RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 ATRNO75882 1429 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 ARAP2Q8WZ64 1704 aa11.66□□□□□ -0.54
COL1A1-210ENST00000504289 WDR19Q8NEZ3 1342 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 STX6O43752 255 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 RPS6KA4O75676 772 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 CYP21A2P08686 494 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 HSPD1P10809 573 aaKnown RBP11.65□□□□□ -0.54
COL1A1-210ENST00000504289 IGHMBP2P38935 993 aaKnown RBP11.65□□□□□ -0.54
COL1A1-210ENST00000504289 PKP1Q13835 747 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 DHX32Q7L7V1 743 aaKnown RBP11.65□□□□□ -0.54
COL1A1-210ENST00000504289 RGS22Q8NE09 1264 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 MPHOSPH8Q99549 860 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 LLPHQ9BRT6 129 aaKnown RBP11.65□□□□□ -0.54
COL1A1-210ENST00000504289 NYXQ9GZU5 481 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 USP21Q9UK80 565 aa11.65□□□□□ -0.54
COL1A1-210ENST00000504289 NHSQ6T4R5 1651 aa11.65□□□□□ -0.55
COL1A1-210ENST00000504289 MAST3O60307 1309 aa11.64□□□□□ -0.55
COL1A1-210ENST00000504289 SYT1P21579 422 aa11.64□□□□□ -0.55
COL1A1-210ENST00000504289 ADORA1P30542 326 aa11.64□□□□□ -0.55
COL1A1-210ENST00000504289 ZNF445P59923 1031 aa11.64□□□□□ -0.55
COL1A1-210ENST00000504289 FKBP4Q02790 459 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL1A1-210ENST00000504289 SYNE4Q8N205 404 aa11.64□□□□□ -0.55
COL1A1-210ENST00000504289 NARFQ9UHQ1 456 aa11.64□□□□□ -0.55
COL1A1-210ENST00000504289 KIF3AQ9Y496 699 aa11.64□□□□□ -0.55
COL1A1-210ENST00000504289 AKAP11Q9UKA4 1901 aa11.64□□□□□ -0.55
COL1A1-210ENST00000504289 ZMYM6O95789 1325 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 MYH7P12883 1935 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 KCNQ2O43526 872 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 NCLP19338 710 aaKnown RBP11.63□□□□□ -0.55
COL1A1-210ENST00000504289 ADD2P35612 726 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 ZAP70P43403 619 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 EVCP57679 992 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 EXOSC10Q01780 885 aaKnown RBP11.63□□□□□ -0.55
COL1A1-210ENST00000504289 TOB2Q14106 344 aaPredicted RBP11.63□□□□□ -0.55
COL1A1-210ENST00000504289 ALX1Q15699 326 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 ME3Q16798 604 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 CCDC102BQ68D86 513 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 SYAP1Q96A49 352 aaPredicted RBP11.63□□□□□ -0.55
COL1A1-210ENST00000504289 TPCN1Q9ULQ1 816 aa11.63□□□□□ -0.55
COL1A1-210ENST00000504289 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
COL1A1-210ENST00000504289 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
COL1A1-210ENST00000504289 F13A1P00488 732 aa11.62□□□□□ -0.55
COL1A1-210ENST00000504289 GJB2P29033 226 aa11.62□□□□□ -0.55
COL1A1-210ENST00000504289 MCAMP43121 646 aa11.62□□□□□ -0.55
COL1A1-210ENST00000504289 IMMTQ16891 758 aaKnown RBP11.62□□□□□ -0.55
COL1A1-210ENST00000504289 NOL8Q76FK4 1167 aaKnown RBP11.62□□□□□ -0.55
COL1A1-210ENST00000504289 CCDC83Q8IWF9 413 aa11.62□□□□□ -0.55
COL1A1-210ENST00000504289 LINC00116Q8NCU8 138 aa11.62□□□□□ -0.55
COL1A1-210ENST00000504289 GTF3C6Q969F1 213 aa11.62□□□□□ -0.55
COL1A1-210ENST00000504289 OSBP2Q969R2 916 aa11.62□□□□□ -0.55
COL1A1-210ENST00000504289 ZNF274Q96GC6 653 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-210ENST00000504289 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-210ENST00000504289 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
COL1A1-210ENST00000504289 A0A0G2JS52 829 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 E7EWF7 191 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 PFKFB2O60825 505 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 PRPF40AO75400 957 aaKnown RBP11.61□□□□□ -0.55
COL1A1-210ENST00000504289 HCLS1P14317 486 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-210ENST00000504289 CPA1P15085 419 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 ADRA2BP18089 450 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 HMGN5P82970 282 aaKnown RBP11.61□□□□□ -0.55
COL1A1-210ENST00000504289 MAP3K12Q12852 859 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 UBE4AQ14139 1066 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 WASHC4Q2M389 1173 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 CCDC129Q6ZRS4 1044 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-210ENST00000504289 GNL3LQ9NVN8 582 aaKnown RBP11.61□□□□□ -0.55
COL1A1-210ENST00000504289 BSDC1Q9NW68 430 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-210ENST00000504289 NDUFB9Q9Y6M9 179 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
COL1A1-210ENST00000504289 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
COL1A1-210ENST00000504289 SEMA3EO15041 775 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 PHF14O94880 888 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 LARGE1O95461 756 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 GNAT2P19087 354 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 SCARF1Q14162 830 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 LARP1BQ659C4 914 aaKnown RBP11.6□□□□□ -0.55
COL1A1-210ENST00000504289 Q6ZUG5 572 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 ANKRD18AQ8IVF6 992 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 SPATA5Q8NB90 893 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-210ENST00000504289 TRPC5Q9UL62 973 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-210ENST00000504289 MTMR6Q9Y217 621 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 BTAF1O14981 1849 aa11.6□□□□□ -0.55
COL1A1-210ENST00000504289 M0R2C6 588 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 GPAA1O43292 621 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 DHX16O60231 1041 aaKnown RBP11.59□□□□□ -0.55
COL1A1-210ENST00000504289 ZPR1O75312 459 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 LETM1O95202 739 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-210ENST00000504289 PHKA1P46020 1223 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 FGD1P98174 961 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 SLC9C2Q5TAH2 1124 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 TPTE2Q6XPS3 522 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 SMARCC2Q8TAQ2 1214 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 SETDB2Q96T68 719 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 MTA3Q9BTC8 594 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 GRPEL1Q9HAV7 217 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 RTCBQ9Y3I0 505 aaKnown RBP11.59□□□□□ -0.55
COL1A1-210ENST00000504289 LY75O60449 1722 aa11.59□□□□□ -0.55
COL1A1-210ENST00000504289 ZNF804BA4D1E1 1349 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms