMA6EA0A0J9YXQ4 647 aa19.18■□□□□ 0.66
PCDH1-205ENST00000505937 TMEM88BA6NKF7 163 aa19.18■□□□□ 0.66
PCDH1-205ENST00000505937 ATP8B2P98198 1209 aa19.18■□□□□ 0.66
PCDH1-205ENST00000505937 PDE3AQ14432 1141 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms