RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 EIF6P56537 245 aaKnown RBP15.4■□□□□ 0.06
SNCA-208ENST00000505199 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
SNCA-208ENST00000505199 GPC2Q8N158 579 aa15.4■□□□□ 0.06
SNCA-208ENST00000505199 SIL1Q9H173 461 aa15.4■□□□□ 0.06
SNCA-208ENST00000505199 KDM2BQ8NHM5 1336 aa15.4■□□□□ 0.06
SNCA-208ENST00000505199 GLTPD2A6NH11 291 aa15.39■□□□□ 0.05
SNCA-208ENST00000505199 IL1R1P14778 569 aa15.39■□□□□ 0.05
SNCA-208ENST00000505199 TNIP1Q15025 636 aa15.39■□□□□ 0.05
SNCA-208ENST00000505199 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
SNCA-208ENST00000505199 KIF1BPQ96EK5 621 aa15.39■□□□□ 0.05
SNCA-208ENST00000505199 DCTPP1Q9H773 170 aa15.39■□□□□ 0.05
SNCA-208ENST00000505199 G3V3G9 751 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 SEMA3EO15041 775 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 IGSF3O75054 1194 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 SASH1O94885 1247 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 RPS12P25398 132 aaKnown RBP15.38■□□□□ 0.05
SNCA-208ENST00000505199 OS9Q13438 667 aaPredicted RBP15.38■□□□□ 0.05
SNCA-208ENST00000505199 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 HELBQ8NG08 1087 aaPredicted RBP15.38■□□□□ 0.05
SNCA-208ENST00000505199 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
SNCA-208ENST00000505199 PCDHB15Q9Y5E8 787 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 PDS5AQ29RF7 1337 aaKnown RBP15.38■□□□□ 0.05
SNCA-208ENST00000505199 MYO3BQ8WXR4 1341 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 COL4A5P29400 1685 aa15.38■□□□□ 0.05
SNCA-208ENST00000505199 ECE2O60344 883 aa15.37■□□□□ 0.05
SNCA-208ENST00000505199 HIBADHP31937 336 aaKnown RBP15.37■□□□□ 0.05
SNCA-208ENST00000505199 FKBP1AP62942 108 aaKnown RBP15.37■□□□□ 0.05
SNCA-208ENST00000505199 STRIP1Q5VSL9 837 aa15.37■□□□□ 0.05
SNCA-208ENST00000505199 ERICH6BQ5W0A0 696 aa15.37■□□□□ 0.05
SNCA-208ENST00000505199 SLC51AQ86UW1 340 aa15.37■□□□□ 0.05
SNCA-208ENST00000505199 GCC1Q96CN9 775 aa15.37■□□□□ 0.05
SNCA-208ENST00000505199 CD209Q9NNX6 404 aa15.37■□□□□ 0.05
SNCA-208ENST00000505199 GNL3LQ9NVN8 582 aaKnown RBP15.37■□□□□ 0.05
SNCA-208ENST00000505199 SCN4AP35499 1836 aa15.36■□□□□ 0.05
SNCA-208ENST00000505199 TFCP2Q12800 502 aa15.36■□□□□ 0.05
SNCA-208ENST00000505199 CIAPIN1Q6FI81 312 aa15.36■□□□□ 0.05
SNCA-208ENST00000505199 VPS37DQ86XT2 251 aa15.36■□□□□ 0.05
SNCA-208ENST00000505199 EXOC6Q8TAG9 804 aa15.36■□□□□ 0.05
SNCA-208ENST00000505199 RHPN1Q8TCX5 695 aa15.36■□□□□ 0.05
SNCA-208ENST00000505199 DPF2Q92785 391 aa15.36■□□□□ 0.05
SNCA-208ENST00000505199 ZNF512BQ96KM6 892 aaPredicted RBP15.36■□□□□ 0.05
SNCA-208ENST00000505199 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
SNCA-208ENST00000505199 RWDD1Q9H446 243 aaPredicted RBP15.36■□□□□ 0.05
SNCA-208ENST00000505199 WDR90Q96KV7 1748 aa15.36■□□□□ 0.05
SNCA-208ENST00000505199 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
SNCA-208ENST00000505199 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
SNCA-208ENST00000505199 RIMBP2O15034 1052 aa15.35■□□□□ 0.05
SNCA-208ENST00000505199 VIL1P09327 827 aaKnown RBP15.35■□□□□ 0.05
SNCA-208ENST00000505199 YY1P25490 414 aa15.35■□□□□ 0.05
SNCA-208ENST00000505199 CXCL9Q07325 125 aa15.35■□□□□ 0.05
SNCA-208ENST00000505199 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
SNCA-208ENST00000505199 CLASRPQ8N2M8 674 aaKnown RBP15.35■□□□□ 0.05
SNCA-208ENST00000505199 AGBL3Q8NEM8 1001 aa15.35■□□□□ 0.05
SNCA-208ENST00000505199 TDRD7Q8NHU6 1098 aaKnown RBP15.35■□□□□ 0.05
SNCA-208ENST00000505199 USP17L3A6NCW0 530 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 USP17L4A6NCW7 530 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 YDJCA8MPS7 323 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 USP17L1Q7RTZ2 530 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 TBC1D22AQ8WUA7 517 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 DBNDD1Q9H9R9 158 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 EXOC6BQ9Y2D4 811 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 SUGT1Q9Y2Z0 365 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 FAM205AQ6ZU69 1335 aa15.34■□□□□ 0.05
SNCA-208ENST00000505199 SCN9AQ15858 1988 aa15.33■□□□□ 0.05
SNCA-208ENST00000505199 NEFLP07196 543 aa15.33■□□□□ 0.04
SNCA-208ENST00000505199 WTIPA6NIX2 430 aaPredicted RBP15.32■□□□□ 0.04
SNCA-208ENST00000505199 SNAP23O00161 211 aa15.32■□□□□ 0.04
SNCA-208ENST00000505199 KLRK1P26718 216 aa15.32■□□□□ 0.04
SNCA-208ENST00000505199 DOK7Q18PE1 504 aa15.32■□□□□ 0.04
SNCA-208ENST00000505199 TMED8Q6PL24 325 aaPredicted RBP15.32■□□□□ 0.04
SNCA-208ENST00000505199 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
SNCA-208ENST00000505199 XAGE2Q96GT9 111 aa15.32■□□□□ 0.04
SNCA-208ENST00000505199 ZNF541Q9H0D2 1346 aa15.32■□□□□ 0.04
SNCA-208ENST00000505199 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
SNCA-208ENST00000505199 UQCRFS1P1P0C7P4 283 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 ARID4AP29374 1257 aaPredicted RBP15.31■□□□□ 0.04
SNCA-208ENST00000505199 GYG1P46976 350 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 CCDC158Q5M9N0 1113 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 DACT2Q5SW24 774 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 CCDC102BQ68D86 513 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 TTLL5Q6EMB2 1281 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 WDR66Q8TBY9 1149 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 GPR101Q96P66 508 aaPredicted RBP15.31■□□□□ 0.04
SNCA-208ENST00000505199 DENND2AQ9ULE3 1009 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 SALL1Q9NSC2 1324 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 MYH13Q9UKX3 1938 aa15.31■□□□□ 0.04
SNCA-208ENST00000505199 PSMD14O00487 310 aa15.3■□□□□ 0.04
SNCA-208ENST00000505199 VEGFAP15692 232 aaPredicted RBP15.3■□□□□ 0.04
SNCA-208ENST00000505199 BCAMP50895 628 aa15.3■□□□□ 0.04
SNCA-208ENST00000505199 TIMM10P62072 90 aa15.3■□□□□ 0.04
SNCA-208ENST00000505199 GORABQ5T7V8 394 aa15.3■□□□□ 0.04
SNCA-208ENST00000505199 RSBN1LQ6PCB5 846 aaPredicted RBP15.3■□□□□ 0.04
SNCA-208ENST00000505199 ZGPATQ8N5A5 531 aaKnown RBP15.3■□□□□ 0.04
SNCA-208ENST00000505199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNCA-208ENST00000505199 EAF2Q96CJ1 260 aaPredicted RBP15.3■□□□□ 0.04
SNCA-208ENST00000505199 NEUROD6Q96NK8 337 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms