RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 NBPF9Q3BBW0 867 aa15.55■□□□□ 0.08
NEDD9-209ENST00000504634 MOB2Q70IA6 237 aa15.55■□□□□ 0.08
NEDD9-209ENST00000504634 PI4KAP1Q8N8J0 262 aa15.55■□□□□ 0.08
NEDD9-209ENST00000504634 TTLL11Q8NHH1 800 aa15.55■□□□□ 0.08
NEDD9-209ENST00000504634 GREM2Q9H772 168 aa15.55■□□□□ 0.08
NEDD9-209ENST00000504634 WTIPA6NIX2 430 aaPredicted RBP15.54■□□□□ 0.08
NEDD9-209ENST00000504634 IGKV5-2P06315 115 aa15.54■□□□□ 0.08
NEDD9-209ENST00000504634 NF2P35240 595 aa15.54■□□□□ 0.08
NEDD9-209ENST00000504634 IGHMBP2P38935 993 aaKnown RBP15.54■□□□□ 0.08
NEDD9-209ENST00000504634 CCT4P50991 539 aaKnown RBP15.54■□□□□ 0.08
NEDD9-209ENST00000504634 PRAMEF18Q5VWM3 479 aa15.54■□□□□ 0.08
NEDD9-209ENST00000504634 MXD3Q9BW11 206 aa15.54■□□□□ 0.08
NEDD9-209ENST00000504634 HDAC9Q9UKV0 1011 aa15.54■□□□□ 0.08
NEDD9-209ENST00000504634 MYO3BQ8WXR4 1341 aa15.53■□□□□ 0.08
NEDD9-209ENST00000504634 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
NEDD9-209ENST00000504634 TSPYL6Q8N831 410 aa15.53■□□□□ 0.08
NEDD9-209ENST00000504634 COA1Q9GZY4 146 aa15.53■□□□□ 0.08
NEDD9-209ENST00000504634 CWF19L2Q2TBE0 894 aaKnown RBP15.52■□□□□ 0.08
NEDD9-209ENST00000504634 STRIP1Q5VSL9 837 aa15.52■□□□□ 0.08
NEDD9-209ENST00000504634 UBE3BQ7Z3V4 1068 aa15.52■□□□□ 0.08
NEDD9-209ENST00000504634 SCN9AQ15858 1988 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 NEURL1BA8MQ27 555 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 WNT10BO00744 389 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 SASH1O94885 1247 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 KCNJ4P48050 445 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 MKRN3Q13064 507 aaKnown RBP15.51■□□□□ 0.07
NEDD9-209ENST00000504634 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
NEDD9-209ENST00000504634 MPHOSPH8Q99549 860 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 ANKRD2Q9GZV1 360 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 LEMD3Q9Y2U8 911 aa15.51■□□□□ 0.07
NEDD9-209ENST00000504634 ZNF804BA4D1E1 1349 aa15.5■□□□□ 0.07
NEDD9-209ENST00000504634 MMP14P50281 582 aa15.5■□□□□ 0.07
NEDD9-209ENST00000504634 PKN2Q16513 984 aaKnown RBP15.5■□□□□ 0.07
NEDD9-209ENST00000504634 TTLL5Q6EMB2 1281 aa15.5■□□□□ 0.07
NEDD9-209ENST00000504634 ARMC9Q7Z3E5 817 aa15.5■□□□□ 0.07
NEDD9-209ENST00000504634 ZNF296Q8WUU4 475 aaPredicted RBP15.5■□□□□ 0.07
NEDD9-209ENST00000504634 HPS5Q9UPZ3 1129 aa15.5■□□□□ 0.07
NEDD9-209ENST00000504634 PAPPA2Q9BXP8 1791 aa15.49■□□□□ 0.07
NEDD9-209ENST00000504634 H7C1W4 665 aa15.49■□□□□ 0.07
NEDD9-209ENST00000504634 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
NEDD9-209ENST00000504634 ITGA6P23229 1130 aa15.49■□□□□ 0.07
NEDD9-209ENST00000504634 SREBF2Q12772 1141 aa15.49■□□□□ 0.07
NEDD9-209ENST00000504634 PRKG1Q13976 671 aa15.49■□□□□ 0.07
NEDD9-209ENST00000504634 TWISTNBQ3B726 338 aaPredicted RBP15.49■□□□□ 0.07
NEDD9-209ENST00000504634 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
NEDD9-209ENST00000504634 APOBEC3FQ8IUX4 373 aaKnown RBP15.49■□□□□ 0.07
NEDD9-209ENST00000504634 KIAA0825Q8IV33 1275 aa15.49■□□□□ 0.07
NEDD9-209ENST00000504634 GTF2IP78347 998 aa15.48■□□□□ 0.07
NEDD9-209ENST00000504634 G2E3Q7L622 706 aa15.48■□□□□ 0.07
NEDD9-209ENST00000504634 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
NEDD9-209ENST00000504634 PDE4DIPQ5VU43 2346 aa15.48■□□□□ 0.07
NEDD9-209ENST00000504634 POLR2AP24928 1970 aaKnown RBP15.47■□□□□ 0.07
NEDD9-209ENST00000504634 KLRK1P26718 216 aa15.47■□□□□ 0.07
NEDD9-209ENST00000504634 TM4SF4P48230 202 aa15.47■□□□□ 0.07
NEDD9-209ENST00000504634 PTPN12Q05209 780 aaKnown RBP15.47■□□□□ 0.07
NEDD9-209ENST00000504634 GCKRQ14397 625 aa15.47■□□□□ 0.07
NEDD9-209ENST00000504634 GPR25O00155 361 aa15.46■□□□□ 0.07
NEDD9-209ENST00000504634 FKBP5Q13451 457 aaPredicted RBP15.46■□□□□ 0.07
NEDD9-209ENST00000504634 DLGAP5Q15398 846 aa15.46■□□□□ 0.07
NEDD9-209ENST00000504634 PLA2G12BQ9BX93 195 aa15.46■□□□□ 0.07
NEDD9-209ENST00000504634 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.46■□□□□ 0.07
NEDD9-209ENST00000504634 ANGEL1Q9UNK9 670 aaKnown RBP15.46■□□□□ 0.07
NEDD9-209ENST00000504634 ANKRD18BA2A2Z9 1011 aa15.45■□□□□ 0.06
NEDD9-209ENST00000504634 CHRNDQ07001 517 aa15.45■□□□□ 0.06
NEDD9-209ENST00000504634 FLIIQ13045 1269 aa15.45■□□□□ 0.06
NEDD9-209ENST00000504634 FKTNO75072 461 aa15.44■□□□□ 0.06
NEDD9-209ENST00000504634 CCDC27Q2M243 656 aa15.44■□□□□ 0.06
NEDD9-209ENST00000504634 NOM1Q5C9Z4 860 aaKnown RBP15.44■□□□□ 0.06
NEDD9-209ENST00000504634 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
NEDD9-209ENST00000504634 DNAAF4Q8WXU2 420 aa15.44■□□□□ 0.06
NEDD9-209ENST00000504634 DEFB129Q9H1M3 183 aa15.44■□□□□ 0.06
NEDD9-209ENST00000504634 CD209Q9NNX6 404 aa15.44■□□□□ 0.06
NEDD9-209ENST00000504634 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
NEDD9-209ENST00000504634 MYO1BO43795 1136 aa15.43■□□□□ 0.06
NEDD9-209ENST00000504634 PPP1R12BO60237 982 aaPredicted RBP15.43■□□□□ 0.06
NEDD9-209ENST00000504634 ALDH1A1P00352 501 aa15.43■□□□□ 0.06
NEDD9-209ENST00000504634 CSF1RP07333 972 aa15.43■□□□□ 0.06
NEDD9-209ENST00000504634 LDLRAD1Q5T700 205 aa15.43■□□□□ 0.06
NEDD9-209ENST00000504634 PRPF38BQ5VTL8 546 aaKnown RBP15.43■□□□□ 0.06
NEDD9-209ENST00000504634 SPRYD7Q5W111 196 aa15.43■□□□□ 0.06
NEDD9-209ENST00000504634 FBXO46Q6PJ61 603 aaPredicted RBP15.43■□□□□ 0.06
NEDD9-209ENST00000504634 LINS1Q8NG48 757 aa15.43■□□□□ 0.06
NEDD9-209ENST00000504634 SLC10A4Q96EP9 437 aa15.43■□□□□ 0.06
NEDD9-209ENST00000504634 ZBED3Q96IU2 234 aaPredicted RBP15.43■□□□□ 0.06
NEDD9-209ENST00000504634 AKAP11Q9UKA4 1901 aa15.43■□□□□ 0.06
NEDD9-209ENST00000504634 F8W031 263 aaPredicted RBP15.42■□□□□ 0.06
NEDD9-209ENST00000504634 TAF5LO75529 589 aa15.42■□□□□ 0.06
NEDD9-209ENST00000504634 CASP7P55210 303 aa15.42■□□□□ 0.06
NEDD9-209ENST00000504634 IFIT5Q13325 482 aaKnown RBP15.42■□□□□ 0.06
NEDD9-209ENST00000504634 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
NEDD9-209ENST00000504634 HELBQ8NG08 1087 aaPredicted RBP15.42■□□□□ 0.06
NEDD9-209ENST00000504634 FZD1Q9UP38 647 aa15.42■□□□□ 0.06
NEDD9-209ENST00000504634 SNAP23O00161 211 aa15.41■□□□□ 0.06
NEDD9-209ENST00000504634 INHBEP58166 350 aa15.41■□□□□ 0.06
NEDD9-209ENST00000504634 VEZTQ9HBM0 779 aa15.41■□□□□ 0.06
NEDD9-209ENST00000504634 IL16Q14005 1332 aa15.41■□□□□ 0.06
NEDD9-209ENST00000504634 CLRN2A0PK11 232 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 MANSC4A6NHS7 340 aaPredicted RBP15.4■□□□□ 0.06
NEDD9-209ENST00000504634 RBM5P52756 815 aaKnown RBP eCLIP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms