RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-205ENST00000505458 NIP7Q9Y221 180 aaKnown RBP eCLIP13.44□□□□□ -0.26
NFKB1-205ENST00000505458 A0A0G2JS52 829 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 IGSF3O75054 1194 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 NTSR2O95665 410 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 ZMYM6O95789 1325 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
NFKB1-205ENST00000505458 IMMTQ16891 758 aaKnown RBP13.44□□□□□ -0.26
NFKB1-205ENST00000505458 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 PKP1Q13835 747 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 SUSD4Q5VX71 490 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 CCDC83Q8IWF9 413 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 BTAF1O14981 1849 aa13.44□□□□□ -0.26
NFKB1-205ENST00000505458 F13A1P00488 732 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 HSPD1P10809 573 aaKnown RBP13.43□□□□□ -0.26
NFKB1-205ENST00000505458 FGFR2P21802 821 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 GJB2P29033 226 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 C8orf37Q96NL8 207 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 DOCK2Q92608 1830 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 COL24A1Q17RW2 1714 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 SYT1P21579 422 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
NFKB1-205ENST00000505458 CYP21A2P08686 494 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 HMGN5P82970 282 aaKnown RBP13.43□□□□□ -0.26
NFKB1-205ENST00000505458 ME3Q16798 604 aa13.43□□□□□ -0.26
NFKB1-205ENST00000505458 GZF1Q9H116 711 aaPredicted RBP13.43□□□□□ -0.26
NFKB1-205ENST00000505458 LAMA4Q16363 1823 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 ZBTB22O15209 634 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 PRPF40AO75400 957 aaKnown RBP13.42□□□□□ -0.26
NFKB1-205ENST00000505458 FGD1P98174 961 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
NFKB1-205ENST00000505458 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 LY75O60449 1722 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 LETM1O95202 739 aaPredicted RBP13.42□□□□□ -0.26
NFKB1-205ENST00000505458 ADORA1P30542 326 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 GRPEL1Q9HAV7 217 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
NFKB1-205ENST00000505458 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 USP21Q9UK80 565 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 TPCN1Q9ULQ1 816 aa13.42□□□□□ -0.26
NFKB1-205ENST00000505458 TOB2Q14106 344 aaPredicted RBP13.41□□□□□ -0.26
NFKB1-205ENST00000505458 RPS6KA4O75676 772 aa13.41□□□□□ -0.26
NFKB1-205ENST00000505458 ADD2P35612 726 aa13.41□□□□□ -0.26
NFKB1-205ENST00000505458 ZAP70P43403 619 aa13.41□□□□□ -0.26
NFKB1-205ENST00000505458 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
NFKB1-205ENST00000505458 GNL3LQ9NVN8 582 aaKnown RBP13.41□□□□□ -0.26
NFKB1-205ENST00000505458 MAP3K12Q12852 859 aa13.41□□□□□ -0.26
NFKB1-205ENST00000505458 CCDC102BQ68D86 513 aa13.41□□□□□ -0.26
NFKB1-205ENST00000505458 ZNF274Q96GC6 653 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-205ENST00000505458 PFKFB2O60825 505 aa13.4□□□□□ -0.26
NFKB1-205ENST00000505458 GNAT2P19087 354 aa13.4□□□□□ -0.26
NFKB1-205ENST00000505458 CCDC129Q6ZRS4 1044 aa13.4□□□□□ -0.26
NFKB1-205ENST00000505458 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
NFKB1-205ENST00000505458 NARFQ9UHQ1 456 aa13.4□□□□□ -0.26
NFKB1-205ENST00000505458 DHX16O60231 1041 aaKnown RBP13.4□□□□□ -0.26
NFKB1-205ENST00000505458 CPA1P15085 419 aa13.4□□□□□ -0.26
NFKB1-205ENST00000505458 MCAMP43121 646 aa13.4□□□□□ -0.26
NFKB1-205ENST00000505458 ALX1Q15699 326 aa13.4□□□□□ -0.26
NFKB1-205ENST00000505458 LARP1BQ659C4 914 aaKnown RBP13.4□□□□□ -0.26
NFKB1-205ENST00000505458 SEC62Q99442 399 aaKnown RBP13.4□□□□□ -0.26
NFKB1-205ENST00000505458 MTMR6Q9Y217 621 aa13.4□□□□□ -0.26
NFKB1-205ENST00000505458 LARGE1O95461 756 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 UBE2HP62256 183 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 EXOSC10Q01780 885 aaKnown RBP13.39□□□□□ -0.27
NFKB1-205ENST00000505458 Q6ZUG5 572 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 OSBP2Q969R2 916 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 E7EWF7 191 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 M0R2C6 588 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 SEMA3EO15041 775 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 EVCP57679 992 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
NFKB1-205ENST00000505458 TRDNQ13061 729 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
NFKB1-205ENST00000505458 RALYLQ86SE5 291 aaKnown RBP13.38□□□□□ -0.27
NFKB1-205ENST00000505458 LINC00116Q8NCU8 138 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-205ENST00000505458 A0A1B0GUL6 1792 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 ELP1O95163 1332 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 GPAA1O43292 621 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 KRT85P78386 507 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 ATL3Q6DD88 541 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 SYNE4Q8N205 404 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 SPATA5Q8NB90 893 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 NCOA7Q8NI08 942 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 PDS5AQ29RF7 1337 aaKnown RBP13.38□□□□□ -0.27
NFKB1-205ENST00000505458 HCLS1P14317 486 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-205ENST00000505458 ADRA2BP18089 450 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 MCM5P33992 734 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 ZSCAN23Q3MJ62 389 aa13.38□□□□□ -0.27
NFKB1-205ENST00000505458 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
NFKB1-205ENST00000505458 SCAND2PQ9GZW5 306 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-205ENST00000505458 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-205ENST00000505458 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
NFKB1-205ENST00000505458 ZNF213O14771 459 aa13.37□□□□□ -0.27
NFKB1-205ENST00000505458 ZPR1O75312 459 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms