RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 PPFIA3O75145 1194 aa23.07■■□□□ 1.28
SDHA-206ENST00000505555 ADAMTS2O95450 1211 aa23.07■■□□□ 1.28
SDHA-206ENST00000505555 HAND2P61296 217 aa23.07■■□□□ 1.28
SDHA-206ENST00000505555 PUS7LQ9H0K6 701 aaKnown RBP23.07■■□□□ 1.28
SDHA-206ENST00000505555 NAP1L2Q9ULW6 460 aaPredicted RBP23.07■■□□□ 1.28
SDHA-206ENST00000505555 UBN2Q6ZU65 1347 aa23.07■■□□□ 1.28
SDHA-206ENST00000505555 PFKFB2O60825 505 aa23.06■■□□□ 1.28
SDHA-206ENST00000505555 CCT2P78371 535 aaKnown RBP23.06■■□□□ 1.28
SDHA-206ENST00000505555 LETM1O95202 739 aaPredicted RBP23.06■■□□□ 1.28
SDHA-206ENST00000505555 MCAMP43121 646 aa23.06■■□□□ 1.28
SDHA-206ENST00000505555 FOSBP53539 338 aa23.06■■□□□ 1.28
SDHA-206ENST00000505555 LRP6O75581 1613 aa23.06■■□□□ 1.28
SDHA-206ENST00000505555 HCLS1P14317 486 aaPredicted RBP23.05■■□□□ 1.28
SDHA-206ENST00000505555 NCOA5Q9HCD5 579 aaKnown RBP23.05■■□□□ 1.28
SDHA-206ENST00000505555 CTDNEP1O95476 244 aa23.05■■□□□ 1.28
SDHA-206ENST00000505555 ACSBG1Q96GR2 724 aa23.05■■□□□ 1.28
SDHA-206ENST00000505555 LAMA4Q16363 1823 aa23.04■■□□□ 1.28
SDHA-206ENST00000505555 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
SDHA-206ENST00000505555 H3BQV1 296 aa23.04■■□□□ 1.28
SDHA-206ENST00000505555 IL6STP40189 918 aaPredicted RBP23.04■■□□□ 1.28
SDHA-206ENST00000505555 IFFO2Q5TF58 517 aa23.04■■□□□ 1.28
SDHA-206ENST00000505555 FAM184AQ8NB25 1140 aa23.04■■□□□ 1.28
SDHA-206ENST00000505555 GPHNQ9NQX3 736 aaPredicted RBP23.04■■□□□ 1.28
SDHA-206ENST00000505555 FGAP02671 866 aa23.04■■□□□ 1.28
SDHA-206ENST00000505555 ZFYP08048 801 aaPredicted RBP23.04■■□□□ 1.28
SDHA-206ENST00000505555 LRRFIP1Q32MZ4 808 aaKnown RBP23.04■■□□□ 1.28
SDHA-206ENST00000505555 NSUN7Q8NE18 718 aaKnown RBP23.04■■□□□ 1.28
SDHA-206ENST00000505555 SMARCC2Q8TAQ2 1214 aa23.04■■□□□ 1.28
SDHA-206ENST00000505555 SPATA32Q96LK8 384 aa23.04■■□□□ 1.28
SDHA-206ENST00000505555 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
SDHA-206ENST00000505555 ROBO1Q9Y6N7 1651 aa23.03■■□□□ 1.28
SDHA-206ENST00000505555 PDE8AO60658 829 aa23.03■■□□□ 1.28
SDHA-206ENST00000505555 LIG1P18858 919 aa23.03■■□□□ 1.28
SDHA-206ENST00000505555 VGLL2Q8N8G2 317 aa23.03■■□□□ 1.28
SDHA-206ENST00000505555 HELBQ8NG08 1087 aaPredicted RBP23.03■■□□□ 1.28
SDHA-206ENST00000505555 AGXT2Q9BYV1 514 aa23.03■■□□□ 1.28
SDHA-206ENST00000505555 COL16A1Q07092 1604 aaPredicted RBP23.03■■□□□ 1.28
SDHA-206ENST00000505555 ERVV-1B6SEH8 477 aa23.02■■□□□ 1.28
SDHA-206ENST00000505555 ZNF34Q8IZ26 560 aa23.02■■□□□ 1.28
SDHA-206ENST00000505555 APPBP2Q92624 585 aa23.02■■□□□ 1.28
SDHA-206ENST00000505555 RESTQ13127 1097 aa23.02■■□□□ 1.28
SDHA-206ENST00000505555 LEO1Q8WVC0 666 aaPredicted RBP23.02■■□□□ 1.28
SDHA-206ENST00000505555 SCAND2PQ9GZW5 306 aaPredicted RBP23.02■■□□□ 1.28
SDHA-206ENST00000505555 ELP1O95163 1332 aa23.02■■□□□ 1.28
SDHA-206ENST00000505555 MSNP26038 577 aaKnown RBP23.01■■□□□ 1.27
SDHA-206ENST00000505555 PDIA3P30101 505 aaKnown RBP23.01■■□□□ 1.27
SDHA-206ENST00000505555 HS1BP3Q53T59 392 aa23.01■■□□□ 1.27
SDHA-206ENST00000505555 FUCA2Q9BTY2 467 aa23.01■■□□□ 1.27
SDHA-206ENST00000505555 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.01■■□□□ 1.27
SDHA-206ENST00000505555 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
SDHA-206ENST00000505555 PDE8BO95263 885 aa23.01■■□□□ 1.27
SDHA-206ENST00000505555 CAMK4Q16566 473 aa23.01■■□□□ 1.27
SDHA-206ENST00000505555 LLPHQ9BRT6 129 aaKnown RBP23.01■■□□□ 1.27
SDHA-206ENST00000505555 CTNNA3Q9UI47 895 aa23.01■■□□□ 1.27
SDHA-206ENST00000505555 GPAA1O43292 621 aa23■■□□□ 1.27
SDHA-206ENST00000505555 DDB1Q16531 1140 aa23■■□□□ 1.27
SDHA-206ENST00000505555 IMMTQ16891 758 aaKnown RBP23■■□□□ 1.27
SDHA-206ENST00000505555 INTS5Q6P9B9 1019 aaKnown RBP23■■□□□ 1.27
SDHA-206ENST00000505555 PHKA1P46020 1223 aa23■■□□□ 1.27
SDHA-206ENST00000505555 SUSD4Q5VX71 490 aa23■■□□□ 1.27
SDHA-206ENST00000505555 PIH1D3Q9NQM4 214 aaKnown RBP23■■□□□ 1.27
SDHA-206ENST00000505555 NOL7Q9UMY1 257 aaKnown RBP23■■□□□ 1.27
SDHA-206ENST00000505555 ATP6V1AP38606 617 aa22.99■■□□□ 1.27
SDHA-206ENST00000505555 EIF5P55010 431 aaKnown RBP22.99■■□□□ 1.27
SDHA-206ENST00000505555 SLC9C2Q5TAH2 1124 aa22.99■■□□□ 1.27
SDHA-206ENST00000505555 NAP1L5Q96NT1 182 aaPredicted RBP22.99■■□□□ 1.27
SDHA-206ENST00000505555 USP25Q9UHP3 1055 aa22.99■■□□□ 1.27
SDHA-206ENST00000505555 GOLGA6L4A6NEF3 574 aa22.98■■□□□ 1.27
SDHA-206ENST00000505555 SNAP23O00161 211 aa22.98■■□□□ 1.27
SDHA-206ENST00000505555 NUP98P52948 1817 aa22.98■■□□□ 1.27
SDHA-206ENST00000505555 CEBPZQ03701 1054 aaKnown RBP22.98■■□□□ 1.27
SDHA-206ENST00000505555 CCDC102BQ68D86 513 aa22.98■■□□□ 1.27
SDHA-206ENST00000505555 SLIT2O94813 1529 aa22.98■■□□□ 1.27
SDHA-206ENST00000505555 SPATA31A1Q5TZJ5 1347 aa22.98■■□□□ 1.27
SDHA-206ENST00000505555 IDH1O75874 414 aaKnown RBP22.97■■□□□ 1.27
SDHA-206ENST00000505555 CRKLP46109 303 aaKnown RBP22.97■■□□□ 1.27
SDHA-206ENST00000505555 UVSSAQ2YD98 709 aa22.97■■□□□ 1.27
SDHA-206ENST00000505555 MARCH10Q8NA82 808 aaPredicted RBP22.97■■□□□ 1.27
SDHA-206ENST00000505555 ZNF274Q96GC6 653 aaPredicted RBP22.97■■□□□ 1.27
SDHA-206ENST00000505555 PGBD1Q96JS3 809 aa22.97■■□□□ 1.27
SDHA-206ENST00000505555 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.97■■□□□ 1.272e-6■□□□□ 10
SDHA-206ENST00000505555 ADD2P35612 726 aa22.97■■□□□ 1.27
SDHA-206ENST00000505555 MPNDQ8N594 471 aa22.97■■□□□ 1.27
SDHA-206ENST00000505555 CCDC87Q9NVE4 849 aa22.97■■□□□ 1.27
SDHA-206ENST00000505555 DACT1Q9NYF0 836 aa22.97■■□□□ 1.27
SDHA-206ENST00000505555 ABCC12Q96J65 1359 aa22.97■■□□□ 1.27
SDHA-206ENST00000505555 NWD2Q9ULI1 1742 aa22.96■■□□□ 1.27
SDHA-206ENST00000505555 GUCY1B3Q02153 619 aa22.96■■□□□ 1.27
SDHA-206ENST00000505555 SEC31BQ9NQW1 1179 aa22.96■■□□□ 1.27
SDHA-206ENST00000505555 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
SDHA-206ENST00000505555 ANKRD36CQ5JPF3 1778 aa22.96■■□□□ 1.27
SDHA-206ENST00000505555 PLCH1Q4KWH8 1693 aa22.96■■□□□ 1.27
SDHA-206ENST00000505555 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
SDHA-206ENST00000505555 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
SDHA-206ENST00000505555 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
SDHA-206ENST00000505555 ZSCAN16Q9H4T2 348 aaPredicted RBP22.96■■□□□ 1.27
SDHA-206ENST00000505555 CCDC39Q9UFE4 941 aa22.96■■□□□ 1.27
SDHA-206ENST00000505555 ZNF213O14771 459 aa22.95■■□□□ 1.26
SDHA-206ENST00000505555 PRC1O43663 620 aa22.95■■□□□ 1.26
SDHA-206ENST00000505555 HMGN5P82970 282 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms