RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 LEMD3Q9Y2U8 911 aa15.18■□□□□ 0.02
MED28-203ENST00000503945 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
MED28-203ENST00000503945 FAM155AB1AL88 458 aaPredicted RBP15.17■□□□□ 0.02
MED28-203ENST00000503945 CASP7P55210 303 aa15.17■□□□□ 0.02
MED28-203ENST00000503945 DGKZQ13574 1117 aa15.17■□□□□ 0.02
MED28-203ENST00000503945 BEND3Q5T5X7 828 aa15.17■□□□□ 0.02
MED28-203ENST00000503945 C2orf69Q8N8R5 385 aa15.17■□□□□ 0.02
MED28-203ENST00000503945 GBA2Q9HCG7 927 aaPredicted RBP15.17■□□□□ 0.02
MED28-203ENST00000503945 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
MED28-203ENST00000503945 CCT4P50991 539 aaKnown RBP15.16■□□□□ 0.02
MED28-203ENST00000503945 IFIT5Q13325 482 aaKnown RBP15.16■□□□□ 0.02
MED28-203ENST00000503945 SLC4A10Q6U841 1118 aa15.16■□□□□ 0.02
MED28-203ENST00000503945 AGBL3Q8NEM8 1001 aa15.16■□□□□ 0.02
MED28-203ENST00000503945 ASTN2O75129 1339 aaPredicted RBP15.16■□□□□ 0.02
MED28-203ENST00000503945 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
MED28-203ENST00000503945 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
MED28-203ENST00000503945 WTIPA6NIX2 430 aaPredicted RBP15.15■□□□□ 0.02
MED28-203ENST00000503945 E9PSI1 815 aa15.15■□□□□ 0.02
MED28-203ENST00000503945 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
MED28-203ENST00000503945 KIF4BQ2VIQ3 1234 aa15.15■□□□□ 0.02
MED28-203ENST00000503945 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
MED28-203ENST00000503945 CHMP3Q9Y3E7 222 aa15.15■□□□□ 0.02
MED28-203ENST00000503945 AKAP11Q9UKA4 1901 aa15.15■□□□□ 0.02
MED28-203ENST00000503945 ALDH1L1O75891 902 aa15.14■□□□□ 0.01
MED28-203ENST00000503945 USP17L8P0C7I0 530 aa15.14■□□□□ 0.01
MED28-203ENST00000503945 KCNJ4P48050 445 aa15.14■□□□□ 0.01
MED28-203ENST00000503945 ZNF157P51786 506 aaPredicted RBP15.14■□□□□ 0.01
MED28-203ENST00000503945 RSBN1LQ6PCB5 846 aaPredicted RBP15.14■□□□□ 0.01
MED28-203ENST00000503945 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
MED28-203ENST00000503945 SRCIN1Q9C0H9 1055 aa15.14■□□□□ 0.01
MED28-203ENST00000503945 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
MED28-203ENST00000503945 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
MED28-203ENST00000503945 GRM8O00222 908 aa15.13■□□□□ 0.01
MED28-203ENST00000503945 FOXO4P98177 505 aa15.13■□□□□ 0.01
MED28-203ENST00000503945 CCDC57Q2TAC2 916 aa15.13■□□□□ 0.01
MED28-203ENST00000503945 ZNF804BA4D1E1 1349 aa15.13■□□□□ 0.01
MED28-203ENST00000503945 TRPA1O75762 1119 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 ZNF280AP59817 542 aaPredicted RBP15.12■□□□□ 0.01
MED28-203ENST00000503945 SCARF1Q14162 830 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 TAF7LQ5H9L4 462 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 LMBR1LQ6UX01 489 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 SULF1Q8IWU6 871 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 OGFOD1Q8N543 542 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 CDCA5Q96FF9 252 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 CSRNP1Q96S65 589 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 RNF186Q9NXI6 227 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 GGA3Q9NZ52 723 aa15.12■□□□□ 0.01
MED28-203ENST00000503945 PSME4Q14997 1843 aa15.11■□□□□ 0.01
MED28-203ENST00000503945 CHRNDQ07001 517 aa15.11■□□□□ 0.01
MED28-203ENST00000503945 SLFN5Q08AF3 891 aa15.11■□□□□ 0.01
MED28-203ENST00000503945 TTLL5Q6EMB2 1281 aa15.11■□□□□ 0.01
MED28-203ENST00000503945 FBXW7Q969H0 707 aa15.11■□□□□ 0.01
MED28-203ENST00000503945 GMLQ99445 158 aa15.11■□□□□ 0.01
MED28-203ENST00000503945 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 SLC34A2O95436 690 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 SLC10A3P09131 477 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 MMP14P50281 582 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 STRIP1Q5VSL9 837 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 ANGEL2Q5VTE6 544 aaKnown RBP15.1■□□□□ 0.01
MED28-203ENST00000503945 LDHAL6AQ6ZMR3 332 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 TXNRD3Q86VQ6 643 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
MED28-203ENST00000503945 SAGE1Q9NXZ1 904 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 SCAF8Q9UPN6 1271 aaKnown RBP15.1■□□□□ 0.01
MED28-203ENST00000503945 MED23Q9ULK4 1368 aa15.1■□□□□ 0.01
MED28-203ENST00000503945 TAF5LO75529 589 aa15.09■□□□□ 0.01
MED28-203ENST00000503945 HELBQ8NG08 1087 aaPredicted RBP15.09■□□□□ 0.01
MED28-203ENST00000503945 MYOZ2Q9NPC6 264 aa15.09■□□□□ 0.01
MED28-203ENST00000503945 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
MED28-203ENST00000503945 PLIN1O60240 522 aa15.08■□□□□ 0
MED28-203ENST00000503945 EPHA10Q5JZY3 1008 aa15.08■□□□□ 0
MED28-203ENST00000503945 DACT2Q5SW24 774 aa15.08■□□□□ 0
MED28-203ENST00000503945 SSH1Q8WYL5 1049 aa15.08■□□□□ 0
MED28-203ENST00000503945 PTPRCP08575 1304 aa15.08■□□□□ 0
MED28-203ENST00000503945 MYO3BQ8WXR4 1341 aa15.08■□□□□ 0
MED28-203ENST00000503945 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
MED28-203ENST00000503945 GTF2IP78347 998 aa15.07■□□□□ 0
MED28-203ENST00000503945 PRAMEF18Q5VWM3 479 aa15.07■□□□□ 0
MED28-203ENST00000503945 MOB2Q70IA6 237 aa15.07■□□□□ 0
MED28-203ENST00000503945 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
MED28-203ENST00000503945 ZNF594Q96JF6 807 aaPredicted RBP15.07■□□□□ 0
MED28-203ENST00000503945 CD209Q9NNX6 404 aa15.07■□□□□ 0
MED28-203ENST00000503945 HDAC9Q9UKV0 1011 aa15.07■□□□□ 0
MED28-203ENST00000503945 SPEF2Q9C093 1822 aa15.06■□□□□ 0
MED28-203ENST00000503945 ALDH1L2Q3SY69 923 aa15.06■□□□□ 0
MED28-203ENST00000503945 C15orf52Q6ZUT6 534 aaKnown RBP15.06■□□□□ 0
MED28-203ENST00000503945 RASAL3Q86YV0 1011 aa15.06■□□□□ 0
MED28-203ENST00000503945 MXD3Q9BW11 206 aa15.06■□□□□ 0
MED28-203ENST00000503945 ZNF609O15014 1411 aa15.06■□□□□ 0
MED28-203ENST00000503945 MYH3P11055 1940 aa15.05■□□□□ 0
MED28-203ENST00000503945 TNRC18O15417 2968 aaPredicted RBP15.05■□□□□ 0
MED28-203ENST00000503945 UBE2Q2LH0YL09 131 aa15.05■□□□□ -0
MED28-203ENST00000503945 SNAP23O00161 211 aa15.05■□□□□ -0
MED28-203ENST00000503945 KLRK1P26718 216 aa15.05■□□□□ -0
MED28-203ENST00000503945 NBPF9Q3BBW0 867 aa15.05■□□□□ -0
MED28-203ENST00000503945 ZNF804AQ7Z570 1209 aa15.05■□□□□ -0
MED28-203ENST00000503945 UTYO14607 1347 aa15.04■□□□□ -0
MED28-203ENST00000503945 PITPNM2Q9BZ72 1349 aa15.04■□□□□ -0
MED28-203ENST00000503945 CT47B1P0C2W7 299 aaPredicted RBP15.04■□□□□ -0
MED28-203ENST00000503945 FKBP1BP68106 108 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms