RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 GBA2Q9HCG7 927 aaPredicted RBP31.48■■■□□ 2.63
HERC4-212ENST00000505760 FAM161AQ3B820 660 aa31.47■■■□□ 2.63
HERC4-212ENST00000505760 MPHOSPH8Q99549 860 aa31.47■■■□□ 2.63
HERC4-212ENST00000505760 BRPF1P55201 1214 aaPredicted RBP31.46■■■□□ 2.63
HERC4-212ENST00000505760 CASP7P55210 303 aa31.46■■■□□ 2.63
HERC4-212ENST00000505760 GMLQ99445 158 aa31.46■■■□□ 2.63
HERC4-212ENST00000505760 ASTN2O75129 1339 aaPredicted RBP31.46■■■□□ 2.63
HERC4-212ENST00000505760 NOGQ13253 232 aa31.45■■■□□ 2.63
HERC4-212ENST00000505760 SCARF1Q14162 830 aa31.45■■■□□ 2.63
HERC4-212ENST00000505760 FAM9BQ8IZU0 186 aa31.45■■■□□ 2.63
HERC4-212ENST00000505760 MYOZ2Q9NPC6 264 aa31.45■■■□□ 2.63
HERC4-212ENST00000505760 TSKSQ9UJT2 592 aa31.45■■■□□ 2.63
HERC4-212ENST00000505760 LEMD3Q9Y2U8 911 aa31.45■■■□□ 2.63
HERC4-212ENST00000505760 CA12O43570 354 aa31.44■■■□□ 2.62
HERC4-212ENST00000505760 ANGEL2Q5VTE6 544 aaKnown RBP31.44■■■□□ 2.62
HERC4-212ENST00000505760 ANKRD2Q9GZV1 360 aa31.44■■■□□ 2.62
HERC4-212ENST00000505760 CSF1RP07333 972 aa31.43■■■□□ 2.62
HERC4-212ENST00000505760 FBXW7Q969H0 707 aa31.43■■■□□ 2.62
HERC4-212ENST00000505760 RGMBQ6NW40 437 aa31.42■■■□□ 2.62
HERC4-212ENST00000505760 COA1Q9GZY4 146 aa31.42■■■□□ 2.62
HERC4-212ENST00000505760 SPINK5Q9NQ38 1064 aaPredicted RBP31.42■■■□□ 2.62
HERC4-212ENST00000505760 F6X3S4 739 aa31.41■■■□□ 2.62
HERC4-212ENST00000505760 CDCA5Q96FF9 252 aa31.41■■■□□ 2.62
HERC4-212ENST00000505760 ZNF804BA4D1E1 1349 aa31.41■■■□□ 2.62
HERC4-212ENST00000505760 ANKRD18BA2A2Z9 1011 aa31.39■■■□□ 2.62
HERC4-212ENST00000505760 KCNJ4P48050 445 aa31.39■■■□□ 2.62
HERC4-212ENST00000505760 DACT2Q5SW24 774 aa31.39■■■□□ 2.62
HERC4-212ENST00000505760 TXNRD3Q86VQ6 643 aa31.39■■■□□ 2.62
HERC4-212ENST00000505760 OGFOD1Q8N543 542 aa31.39■■■□□ 2.62
HERC4-212ENST00000505760 ZNF157P51786 506 aaPredicted RBP31.38■■■□□ 2.61
HERC4-212ENST00000505760 STRIP1Q5VSL9 837 aa31.38■■■□□ 2.61
HERC4-212ENST00000505760 CCDC102AQ96A19 550 aa31.38■■■□□ 2.61
HERC4-212ENST00000505760 ZIC5Q96T25 663 aa31.38■■■□□ 2.61
HERC4-212ENST00000505760 MXD3Q9BW11 206 aa31.38■■■□□ 2.61
HERC4-212ENST00000505760 CHMP3Q9Y3E7 222 aa31.38■■■□□ 2.61
HERC4-212ENST00000505760 MYO3BQ8WXR4 1341 aa31.38■■■□□ 2.61
HERC4-212ENST00000505760 CHRNDQ07001 517 aa31.37■■■□□ 2.61
HERC4-212ENST00000505760 BEND3Q5T5X7 828 aa31.37■■■□□ 2.61
HERC4-212ENST00000505760 PITPNM2Q9BZ72 1349 aa31.37■■■□□ 2.61
HERC4-212ENST00000505760 ZNF646O15015 1829 aaPredicted RBP31.37■■■□□ 2.61
HERC4-212ENST00000505760 IFIT5Q13325 482 aaKnown RBP31.36■■■□□ 2.61
HERC4-212ENST00000505760 FAM155AB1AL88 458 aaPredicted RBP31.35■■■□□ 2.61
HERC4-212ENST00000505760 KLRK1P26718 216 aa31.35■■■□□ 2.61
HERC4-212ENST00000505760 ABHD8Q96I13 439 aa31.35■■■□□ 2.61
HERC4-212ENST00000505760 FOXO4P98177 505 aa31.34■■■□□ 2.61
HERC4-212ENST00000505760 TTLL5Q6EMB2 1281 aa31.34■■■□□ 2.61
HERC4-212ENST00000505760 CASP8AP2Q9UKL3 1982 aa31.34■■■□□ 2.61
HERC4-212ENST00000505760 NBPF9Q3BBW0 867 aa31.33■■■□□ 2.61
HERC4-212ENST00000505760 SCAF8Q9UPN6 1271 aaKnown RBP31.32■■■□□ 2.6
HERC4-212ENST00000505760 GRM8O00222 908 aa31.31■■■□□ 2.6
HERC4-212ENST00000505760 C9orf78Q9NZ63 289 aaPredicted RBP31.31■■■□□ 2.6
HERC4-212ENST00000505760 TAF5LO75529 589 aa31.3■■■□□ 2.6
HERC4-212ENST00000505760 MMP14P50281 582 aa31.3■■■□□ 2.6
HERC4-212ENST00000505760 FKBP1BP68106 108 aa31.3■■■□□ 2.6
HERC4-212ENST00000505760 GTF2IP78347 998 aa31.3■■■□□ 2.6
HERC4-212ENST00000505760 KIF23Q02241 960 aaPredicted RBP31.3■■■□□ 2.6
HERC4-212ENST00000505760 SLC4A10Q6U841 1118 aa31.3■■■□□ 2.6
HERC4-212ENST00000505760 LMBR1LQ6UX01 489 aa31.3■■■□□ 2.6
HERC4-212ENST00000505760 HELBQ8NG08 1087 aaPredicted RBP31.3■■■□□ 2.6
HERC4-212ENST00000505760 PAPPA2Q9BXP8 1791 aa31.3■■■□□ 2.6
HERC4-212ENST00000505760 WNT10BO00744 389 aa31.29■■■□□ 2.6
HERC4-212ENST00000505760 HDAC9Q9UKV0 1011 aa31.29■■■□□ 2.6
HERC4-212ENST00000505760 A0A1B0GUL6 1792 aa31.29■■■□□ 2.6
HERC4-212ENST00000505760 AKAP11Q9UKA4 1901 aa31.28■■■□□ 2.6
HERC4-212ENST00000505760 SNAP23O00161 211 aa31.28■■■□□ 2.6
HERC4-212ENST00000505760 SLC10A3P09131 477 aa31.28■■■□□ 2.6
HERC4-212ENST00000505760 CCDC57Q2TAC2 916 aa31.28■■■□□ 2.6
HERC4-212ENST00000505760 TAF7LQ5H9L4 462 aa31.28■■■□□ 2.6
HERC4-212ENST00000505760 KIAA0825Q8IV33 1275 aa31.28■■■□□ 2.6
HERC4-212ENST00000505760 CD209Q9NNX6 404 aa31.28■■■□□ 2.6
HERC4-212ENST00000505760 ALDH1L1O75891 902 aa31.27■■■□□ 2.6
HERC4-212ENST00000505760 EPHA10Q5JZY3 1008 aa31.27■■■□□ 2.6
HERC4-212ENST00000505760 SASH1O94885 1247 aa31.26■■■□□ 2.59
HERC4-212ENST00000505760 SRCIN1Q9C0H9 1055 aa31.26■■■□□ 2.59
HERC4-212ENST00000505760 PRAMEF18Q5VWM3 479 aa31.25■■■□□ 2.59
HERC4-212ENST00000505760 LDHAL6AQ6ZMR3 332 aa31.25■■■□□ 2.59
HERC4-212ENST00000505760 SAGE1Q9NXZ1 904 aa31.25■■■□□ 2.59
HERC4-212ENST00000505760 C15orf52Q6ZUT6 534 aaKnown RBP31.24■■■□□ 2.59
HERC4-212ENST00000505760 ZNF804AQ7Z570 1209 aa31.24■■■□□ 2.59
HERC4-212ENST00000505760 ZNF594Q96JF6 807 aaPredicted RBP31.24■■■□□ 2.59
HERC4-212ENST00000505760 CNNM1Q9NRU3 951 aa31.24■■■□□ 2.59
HERC4-212ENST00000505760 NF2P35240 595 aa31.23■■■□□ 2.59
HERC4-212ENST00000505760 TTLL12Q14166 644 aaPredicted RBP31.23■■■□□ 2.59
HERC4-212ENST00000505760 RASAL3Q86YV0 1011 aa31.23■■■□□ 2.59
HERC4-212ENST00000505760 ZNF521Q96K83 1311 aa31.23■■■□□ 2.59
HERC4-212ENST00000505760 IRS2Q9Y4H2 1338 aa31.23■■■□□ 2.59
HERC4-212ENST00000505760 PLIN1O60240 522 aa31.22■■■□□ 2.59
HERC4-212ENST00000505760 MOB2Q70IA6 237 aa31.22■■■□□ 2.59
HERC4-212ENST00000505760 CCDC85CA6NKD9 419 aa31.21■■■□□ 2.59
HERC4-212ENST00000505760 TRPA1O75762 1119 aa31.21■■■□□ 2.59
HERC4-212ENST00000505760 APOBEC3FQ8IUX4 373 aaKnown RBP31.21■■■□□ 2.59
HERC4-212ENST00000505760 CSRNP1Q96S65 589 aa31.21■■■□□ 2.59
HERC4-212ENST00000505760 RNF186Q9NXI6 227 aa31.21■■■□□ 2.59
HERC4-212ENST00000505760 UBE2Q2LH0YL09 131 aa31.2■■■□□ 2.59
HERC4-212ENST00000505760 REM2Q8IYK8 340 aaPredicted RBP31.2■■■□□ 2.59
HERC4-212ENST00000505760 MCOLN1Q9GZU1 580 aa31.2■■■□□ 2.59
HERC4-212ENST00000505760 IL1R1P14778 569 aa31.18■■■□□ 2.58
HERC4-212ENST00000505760 DGKZQ13574 1117 aa31.18■■■□□ 2.58
HERC4-212ENST00000505760 DLGAP5Q15398 846 aa31.18■■■□□ 2.58
HERC4-212ENST00000505760 CERS5Q8N5B7 392 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms