RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-206ENST00000505226 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
UBE3D-206ENST00000505226 KMT5BQ4FZB7 885 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 AGXT2Q9BYV1 514 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 KDM6AO15550 1401 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-206ENST00000505226 FAM160A1Q05DH4 1040 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 OTUD7BQ6GQQ9 843 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 FSIP1Q8NA03 581 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 KBTBD3Q8NAB2 608 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 KIF18AQ8NI77 898 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 PCDHA7Q9UN72 937 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 ADAMTS7Q9UKP4 1686 aa13.93□□□□□ -0.18
UBE3D-206ENST00000505226 NEDD4P46934 1319 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 BECN2A8MW95 431 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 CTAGE5O15320 804 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 PDIA3P30101 505 aaKnown RBP13.92□□□□□ -0.18
UBE3D-206ENST00000505226 ME1P48163 572 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 PTPN14Q15678 1187 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 FMR1NBQ8N0W7 255 aaPredicted RBP13.92□□□□□ -0.18
UBE3D-206ENST00000505226 CCAR2Q8N163 923 aaKnown RBP13.92□□□□□ -0.18
UBE3D-206ENST00000505226 SYTL4Q96C24 671 aaPredicted RBP13.92□□□□□ -0.18
UBE3D-206ENST00000505226 GOLIM4O00461 696 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 CASP7P55210 303 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
UBE3D-206ENST00000505226 A0A1B0GVL5 298 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 E7EWF7 191 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 TIMM10P62072 90 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 TTLL5Q6EMB2 1281 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 CCDC73Q6ZRK6 1079 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 CGNQ9P2M7 1197 aaKnown RBP13.91□□□□□ -0.18
UBE3D-206ENST00000505226 SH3TC1Q8TE82 1336 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 KINO60870 393 aaKnown RBP13.91□□□□□ -0.18
UBE3D-206ENST00000505226 KIF20AO95235 890 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 MORC2Q9Y6X9 1032 aaPredicted RBP13.91□□□□□ -0.18
UBE3D-206ENST00000505226 NDUFA8P51970 172 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 GJB4Q9NTQ9 266 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
UBE3D-206ENST00000505226 RFX7Q2KHR2 1363 aa13.91□□□□□ -0.18
UBE3D-206ENST00000505226 A0A087WZG4 1122 aa13.9□□□□□ -0.18
UBE3D-206ENST00000505226 HSPD1P10809 573 aaKnown RBP13.9□□□□□ -0.18
UBE3D-206ENST00000505226 DPCR1Q3MIW9 517 aa13.9□□□□□ -0.18
UBE3D-206ENST00000505226 ATG9AQ7Z3C6 839 aa13.9□□□□□ -0.18
UBE3D-206ENST00000505226 LRRN4CLQ8ND94 238 aa13.9□□□□□ -0.18
UBE3D-206ENST00000505226 ANO10Q9NW15 660 aa13.9□□□□□ -0.18
UBE3D-206ENST00000505226 RGPD5Q99666 1765 aa13.9□□□□□ -0.18
UBE3D-206ENST00000505226 E4F1Q66K89 784 aaPredicted RBP13.9□□□□□ -0.18
UBE3D-206ENST00000505226 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
UBE3D-206ENST00000505226 CLIC4Q9Y696 253 aa13.9□□□□□ -0.18
UBE3D-206ENST00000505226 CARMIL3Q8ND23 1372 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 NEMFO60524 1076 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 HMGB1P09429 215 aaKnown RBP13.89□□□□□ -0.19
UBE3D-206ENST00000505226 ELF2Q15723 593 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 FBXO38Q6PIJ6 1188 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 NEUROD6Q96NK8 337 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 PAG1Q9NWQ8 432 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 CAMTA1Q9Y6Y1 1673 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 SLFN14P0C7P3 912 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 FOXO4P98177 505 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 ZMYM1Q5SVZ6 1142 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 ARMCX5Q6P1M9 558 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 ABCC6O95255 1503 aa13.89□□□□□ -0.19
UBE3D-206ENST00000505226 ZNF396Q96N95 335 aaPredicted RBP13.88□□□□□ -0.19
UBE3D-206ENST00000505226 DSCC1Q9BVC3 393 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 SLIT3O75094 1523 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 MAST3O60307 1309 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 AFDNP55196 1824 aaKnown RBP13.88□□□□□ -0.19
UBE3D-206ENST00000505226 FOXP2O15409 715 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 CEP57L1Q8IYX8 460 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 LINC00301Q8NCQ3 95 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 ZNF446Q9NWS9 450 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 M0R2C6 588 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 POLR3DP05423 398 aaPredicted RBP13.88□□□□□ -0.19
UBE3D-206ENST00000505226 MRPS27Q92552 414 aaKnown RBP13.88□□□□□ -0.19
UBE3D-206ENST00000505226 SDF4Q9BRK5 362 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 XPO4Q9C0E2 1151 aaKnown RBP13.88□□□□□ -0.19
UBE3D-206ENST00000505226 OSBPL5Q9H0X9 879 aaPredicted RBP13.88□□□□□ -0.19
UBE3D-206ENST00000505226 HELLSQ9NRZ9 838 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 KCND1Q9NSA2 647 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 FAM53CQ9NYF3 392 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 RTEL1Q9NZ71 1219 aa13.88□□□□□ -0.19
UBE3D-206ENST00000505226 NPHP1O15259 732 aa13.87□□□□□ -0.19
UBE3D-206ENST00000505226 PHKG2P15735 406 aa13.87□□□□□ -0.19
UBE3D-206ENST00000505226 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
UBE3D-206ENST00000505226 ADALQ6DHV7 355 aa13.87□□□□□ -0.19
UBE3D-206ENST00000505226 KIAA1468Q9P260 1216 aa13.87□□□□□ -0.19
UBE3D-206ENST00000505226 BIN1O00499 593 aa13.87□□□□□ -0.19
UBE3D-206ENST00000505226 RAB11FIP4Q86YS3 637 aa13.87□□□□□ -0.19
UBE3D-206ENST00000505226 ZNF274Q96GC6 653 aaPredicted RBP13.87□□□□□ -0.19
UBE3D-206ENST00000505226 ST7Q9NRC1 585 aa13.87□□□□□ -0.19
UBE3D-206ENST00000505226 LRRC24Q50LG9 513 aa13.86□□□□□ -0.19
UBE3D-206ENST00000505226 ATL3Q6DD88 541 aa13.86□□□□□ -0.19
UBE3D-206ENST00000505226 ZNF397Q8NF99 534 aaPredicted RBP13.86□□□□□ -0.19
UBE3D-206ENST00000505226 ZNF594Q96JF6 807 aaPredicted RBP13.86□□□□□ -0.19
UBE3D-206ENST00000505226 IFNKQ9P0W0 207 aa13.86□□□□□ -0.19
UBE3D-206ENST00000505226 SCN11AQ9UI33 1791 aa13.86□□□□□ -0.19
UBE3D-206ENST00000505226 NCAPHQ15003 741 aa13.86□□□□□ -0.19
UBE3D-206ENST00000505226 OSBP2Q969R2 916 aa13.86□□□□□ -0.19
UBE3D-206ENST00000505226 PPP1R13BQ96KQ4 1090 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms