RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 MXD3Q9BW11 206 aa8.95□□□□□ -0.98
NPIPB3-203ENST00000504841 HYPKQ9NX55 129 aa8.95□□□□□ -0.98
NPIPB3-203ENST00000504841 PODXL2Q9NZ53 605 aa8.95□□□□□ -0.98
NPIPB3-203ENST00000504841 XDHP47989 1333 aa8.95□□□□□ -0.98
NPIPB3-203ENST00000504841 SASH1O94885 1247 aa8.94□□□□□ -0.98
NPIPB3-203ENST00000504841 NBPF9Q3BBW0 867 aa8.94□□□□□ -0.98
NPIPB3-203ENST00000504841 FBXO46Q6PJ61 603 aaPredicted RBP8.94□□□□□ -0.98
NPIPB3-203ENST00000504841 ANKRD18AQ8IVF6 992 aa8.94□□□□□ -0.98
NPIPB3-203ENST00000504841 PITPNM2Q9BZ72 1349 aa8.94□□□□□ -0.98
NPIPB3-203ENST00000504841 ZNF609O15014 1411 aa8.94□□□□□ -0.98
NPIPB3-203ENST00000504841 PSME4Q14997 1843 aa8.94□□□□□ -0.98
NPIPB3-203ENST00000504841 ELL2O00472 640 aaPredicted RBP8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 PDE8AO60658 829 aa8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 FKTNO75072 461 aa8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 HOXB7P09629 217 aa8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 HSP90B1P14625 803 aaKnown RBP8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 ATP2B4P23634 1241 aa8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 SREBF2Q12772 1141 aa8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 GMLQ99445 158 aa8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 PHAXQ9H814 394 aaKnown RBP8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 TRIM35Q9UPQ4 493 aa8.93□□□□□ -0.98
NPIPB3-203ENST00000504841 SPEF2Q9C093 1822 aa8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 WTIPA6NIX2 430 aaPredicted RBP8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 WNT10BO00744 389 aa8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 PCCAP05165 728 aaPredicted RBP8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 PTPN12Q05209 780 aaKnown RBP8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 TRIM28Q13263 835 aaKnown RBP8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 WDR43Q15061 677 aaKnown RBP eCLIP8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 ARMC9Q7Z3E5 817 aa8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 PODNQ7Z5L7 613 aa8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 R3HDMLQ9H3Y0 253 aa8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 MBIPQ9NS73 344 aa8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 CWC25Q9NXE8 425 aaPredicted RBP8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 ANGEL1Q9UNK9 670 aaKnown RBP8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 FZD1Q9UP38 647 aa8.92□□□□□ -0.98
NPIPB3-203ENST00000504841 MED23Q9ULK4 1368 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 TM4SF4P48230 202 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 CTSWP56202 376 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 DACT2Q5SW24 774 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 KIAA0825Q8IV33 1275 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 CCDC191Q8NCU4 936 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 RUNDC1Q96C34 613 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 GCC1Q96CN9 775 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 CDC5LQ99459 802 aaKnown RBP8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 TRIM17Q9Y577 477 aa8.91□□□□□ -0.98
NPIPB3-203ENST00000504841 RALBP1Q15311 655 aa8.9□□□□□ -0.98
NPIPB3-203ENST00000504841 SPRYD7Q5W111 196 aa8.9□□□□□ -0.98
NPIPB3-203ENST00000504841 APOBEC3FQ8IUX4 373 aaKnown RBP8.9□□□□□ -0.98
NPIPB3-203ENST00000504841 MINPP1Q9UNW1 487 aa8.9□□□□□ -0.98
NPIPB3-203ENST00000504841 MYO3BQ8WXR4 1341 aa8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 POTEFA5A3E0 1075 aa8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 KLRK1P26718 216 aa8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 CCT4P50991 539 aaKnown RBP8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 NOM1Q5C9Z4 860 aaKnown RBP8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 STRIP1Q5VSL9 837 aa8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 TXNRD3Q86VQ6 643 aa8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 METTL22Q9BUU2 404 aaPredicted RBP8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 COA1Q9GZY4 146 aa8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 GREM2Q9H772 168 aa8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 MAP3K2Q9Y2U5 619 aa8.89□□□□□ -0.99
NPIPB3-203ENST00000504841 MYBBP1AQ9BQG0 1328 aaKnown RBP8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 MANSC4A6NHS7 340 aaPredicted RBP8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 TNRC18O15417 2968 aaPredicted RBP8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 DDX58O95786 925 aaKnown RBP8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 IGHMBP2P38935 993 aaKnown RBP8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 KCNJ4P48050 445 aa8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 GTF2IP78347 998 aa8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 HABP4Q5JVS0 413 aaKnown RBP8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 TTLL5Q6EMB2 1281 aa8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 OTOP1Q7RTM1 612 aa8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 SLC10A4Q96EP9 437 aa8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 CLMNQ96JQ2 1002 aa8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 ZNF646O15015 1829 aaPredicted RBP8.88□□□□□ -0.99
NPIPB3-203ENST00000504841 ZNF804BA4D1E1 1349 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 CLRN2A0PK11 232 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 F8W031 263 aaPredicted RBP8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 IGF2BP3O00425 579 aaKnown RBP eCLIP8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 DLGAP5Q15398 846 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 CWF19L2Q2TBE0 894 aaKnown RBP8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 LDLRAD1Q5T700 205 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 UBE3BQ7Z3V4 1068 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 IFNL1Q8IU54 200 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 TTLL11Q8NHH1 800 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 CD99L2Q8TCZ2 262 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 DEFB129Q9H1M3 183 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 VEZTQ9HBM0 779 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 BSDC1Q9NW68 430 aaPredicted RBP8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 ADAMTS8Q9UP79 889 aa8.87□□□□□ -0.99
NPIPB3-203ENST00000504841 SSC5DA1L4H1 1573 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 COL1A1P02452 1464 aaPredicted RBP8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 PI4KAP2A4QPH2 592 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 PPP1R12BO60237 982 aaPredicted RBP8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 IGKV5-2P06315 115 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 NEXNQ0ZGT2 675 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 CCDC30Q5VVM6 783 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 PI4KAP1Q8N8J0 262 aa8.86□□□□□ -0.99
NPIPB3-203ENST00000504841 C8orf58Q8NAV2 365 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms