RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ADARB2Q9NS39 739 aaKnown RBP12.23□□□□□ -0.45
NR1I3-220ENST00000505005 GNL3LQ9NVN8 582 aaKnown RBP12.23□□□□□ -0.45
NR1I3-220ENST00000505005 HDAC9Q9UKV0 1011 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 TAF1P21675 1872 aa12.23□□□□□ -0.45
NR1I3-220ENST00000505005 KIF3CO14782 793 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 SRGAP3O43295 1099 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 IGSF3O75054 1194 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 VIL1P09327 827 aaKnown RBP12.22□□□□□ -0.45
NR1I3-220ENST00000505005 EPHX2P34913 555 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 PRELPP51888 382 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 G3BP1Q13283 466 aaKnown RBP eCLIP12.22□□□□□ -0.45
NR1I3-220ENST00000505005 PUM3Q15397 648 aaKnown RBP12.22□□□□□ -0.45
NR1I3-220ENST00000505005 EPHA10Q5JZY3 1008 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 RPAP2Q8IXW5 612 aaPredicted RBP12.22□□□□□ -0.45
NR1I3-220ENST00000505005 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 ANKRD44Q8N8A2 993 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 MEIS3Q99687 375 aa12.22□□□□□ -0.45
NR1I3-220ENST00000505005 LRRFIP2Q9Y608 721 aaKnown RBP12.22□□□□□ -0.45
NR1I3-220ENST00000505005 ZNF609O15014 1411 aa12.21□□□□□ -0.45
NR1I3-220ENST00000505005 ZBTB7BO15156 539 aaPredicted RBP12.21□□□□□ -0.45
NR1I3-220ENST00000505005 SLC5A1P13866 664 aa12.21□□□□□ -0.45
NR1I3-220ENST00000505005 HIBADHP31937 336 aaKnown RBP12.21□□□□□ -0.45
NR1I3-220ENST00000505005 MVPQ14764 893 aaKnown RBP12.21□□□□□ -0.45
NR1I3-220ENST00000505005 ERC1Q8IUD2 1116 aa12.21□□□□□ -0.45
NR1I3-220ENST00000505005 TBC1D22AQ8WUA7 517 aa12.21□□□□□ -0.45
NR1I3-220ENST00000505005 LPIN2Q92539 896 aa12.21□□□□□ -0.45
NR1I3-220ENST00000505005 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
NR1I3-220ENST00000505005 NMRK2Q9NPI5 230 aa12.21□□□□□ -0.45
NR1I3-220ENST00000505005 GPRC5DQ9NZD1 345 aa12.21□□□□□ -0.45
NR1I3-220ENST00000505005 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
NR1I3-220ENST00000505005 FRAT2O75474 233 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-220ENST00000505005 SASH1O94885 1247 aa12.2□□□□□ -0.46
NR1I3-220ENST00000505005 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
NR1I3-220ENST00000505005 PTPN12Q05209 780 aaKnown RBP12.2□□□□□ -0.46
NR1I3-220ENST00000505005 TTLL5Q6EMB2 1281 aa12.2□□□□□ -0.46
NR1I3-220ENST00000505005 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
NR1I3-220ENST00000505005 DBNDD1Q9H9R9 158 aa12.2□□□□□ -0.46
NR1I3-220ENST00000505005 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
NR1I3-220ENST00000505005 ZNF541Q9H0D2 1346 aa12.19□□□□□ -0.46
NR1I3-220ENST00000505005 SEMA3EO15041 775 aa12.19□□□□□ -0.46
NR1I3-220ENST00000505005 PLIN1O60240 522 aa12.19□□□□□ -0.46
NR1I3-220ENST00000505005 RAD17O75943 681 aa12.19□□□□□ -0.46
NR1I3-220ENST00000505005 IL1R1P14778 569 aa12.19□□□□□ -0.46
NR1I3-220ENST00000505005 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
NR1I3-220ENST00000505005 CD209Q9NNX6 404 aa12.19□□□□□ -0.46
NR1I3-220ENST00000505005 CNOT7Q9UIV1 285 aaKnown RBP12.19□□□□□ -0.46
NR1I3-220ENST00000505005 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
NR1I3-220ENST00000505005 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
NR1I3-220ENST00000505005 PSMD14O00487 310 aa12.18□□□□□ -0.46
NR1I3-220ENST00000505005 USP17L8P0C7I0 530 aa12.18□□□□□ -0.46
NR1I3-220ENST00000505005 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
NR1I3-220ENST00000505005 APLP1P51693 650 aa12.18□□□□□ -0.46
NR1I3-220ENST00000505005 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
NR1I3-220ENST00000505005 ZGPATQ8N5A5 531 aaKnown RBP12.18□□□□□ -0.46
NR1I3-220ENST00000505005 SSH3Q8TE77 659 aa12.18□□□□□ -0.46
NR1I3-220ENST00000505005 ZNF594Q96JF6 807 aaPredicted RBP12.18□□□□□ -0.46
NR1I3-220ENST00000505005 GPR108Q9NPR9 543 aa12.18□□□□□ -0.46
NR1I3-220ENST00000505005 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
NR1I3-220ENST00000505005 MAST3O60307 1309 aa12.17□□□□□ -0.46
NR1I3-220ENST00000505005 SPEF2Q9C093 1822 aa12.17□□□□□ -0.46
NR1I3-220ENST00000505005 TAF5LO75529 589 aa12.17□□□□□ -0.46
NR1I3-220ENST00000505005 GMPSP49915 693 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-220ENST00000505005 OS9Q13438 667 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-220ENST00000505005 YTHDC1Q96MU7 727 aaKnown RBP12.17□□□□□ -0.46
NR1I3-220ENST00000505005 YDJCA8MPS7 323 aa12.16□□□□□ -0.46
NR1I3-220ENST00000505005 POTECB2RU33 542 aa12.16□□□□□ -0.46
NR1I3-220ENST00000505005 MYO1BO43795 1136 aa12.16□□□□□ -0.46
NR1I3-220ENST00000505005 SCNN1DP51172 638 aa12.16□□□□□ -0.46
NR1I3-220ENST00000505005 ATP2B3Q16720 1220 aa12.16□□□□□ -0.46
NR1I3-220ENST00000505005 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-220ENST00000505005 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-220ENST00000505005 HELBQ8NG08 1087 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-220ENST00000505005 WDR66Q8TBY9 1149 aa12.16□□□□□ -0.46
NR1I3-220ENST00000505005 MRIQ9BWK5 157 aa12.16□□□□□ -0.46
NR1I3-220ENST00000505005 FAM205AQ6ZU69 1335 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 HSPA6P17066 643 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 HDLBPQ00341 1268 aaKnown RBP12.15□□□□□ -0.46
NR1I3-220ENST00000505005 POLA2Q14181 598 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 GORABQ5T7V8 394 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 MICALL2Q8IY33 904 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 TDRD7Q8NHU6 1098 aaKnown RBP12.15□□□□□ -0.46
NR1I3-220ENST00000505005 DCPSQ96C86 337 aaKnown RBP12.15□□□□□ -0.46
NR1I3-220ENST00000505005 FAM84BQ96KN1 310 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-220ENST00000505005 PUS3Q9BZE2 481 aaKnown RBP12.15□□□□□ -0.46
NR1I3-220ENST00000505005 PGAP2Q9UHJ9 254 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 DENND2AQ9ULE3 1009 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 NOP58Q9Y2X3 529 aaKnown RBP12.15□□□□□ -0.46
NR1I3-220ENST00000505005 PSME4Q14997 1843 aa12.15□□□□□ -0.46
NR1I3-220ENST00000505005 SURF6O75683 361 aaKnown RBP12.14□□□□□ -0.47
NR1I3-220ENST00000505005 FGFR2P21802 821 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-220ENST00000505005 GTF2IP78347 998 aa12.14□□□□□ -0.47
NR1I3-220ENST00000505005 CCDC158Q5M9N0 1113 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms