RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 LMOD1P29536 600 aaPredicted RBP16.47■□□□□ 0.23
ITGA3-206ENST00000505612 C1QTNF8P60827 252 aa16.47■□□□□ 0.23
ITGA3-206ENST00000505612 TTC22Q5TAA0 569 aa16.47■□□□□ 0.23
ITGA3-206ENST00000505612 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
ITGA3-206ENST00000505612 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
ITGA3-206ENST00000505612 RBM46Q8TBY0 533 aaKnown RBP16.47■□□□□ 0.23
ITGA3-206ENST00000505612 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
ITGA3-206ENST00000505612 EXOC6BQ9Y2D4 811 aa16.47■□□□□ 0.23
ITGA3-206ENST00000505612 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
ITGA3-206ENST00000505612 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
ITGA3-206ENST00000505612 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
ITGA3-206ENST00000505612 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
ITGA3-206ENST00000505612 GJA3Q9Y6H8 435 aa16.46■□□□□ 0.23
ITGA3-206ENST00000505612 ZNF804BA4D1E1 1349 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 CHRNDQ07001 517 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 CXCL9Q07325 125 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 FSTL1Q12841 308 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 RHPN1Q8TCX5 695 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 HACL1Q9UJ83 578 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 LAMB2P55268 1798 aa16.45■□□□□ 0.22
ITGA3-206ENST00000505612 PDE1AP54750 535 aa16.44■□□□□ 0.22
ITGA3-206ENST00000505612 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
ITGA3-206ENST00000505612 COA1Q9GZY4 146 aa16.44■□□□□ 0.22
ITGA3-206ENST00000505612 COPRSQ9NQ92 184 aa16.44■□□□□ 0.22
ITGA3-206ENST00000505612 SBF1O95248 1867 aa16.44■□□□□ 0.22
ITGA3-206ENST00000505612 ZNF541Q9H0D2 1346 aa16.44■□□□□ 0.22
ITGA3-206ENST00000505612 MED23Q9ULK4 1368 aa16.43■□□□□ 0.22
ITGA3-206ENST00000505612 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
ITGA3-206ENST00000505612 ECE2O60344 883 aa16.43■□□□□ 0.22
ITGA3-206ENST00000505612 RPS12P25398 132 aaKnown RBP16.43■□□□□ 0.22
ITGA3-206ENST00000505612 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
ITGA3-206ENST00000505612 C15orf52Q6ZUT6 534 aaKnown RBP16.43■□□□□ 0.22
ITGA3-206ENST00000505612 SMC1BQ8NDV3 1235 aa16.43■□□□□ 0.22
ITGA3-206ENST00000505612 DPF2Q92785 391 aa16.43■□□□□ 0.22
ITGA3-206ENST00000505612 CDC45O75419 566 aa16.42■□□□□ 0.22
ITGA3-206ENST00000505612 RAD17O75943 681 aa16.42■□□□□ 0.22
ITGA3-206ENST00000505612 GSPT1P15170 499 aaKnown RBP16.42■□□□□ 0.22
ITGA3-206ENST00000505612 MX1P20591 662 aa16.42■□□□□ 0.22
ITGA3-206ENST00000505612 MMP14P50281 582 aa16.42■□□□□ 0.22
ITGA3-206ENST00000505612 DOK7Q18PE1 504 aa16.42■□□□□ 0.22
ITGA3-206ENST00000505612 SLC51AQ86UW1 340 aa16.42■□□□□ 0.22
ITGA3-206ENST00000505612 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
ITGA3-206ENST00000505612 TAF1DQ9H5J8 278 aaPredicted RBP16.42■□□□□ 0.22
ITGA3-206ENST00000505612 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
ITGA3-206ENST00000505612 RIPOR2Q9Y4F9 1068 aa16.42■□□□□ 0.22
ITGA3-206ENST00000505612 POTECB2RU33 542 aa16.41■□□□□ 0.22
ITGA3-206ENST00000505612 H7C1D1 291 aa16.4■□□□□ 0.22
ITGA3-206ENST00000505612 CIAO1O76071 339 aa16.4■□□□□ 0.22
ITGA3-206ENST00000505612 EPHX2P34913 555 aa16.4■□□□□ 0.22
ITGA3-206ENST00000505612 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
ITGA3-206ENST00000505612 G3BP1Q13283 466 aaKnown RBP eCLIP16.4■□□□□ 0.22
ITGA3-206ENST00000505612 METTL24Q5JXM2 366 aa16.4■□□□□ 0.22
ITGA3-206ENST00000505612 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
ITGA3-206ENST00000505612 ZNF804AQ7Z570 1209 aa16.4■□□□□ 0.22
ITGA3-206ENST00000505612 TBC1D32Q96NH3 1257 aa16.4■□□□□ 0.22
ITGA3-206ENST00000505612 TTC41PQ6P2S7 1318 aa16.4■□□□□ 0.22
ITGA3-206ENST00000505612 USP17L3A6NCW0 530 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 USP17L4A6NCW7 530 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 EYA2O00167 538 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 APBB1O00213 710 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 TAF5LO75529 589 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 SEC24BO95487 1268 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.21
ITGA3-206ENST00000505612 USP17L1Q7RTZ2 530 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 LDHDQ86WU2 507 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 CLASRPQ8N2M8 674 aaKnown RBP16.39■□□□□ 0.21
ITGA3-206ENST00000505612 HELBQ8NG08 1087 aaPredicted RBP16.39■□□□□ 0.21
ITGA3-206ENST00000505612 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.21
ITGA3-206ENST00000505612 ADARB2Q9NS39 739 aaKnown RBP16.39■□□□□ 0.21
ITGA3-206ENST00000505612 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 CACNA1SQ13698 1873 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 LRRC37AA6NMS7 1700 aa16.39■□□□□ 0.21
ITGA3-206ENST00000505612 YDJCA8MPS7 323 aa16.38■□□□□ 0.21
ITGA3-206ENST00000505612 PDE8BO95263 885 aa16.38■□□□□ 0.21
ITGA3-206ENST00000505612 IL15P40933 162 aaPredicted RBP16.38■□□□□ 0.21
ITGA3-206ENST00000505612 GMPSP49915 693 aaPredicted RBP16.38■□□□□ 0.21
ITGA3-206ENST00000505612 PTPN12Q05209 780 aaKnown RBP16.38■□□□□ 0.21
ITGA3-206ENST00000505612 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
ITGA3-206ENST00000505612 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
ITGA3-206ENST00000505612 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
ITGA3-206ENST00000505612 AGBL3Q8NEM8 1001 aa16.38■□□□□ 0.21
ITGA3-206ENST00000505612 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
ITGA3-206ENST00000505612 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
ITGA3-206ENST00000505612 PSMD14O00487 310 aa16.37■□□□□ 0.21
ITGA3-206ENST00000505612 SDSP20132 328 aa16.37■□□□□ 0.21
ITGA3-206ENST00000505612 SCNN1DP51172 638 aa16.37■□□□□ 0.21
ITGA3-206ENST00000505612 OS9Q13438 667 aaPredicted RBP16.37■□□□□ 0.21
ITGA3-206ENST00000505612 STRIP1Q5VSL9 837 aa16.37■□□□□ 0.21
ITGA3-206ENST00000505612 TBC1D9Q6ZT07 1266 aa16.37■□□□□ 0.21
ITGA3-206ENST00000505612 GPR101Q96P66 508 aaPredicted RBP16.37■□□□□ 0.21
ITGA3-206ENST00000505612 PUS3Q9BZE2 481 aaKnown RBP16.37■□□□□ 0.21
ITGA3-206ENST00000505612 CNOT7Q9UIV1 285 aaKnown RBP16.37■□□□□ 0.21
ITGA3-206ENST00000505612 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
ITGA3-206ENST00000505612 MYO3BQ8WXR4 1341 aa16.37■□□□□ 0.21
ITGA3-206ENST00000505612 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
ITGA3-206ENST00000505612 HIBADHP31937 336 aaKnown RBP16.36■□□□□ 0.21
ITGA3-206ENST00000505612 PUM3Q15397 648 aaKnown RBP16.36■□□□□ 0.21
ITGA3-206ENST00000505612 EAPPQ56P03 285 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms